Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k21
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 142 3e-34
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 31 0.61
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.61
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 31 0.61
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 31 1.1
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 31 1.1
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 30 1.4
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80444-10|AAB37792.2| 362|Caenorhabditis elegans Lethal protein... 29 4.3
AC024785-9|ABQ40025.1| 359|Caenorhabditis elegans C-type lectin... 29 4.3
AC024785-8|ABQ40024.1| 359|Caenorhabditis elegans C-type lectin... 29 4.3
AC024785-7|ABQ40023.1| 359|Caenorhabditis elegans C-type lectin... 29 4.3
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 28 5.7
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 28 7.6
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 28 7.6
AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin... 28 7.6
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 142 bits (343), Expect = 3e-34
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 11/222 (4%)
Frame = +3
Query: 78 LEKTFPLNFKFGAGSSSYQIEGAWNVSDKGESIQDRYAHEHPEKVVDGSNGDVACDSYNL 257
L FP NFK +++YQIEGA +++ +G S D E P +++D S+ D++CD
Sbjct: 3 LATKFPKNFKLATATAAYQIEGAKDLNGRGFSTWDAIRLE-PGRILDNSDPDLSCDGLLK 61
Query: 258 WRRDIEMATELGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNLIDGLLKNNIEPVITI 437
++ D+ + E+G+ +YRFSISW R+LP G + I+E+G +Y +L L +NNIEPV+T+
Sbjct: 62 YKEDVALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTL 121
Query: 438 YHYELPQVFQDLG-GWTNPLIVDWFADYASVVYSLFADRVKIWLTVNEPLIICDV--SYI 608
+H+++P D G W N + F +A + + F D VK W+T NE I C S +
Sbjct: 122 FHFDMPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYNE--INCQAWGSIV 179
Query: 609 GISA--------PGLYSPDHGLFLCNKHVLLAHAKAWRLYDE 710
+ P + + + ++LL HAK +R YD+
Sbjct: 180 KVEGEFWLCPERPEIENHKQAPYFGAANMLLTHAKIYRNYDQ 221
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 132 bits (320), Expect = 2e-31
Identities = 70/220 (31%), Positives = 119/220 (54%), Gaps = 9/220 (4%)
Frame = +3
Query: 78 LEKTFPLNFKFGAGSSSYQIEGAWNVSDKGESIQDRYAHEHPEKVVDGSNGDVACDSYNL 257
L FP NF+ +++YQIEGA N+ +G S D E+ ++ D S+ D++C+
Sbjct: 3 LPTKFPKNFQLATATAAYQIEGAKNLDGRGFSTWDSIRSENG-RIHDNSDPDLSCEGRLK 61
Query: 258 WRRDIEMATELGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNLIDGLLKNNIEPVITI 437
++ D+ + +++G+ YRFSISW R+LP G I+EDG +Y ++ L N IEP++T+
Sbjct: 62 YKEDVALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTL 121
Query: 438 YHYELPQVFQDLG-GWTNPLIVDWFADYASVVYSLFADRVKIWLTVNEPLIICDVSYIGI 614
+H+++P D G W N + F +A + + F D VK W+T NE + S + I
Sbjct: 122 FHFDMPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFNEINMQAWSSVVKI 181
Query: 615 SA--------PGLYSPDHGLFLCNKHVLLAHAKAWRLYDE 710
P + + + ++ ++LL HAK +R Y +
Sbjct: 182 EGELWLCPDRPEIENHEQAPYIAATNMLLTHAKIYRNYQK 221
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DGSNGD-VACDSYNLWRRDIEMATELGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNL 392
DG++ D VA D Y +W+++ +L + H ++ WP L P+ ++ + + L
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTH---ALEWPSLSVQWLPDVAKDNSDHTIHRL 62
Query: 393 IDG 401
I G
Sbjct: 63 ILG 65
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DGSNGD-VACDSYNLWRRDIEMATELGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNL 392
DG++ D VA D Y +W+++ +L + H ++ WP L P+ ++ + + L
