Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k20
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.5  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 257 DIHTPDELAGLTPEQADQLRAEWSRELARVEDEIATLRTVL 379
           DI+T +ELA  T     +++  +S   AR+  +I +  T L
Sbjct: 246 DIYTREELAQRTKLTEARIQVWFSNRRARLRKQITSAATPL 286


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 116 FYVCSTLISQALLVKIVTNIELW 48
           +++C+T+IS  +   ++  +E+W
Sbjct: 158 YHICNTVISATVCFMMLLMLEIW 180


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 116 FYVCSTLISQALLVKIVTNIELW 48
           +++C+T+IS  +   ++  +E+W
Sbjct: 154 YHICNTVISATVCFMMLLMLEIW 176


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 1    D*RLKIVLYQNFIPTYHNSILVTIFTKSAWLISVLHT*KFCVLL 132
            D R+K+V+    I      I   IFT+  W+ S++H  K    L
Sbjct: 1147 DERIKLVIKAIIIMILSGCI---IFTEGIWICSLIHRKKIVKFL 1187


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 494 YQKTESVIKTTAEKTSSIIGGITAG 568
           + KTE  +  T +KT+S+   +  G
Sbjct: 316 HNKTEIFLNITGDKTNSVFEHVKLG 340


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 510 DSVFWYTWL 484
           DS+ W+TW+
Sbjct: 471 DSLLWHTWM 479


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 297 SGVRPANSSGVCMSPATPVPDIASS 223
           S   P +SSG+    A P P   SS
Sbjct: 17  SAATPISSSGMTSPAAAPPPATTSS 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,509
Number of Sequences: 336
Number of extensions: 3000
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)