Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10l05
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P2N4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q0VR02 Cluster: Cell division protein ZipA; n=1; Alcani...    34   3.3  
UniRef50_Q5GYA2 Cluster: Putative uncharacterized protein; n=7; ...    33   4.3  
UniRef50_Q5QNM5 Cluster: Putative uncharacterized protein P0451C...    33   4.3  
UniRef50_Q00Z26 Cluster: [R] KOG2238 Uncharacterized conserved p...    33   5.7  
UniRef50_Q7S491 Cluster: Predicted protein; n=1; Neurospora cras...    33   5.7  
UniRef50_Q4CX70 Cluster: Putative uncharacterized protein; n=5; ...    33   7.5  
UniRef50_UPI0000F2AEC6 Cluster: PREDICTED: hypothetical protein;...    32   10.0 
UniRef50_Q3JK04 Cluster: Putative uncharacterized protein; n=4; ...    32   10.0 
UniRef50_Q4DB33 Cluster: Poly(ADP-ribose) polymerase, putative; ...    32   10.0 
UniRef50_Q9Y4N2 Cluster: Putative uncharacterized protein DKFZp4...    32   10.0 
UniRef50_Q2HCN1 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 

>UniRef50_Q4P2N4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 655

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 351 PHCRSASALWATAAREQHPAS-CRRPASNKTSYGLMPFHVTLDGSPPL 211
           P   +A+A  A AA++  PAS  R   + +TS G    HVT DGSP L
Sbjct: 529 PATDTAAAAVAAAAKDAEPASPLRSTRAEETSSGGSKSHVTSDGSPKL 576


>UniRef50_Q0VR02 Cluster: Cell division protein ZipA; n=1;
           Alcanivorax borkumensis SK2|Rep: Cell division protein
           ZipA - Alcanivorax borkumensis (strain SK2 / ATCC 700651
           / DSM 11573)
          Length = 306

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 246 ALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQRHA---QPRV 404
           A   SLF  + G+   P  A EPQ   A  P+ SAV R P +T   R A   +PR+
Sbjct: 94  AEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRI 149


>UniRef50_Q5GYA2 Cluster: Putative uncharacterized protein; n=7;
           Xanthomonas|Rep: Putative uncharacterized protein -
           Xanthomonas oryzae pv. oryzae
          Length = 631

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +3

Query: 294 PDVAREPQSPTARRPSGSAVARAPPTTRFQRHAQPRVSELLRRFEPAPMQ 443
           PD A  P +     P+ SA A   PT    +HAQP       +  PAP Q
Sbjct: 382 PDPAPAPVAVAPAVPAASATANPTPTAAAVQHAQPAPQPAQSQANPAPPQ 431


>UniRef50_Q5QNM5 Cluster: Putative uncharacterized protein
           P0451C06.34; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0451C06.34 - Oryza sativa subsp. japonica (Rice)
          Length = 188

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 463 ARGGRKYCIGAGSKRRKSSETRGC-ACRWKRVVGGA 359
           A GGR+   G  ++RR++   RG    RWKR VGGA
Sbjct: 38  ALGGRRASAGRWAERRRAPGARGAEGGRWKRSVGGA 73


>UniRef50_Q00Z26 Cluster: [R] KOG2238 Uncharacterized conserved
           protein TEX2; n=1; Ostreococcus tauri|Rep: [R] KOG2238
           Uncharacterized conserved protein TEX2 - Ostreococcus
           tauri
          Length = 632

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +3

Query: 294 PDVAREPQSPTARRPSGSAVARAPPTTRFQRHAQPRVS 407
           PDV  E  SP+A RPS  A+A +PP  +F R   P  S
Sbjct: 499 PDVFAE--SPSATRPSLDALATSPPAEQFMRSPPPSPS 534


>UniRef50_Q7S491 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 275

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +3

Query: 207 PPTEDFRRVLREKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQR 386
           P + D   V  E +L++  F+  L A   P     P SP+      S     P ++R+ R
Sbjct: 58  PTSSDAHTVAAEGSLTYVFFFQSLSA---PAYESAPTSPSYAAAQESKPGPPPSSSRYTR 114