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTH---ALEWPSLSVQWLPDVAKDNSDHTIHRL 62
Query: 393 IDG 401
I G
Sbjct: 63 ILG 65
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DGSNGD-VACDSYNLWRRDIEMATELGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNL 392
DG++ D VA D Y +W+++ +L + H ++ WP L P+ ++ + + L
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTH---ALEWPSLSVQWLPDVAKDNSDHTIHRL 62
Query: 393 IDG 401
I G
Sbjct: 63 ILG 65
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 48 VYANAPVRRPLEKTFPLNFKFGAGSSSYQIEGAWNVSDK-GESIQDRYAHEHPEKVVDGS 224
VY N P+ R EK ++ + Y+ +W+V++ G Q H PE V++GS
Sbjct: 257 VYGNIPLLRMDEKLAQRTYEPPVVMTMYKTVNSWSVANSYGSYRQMTGTHGRPEIVIEGS 316
Query: 225 N 227
+
Sbjct: 317 H 317
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 48 VYANAPVRRPLEKTFPLNFKFGAGSSSYQIEGAWNVSDK-GESIQDRYAHEHPEKVVDGS 224
VY N P+ R EK ++ + Y+ +W+V++ G Q H PE V++GS
Sbjct: 520 VYGNIPLLRMDEKLAQRTYEPPVVMTMYKTVNSWSVANSYGSYRQMTGTHGRPEIVIEGS 579
Query: 225 N 227
+
Sbjct: 580 H 580
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 227 IAAVNHFLWMFMSIAILYALTFITDIPCALDLIRRRTRSKLKVQRKCLLQRSSNWGICVD 48
I+ +HF+ + + L D A+D+ + TRS+ +C N GIC+D
Sbjct: 677 ISGTHHFIGCMADVRVDGDLIIFADNKRAIDIRKGCTRSE-----QCTRAYCQNEGICID 731
Query: 47 QW 42
W
Sbjct: 732 HW 733
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 411 NNIEPVITIYHYELPQVF 464
NNI P ++ YH +LPQ+F
Sbjct: 84 NNIRPELSFYHSQLPQLF 101
>U80444-10|AAB37792.2| 362|Caenorhabditis elegans Lethal protein
381 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 235 SPATPTTFGGGTSKWPLNWDWIIIDSPFH 321
SP P FG GT+++P+ W D P++
Sbjct: 253 SPIYPNYFGYGTAEFPMQWASPTYDWPYY 281
>AC024785-9|ABQ40025.1| 359|Caenorhabditis elegans C-type lectin
protein 75, isoform c protein.
Length = 359
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 315 ISWPRLLPSGYPNYISEDGRNYY 383
+SW LP GY N+ S G NY+
Sbjct: 99 LSWDNGLPVGYTNFGSHVGENYF 121
>AC024785-8|ABQ40024.1| 359|Caenorhabditis elegans C-type lectin
protein 75, isoform b protein.
Length = 359
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 315 ISWPRLLPSGYPNYISEDGRNYY 383
+SW LP GY N+ S G NY+
Sbjct: 99 LSWDNGLPVGYTNFGSHVGENYF 121
>AC024785-7|ABQ40023.1| 359|Caenorhabditis elegans C-type lectin
protein 75, isoform a protein.
Length = 359
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 315 ISWPRLLPSGYPNYISEDGRNYY 383
+SW LP GY N+ S G NY+
Sbjct: 99 LSWDNGLPVGYTNFGSHVGENYF 121
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 312 SISWPRLLPSGYPNYISEDGRNYYNNLI 395
S+SW LP Y N+ + G+NY+ I
Sbjct: 99 SLSWDNGLPVAYTNFGTNVGKNYFTESI 126
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 336 PSGYPNYISEDGRNYYNNLIDGLLKNNIEPVITIYHYEL-PQVFQDLGGWTNP 491
P+ +PN +D N Y+++ D + NI V + HY+ P F + TNP
Sbjct: 277 PNRHPNEPPQDDENIYDHIPD-VSGGNIYEVPSRDHYDFPPDAFNEEPPKTNP 328
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 336 PSGYPNYISEDGRNYYNNLIDGLLKNNIEPVITIYHYEL-PQVFQDLGGWTNP 491
P+ +PN +D N Y+++ D + NI V + HY+ P F + TNP
Sbjct: 277 PNRHPNEPPQDDENIYDHIPD-VSGGNIYEVPSRDHYDFPPDAFNEEPPKTNP 328
>AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin
protein 74 protein.
Length = 467
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 288 LGLDHYRFSISWPRLLPSGYPNYISEDGRNYYNNLI 395
L D S+SW P Y N+ S G+NY++ I
Sbjct: 90 LSRDPVSKSLSWDNGFPVTYTNFGSHVGKNYFSEKI 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,026,316
Number of Sequences: 27780
Number of extensions: 364924
Number of successful extensions: 1057
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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