Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10l10
         (426 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.            30   2.8  
AF161352-1|AAF28912.1|  290|Homo sapiens HSPC089 protein.              30   2.8  
AK022607-1|BAB14126.1|  773|Homo sapiens protein ( Homo sapiens ...    29   6.6  

>AF272390-1|AAF78783.1| 1742|Homo sapiens myosin 5c protein.
          Length = 1742

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 92   SYVNMTVEKKQNTSSLEHLYNDFDQWISDYNDIHNIQSALQKHRQKENTQFTTTVENKRL 271
            SY    V  + +   LEHL  D + W + Y  +      L+ H Q +   +   +E    
Sbjct: 1113 SYDIEDVRSRLSVEDLEHLNEDGELWFA-YEGLKKATRVLESHFQSQKDCYEKEIEALNF 1171

Query: 272  QII-LNNDIALILYRTKNRNHIN 337
            +++ L+ +I  +    +  N IN
Sbjct: 1172 KVVHLSQEINHLQKLFREENDIN 1194


>AF161352-1|AAF28912.1|  290|Homo sapiens HSPC089 protein.
          Length = 290

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 92  SYVNMTVEKKQNTSSLEHLYNDFDQWISDYNDIHNIQSALQKHRQKENTQFTTTVENKRL 271
           SY    V  + +   LEHL  D + W + Y  +      L+ H Q +   +   +E    
Sbjct: 166 SYDIEDVRSRLSVEDLEHLNEDGELWFA-YEGLKKATRVLESHFQSQKDCYEKEIEALNF 224

Query: 272 QII-LNNDIALILYRTKNRNHIN 337
           +++ L+ +I  +    +  N IN
Sbjct: 225 KVVHLSQEINHLQKLFREENDIN 247


>AK022607-1|BAB14126.1|  773|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12545 fis, clone NT2RM4000611, weakly similar to
           VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
          Length = 773

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 209 LQKHRQKENTQFTTTVENKRLQIILNNDIALILYRTKNRNHINTDGLF 352
           L KHRQ+++ +   T+EN+ +Q+ L  +I  I        H+     F
Sbjct: 699 LGKHRQQQDEKLNETLENELVQLPLTENIPAISEHLHTPAHVLPSAAF 746


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,154,378
Number of Sequences: 237096
Number of extensions: 641870
Number of successful extensions: 1888
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)