Query: 387 HAQPRVSE 410
           HA P+ ++
Sbjct: 115 HADPQPNQ 122


>UniRef50_Q4CX70 Cluster: Putative uncharacterized protein; n=5;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 618

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 177 TEITMPRLENPPTEDFRRV-LREKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSG-SA 350
           T + + +LE+P  E  RR+ +RE+ +  ++FY+         +  E Q  T   P G S+
Sbjct: 174 TRVPVIQLEDPRGEALRRIRMREEEMREAIFYVPPRRSYATSLGTERQLKTRSPPRGSSS 233

Query: 351 VARAPPTTRFQRH 389
            A  P +    RH
Sbjct: 234 PAPRPNSQPLPRH 246


>UniRef50_UPI0000F2AEC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 438

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -3

Query: 381 GSGLSAARAPPHCR----SASALWATAAREQHPASCRRPASNKTSYGLMPFHVTLDGSPP 214
           G+  +A  APP  R    +A+A  A  AR  HPA   RPA   +    +P     DG P 
Sbjct: 258 GAPAAARLAPPGGRRESEAAAAAVAAEARSPHPA---RPAPRVSEVSRLPLGPARDGDP- 313

Query: 213 LGGFPG 196
            GG PG
Sbjct: 314 -GGDPG 318


>UniRef50_Q3JK04 Cluster: Putative uncharacterized protein; n=4;
            Burkholderia|Rep: Putative uncharacterized protein -
            Burkholderia pseudomallei (strain 1710b)
          Length = 1041

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 291  TPDVAREPQSPTARRPSGSAVARAP 365
            TPD A  P SP+A R + SA ARAP
Sbjct: 1009 TPDTAPRPPSPSAARRAASARARAP 1033


>UniRef50_Q4DB33 Cluster: Poly(ADP-ribose) polymerase, putative;
           n=5; Trypanosoma|Rep: Poly(ADP-ribose) polymerase,
           putative - Trypanosoma cruzi
          Length = 604

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -3

Query: 369 SAARAPPHCRSASALWATAAREQHPASCRRPASNKTS---YGLMP-FHVTLDGSPPLGGF 202
           SA R  P  + ASA+    A ++  A+ + PA+NK S     L P  + T+   P +G  
Sbjct: 25  SAVRKAPAAKKASAVRKAPAAKKASAAKKAPAANKASAARKALFPAVNNTVKIIPAMGAA 84

Query: 201 PGAASLSP 178
           P AA+  P
Sbjct: 85  PAAATAPP 92


>UniRef50_Q9Y4N2 Cluster: Putative uncharacterized protein
           DKFZp434A062; n=1; Homo sapiens|Rep: Putative
           uncharacterized protein DKFZp434A062 - Homo sapiens
           (Human)
          Length = 183

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +3

Query: 177 TEITMPRLENPPTEDFRRVLREKALSHSLFYLKLGA--GMTPDVAREPQSPTARRPSGSA 350
           T  T P + N P    R V +EKA+SH L  L  G+  G    + R   S     P    
Sbjct: 50  TRSTAPSIPNGPDSQ-RGVRKEKAISHRLILLAPGSSTGRRVGLCRHDGSVVREGPPPMC 108

Query: 351 VARAPP 368
           + R PP
Sbjct: 109 LGRGPP 114


>UniRef50_Q2HCN1 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1141

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +3

Query: 168 LYFTEITMPRLENPPTEDFRRVLREKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGS 347
           L+F  ++      PP  D   ++R+ A  + +F++  G     +V +EPQSPT RR + +
Sbjct: 293 LHFLGLSAQPKSYPPFTD---IIRQGAPGNDIFFIVRGEA---EVVQEPQSPTLRRTTRA 346

Query: 348 AVAR 359
             +R
Sbjct: 347 TYSR 350


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,773,496
Number of Sequences: 1657284
Number of extensions: 11223136
Number of successful extensions: 41927
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41880
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)