Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k21
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   3.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   7.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 375 NYYNNLIDGLLKNNIEPVITIYHYELP 455
           NYYN   D      + P  + YHYE P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 375 NYYNNLIDGLLKNNIEPVITIYHYELP 455
           NYYN   D      + P  + YHYE P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 375 NYYNNLIDGLLKNNIEPVITIYHYELP 455
           NYYN   D      + P  + YHYE P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 372 RNYYNNLIDGLLKNNIEPV---ITIYHYELPQVFQDLGGWTNPLIVDWFADYASVVYSLF 542
           R +++ L+   +K    P+   +T  ++   Q  ++   W N +I  +      V  +LF
Sbjct: 145 RKFFDELLFKCMKEKWIPLCNSVTFSNFGYKQCVENRK-WQNKVIQKFLWTGGLVTSALF 203

Query: 543 ADRVKIWL 566
           A  ++IWL
Sbjct: 204 AYGLRIWL 211


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 372 RNYYNNLIDGLLKNNIEPV---ITIYHYELPQVFQDLGGWTNPLIVDWFADYASVVYSLF 542
           R +++ L+   +K    P+   +T  ++   Q  ++   W N +I  +      V  +LF
Sbjct: 378 RKFFDELLFKCMKEKWIPLCNSVTFSNFGYKQCVENRK-WQNKVIQKFLWTGGLVTSALF 436

Query: 543 ADRVKIWL 566
           A  ++IWL
Sbjct: 437 AYGLRIWL 444


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 372 RNYYNNLIDGLLKNNIEPV---ITIYHYELPQVFQDLGGWTNPLIVDWFADYASVVYSLF 542
           R +++ L+   +K    P+   +T  ++   Q  ++   W N +I  +      V  +LF
Sbjct: 378 RKFFDELLFKCMKEKWIPLCNSVTFSNFGYKQCVENRK-WQNKVIQKFLWTGGLVTSALF 436

Query: 543 ADRVKIWL 566
           A  ++IWL
Sbjct: 437 AYGLRIWL 444


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 171 SHLYH*HSMRPRSDTTTNP 115
           +H +H HS   RSD T  P
Sbjct: 174 THFWHSHSGFQRSDGTFGP 192


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 190 LMNIQRKWLTAAMVTSPATPTTFGGGTSK 276
           L N+QR+    +  T P+  + F  G S+
Sbjct: 88  LQNLQRQQAAMSAATDPSVVSKFRAGFSE 116


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 228 GDVACDSYNLWR 263
           G+ ACD Y  W+
Sbjct: 518 GEAACDPYRPWQ 529


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,414
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)