Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10l05
         (632 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.093
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   6.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   8.1  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 29.5 bits (63), Expect = 0.093
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 237 REKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQ-RHAQPRVS 407
           R++ + +SL   K+G G      R+P +P  RR S     +     R Q    QPR S
Sbjct: 179 RDRDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRAS 236


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = -2

Query: 256 WLNAFSRNTRRKSSVGGFSRRGIVISVKYNRLPNKRLL---IILSLFAHFSSYLRYMCSL 86
           W+   +    ++  V   + +GI + V Y   P K +L   + L L   F  Y  ++   
Sbjct: 220 WVELNATQAMQRWVVERVANKGIFVEVYYAESPRKEILPHEVGLILSNRFGRYQPFLVGY 279

Query: 85  C 83
           C
Sbjct: 280 C 280


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 370 QPASNDTRNHVSPSSCVASNP 432
           QP ++D  NH + S+    NP
Sbjct: 438 QPPTSDAPNHTTTSTTTEGNP 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,821
Number of Sequences: 2352
Number of extensions: 12004
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)