Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10l15
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   3.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   3.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   6.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -2

Query: 325 LITQLQQFTITYIFNYN-AFYQLIKT 251
           L+ Q     IT+I+ YN  F  LI T
Sbjct: 212 LVLQTINLQITFIWTYNDLFVMLIST 237


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -2

Query: 325 LITQLQQFTITYIFNYN-AFYQLIKT 251
           L+ Q     IT+I+ YN  F  LI T
Sbjct: 212 LVLQTINLQITFIWTYNDLFVMLIST 237


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 185 LLLVLVFYLNCQFVRPVI*FFYWP 114
           LLL    +L    V+P+I F+Y P
Sbjct: 114 LLLKHNLFLLDNIVKPIIAFYYKP 137


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +2

Query: 77  EVFNKTMNNYSALANKKIKLLDAQIDNLNKKQEQEVKEHEL 199
           E+FN    N +    K    +  +  N +  QE   K HE+
Sbjct: 213 EIFNGKRKNPNGCDIKATFFVSHKYTNYSAVQEMHRKGHEI 253


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 121 IGQGTIIVHC 92
           +  GT+IVHC
Sbjct: 523 VAGGTLIVHC 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,918
Number of Sequences: 336
Number of extensions: 1511
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)