Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k20
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 73 3e-13
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 33 0.22
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 32 0.50
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 30 2.0
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 2.7
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_59222| Best HMM Match : Filament (HMM E-Value=0.95) 29 4.7
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 29 4.7
SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3) 29 4.7
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 28 6.2
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_9715| Best HMM Match : F5_F8_type_C (HMM E-Value=2.4e-22) 28 6.2
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3) 28 8.1
SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3) 28 8.1
SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Frame = +2
Query: 335 LARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQK---- 502
L +E+EI TL+ L K Q +DLKR+LGIT W +I E + V++S+ Y K
Sbjct: 73 LRHIEEEITTLKQALARKENQLADLKRELGITAWSQIKEGLGNTYHGVQQSRAYNKLSQG 132
Query: 503 ---TESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIE 622
T+ V+ +EKT S + ++ + KLG++R S SF+S E
Sbjct: 133 ASATKVVLVDASEKTVSAVKTASSATAKKLGEIRQSNSFQSFE 175
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +2
Query: 296 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKN 475
E+ +R E+ ++++ + L+ Q+K R+ + L T E +ED+ L++
Sbjct: 2819 ERLSAIRDHPIGEIQQMKEHVIALQE--QAKRREKELHAQLLAKTRQLEQSEDITDSLRD 2876
Query: 476 VKESQVYQKTESVIKTTAEKT-SSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYE-- 646
+S+V QKT+ +E+T S + A +++ ++ ++ + ++E A E
Sbjct: 2877 AIDSEVAQKTDLTNTLNSERTLVSDLKNALAREKARISELGSALEKQRVQESTAKAGELQ 2936
Query: 647 NVKGKVASRSNS 682
V G V R+ +
Sbjct: 2937 EVPGLVIGRTTA 2948
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 299 QADQLRAEWSRELARV-EDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKN 475
Q +QL E RE+ ++ + + LRT ++ +LK KL VW E E+ + +
Sbjct: 113 QKEQLHREKEREIIQIIKQKDDALRTAQHEWAKEREELKGKLRAEVWSEAKEEAKKDSER 172
Query: 476 VK 481
K
Sbjct: 173 EK 174
>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1922
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/84 (25%), Positives = 42/84 (50%)
Frame = +2
Query: 212 VQTAEEAMSGTGVAGDIHTPDELAGLTPEQADQLRAEWSRELARVEDEIATLRTVLQSKI 391
V+ + + G++GD+ L+ + + + R WSREL R D+ TL +LQ
Sbjct: 585 VRRSYNTLKKVGLSGDLDNSHMLSVIERKMSADDRKVWSRELER--DKKTTLEGLLQ--- 639
Query: 392 RQSSDLKRKLGITVWKEITEDVNQ 463
+S++K ++ T ++ + V +
Sbjct: 640 WMTSEMKSRMRATAAEKSMQQVRK 663
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +2
Query: 299 QADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNV 478
+AD+LRAE + R+E EI L+ ++ +L++KL V + +++ + +
Sbjct: 157 EADELRAELKSNIERLEGEIEGKNKALEEAKKRIDELEQKLLANVPVDTAKEIQTYREKI 216
Query: 479 KESQVYQ 499
+ + Q
Sbjct: 217 NDLEKTQ 223
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Frame = +2
Query: 221 AEEAMSGTGVAGDIHTPD--ELAGLTPEQADQL-RAEWSRELARVEDEIATLRTVLQSKI 391
A+ M + ++ +P E GL L R E +E+EI + L+
Sbjct: 94 ADTDMDAPSIGSEVGSPIPFEEGGLDSYDIANLERNELKTRNRDLEEEITAKKAALKQIS 153
Query: 392 RQSSDLKRKL--------GITVWKEITEDVNQGLKNVKESQ 490
R+++DLK KL G V K++T V + +N+K Q
Sbjct: 154 RENTDLKSKLELLMKDQSGAAVIKDLTRQVEELRENLKAKQ 194
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.5 bits (63), Expect = 2.7
Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Frame = +2
Query: 272 DELAGLTP--EQADQLRAEWSRELARVEDEI-ATLRTV--LQSKIRQSSDLKRKLGITVW 436
DE AG+ EQA Q+ + ++++RVED++ A+ + + +Q + +Q+ ++ T+
Sbjct: 961 DEHAGMASSLEQAQQIAQQSKQDISRVEDKLEASQKKISQIQQEKQQTEEMLHTANSTI- 1019
Query: 437 KEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRS 616
+ E ++Q + ++ ++ ES++ ++ I + KL + R S +++
Sbjct: 1020 DSLNEQLSQMTRADALTKAREQHESILNAARKRQEEEI----LRLKQKLDESRLSLDWKT 1075
Query: 617 IEERVGSAYENVKGKVASRSNST 685
E KG + +R T
Sbjct: 1076 EESNRLRDEVLEKGDIINRLTKT 1098
>SB_59222| Best HMM Match : Filament (HMM E-Value=0.95)
Length = 411
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +2
Query: 263 HTPDELAGLTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKE 442
H +E+ + Q+R + S++ + ++ L+ KIR+ +L +KL I ++
Sbjct: 281 HKLEEVTAEKEAEKQQIREDLSKKYDELRFHKDSVIAKLKDKIREKIELNKKLNIEHKEK 340
Query: 443 ITEDVNQGLKNVKESQVYQKTESVIK 520
+ V + K + E E +K
Sbjct: 341 LGNTVKEHKKAINELNERLSNEIALK 366
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +2
Query: 224 EEAMSGTGVAGDIHTPDELAGLTPEQADQLRAE-WSRELARVEDEIATLRTVLQSKIRQS 400
E+A A + D + + +++D R E W +E+ + +DE R + K RQ
Sbjct: 117 EKAKEAALKAREKREKDRIKYIKKQESDLKRREQWQKEMKQKKDEQVDEREKQREKQRQE 176
Query: 401 SDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEK 535
++ ++ + I + ++ K +ES ++ +S+ K EK
Sbjct: 177 KIMREQMSRKIKLRIVQKRSEDDKR-QESNHNKRKKSMKKIREEK 220
>SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3)
Length = 274
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +2
Query: 224 EEAMSGTGVAGDIHTPDELAGLTPEQADQLRAE-WSRELARVEDEIATLRTVLQSKIRQS 400
E+A A + D + + +++D R E W +E+ + +DE R + K RQ
Sbjct: 121 EKAKEAALKAREKREKDRIKYIKKQESDLKRREQWQKEMKQKKDEQVDEREKQREKHRQE 180
Query: 401 SDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEK 535
++ ++ + I + ++ K +ES ++ +S+ K EK
Sbjct: 181 KIMREQMSRKIKLRIVQKRSEDDKR-QESNHNKRKKSMKKIREEK 224
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 272 DELAGLTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGIT 430
+ L T + A+ LR +E +DEI TLR +L + R++S + KL T
Sbjct: 519 ENLLARTSQSAENLR----KERNAFDDEIETLRQMLADRTRRNSQTEDKLSGT 567
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 287 LTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED---V 457
+T ++ D+L+++ + L ++E+ ++ +L ++ +LKRK + +E TE+ +
Sbjct: 76 MTEKERDELKSKMNTGL---KEELMEVKNLLSKTKQERDELKRKAATGLKEEFTEELQAL 132
Query: 458 NQGLKNVKESQVYQKTESVIKTTAEKTS 541
N+ ++ +K+ V E K + S
Sbjct: 133 NEKVEKLKDLLVKALLEQEPKVQSRSGS 160
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = +2
Query: 269 PDELAGLTPEQADQLR-------AEWSRELARVEDEIATLRTVLQSKIRQS 400
PDEL G TP A+Q+R + + L E A LRT ++S QS
Sbjct: 987 PDELKGATPSTAEQVRPVKEPDEVQVTTSLIGSSTERAKLRTEIESAYEQS 1037
>SB_9715| Best HMM Match : F5_F8_type_C (HMM E-Value=2.4e-22)
Length = 431
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 427 HGVERDHRGRQSGFEKRQRKPSIPKN*ICDKND 525
HG RG Q+ +KR P +PK+ + K D
Sbjct: 369 HGENMIRRGSQASTQKRNMTPIVPKHVMAPKRD 401
>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
Length = 452
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Frame = +2
Query: 200 NMSGVQTAEEAMSGTGVAGDIHTPDELAGLTPEQADQLRAEWSRELARVEDEIATLRT-- 373
+ +G+ + T + D H+P LT ++A R +++ + ++ +RT
Sbjct: 223 SQNGINVVFQKQDKTSMCRDAHSP---TSLTDDKAHSAREHILKKIKKALVKLGFVRTES 279
Query: 374 ------VLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQ 490
+ + + LKR + W+E+ + NQ L+ Q
Sbjct: 280 SKCAGNASEGVVLEKVHLKRNVRRLAWREVVQLANQKLREPTREQ 324
>SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3)
Length = 866
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +2
Query: 287 LTPEQADQLRA---EWSRELARV--EDEIATLRT---VLQSKIRQSSDLKRKLGITVWKE 442
+TP+Q + LRA EW R V +++ +R Q + R+ ++++L ++
Sbjct: 252 MTPDQVEALRARYREWRRRRKEVMTPEQLEIIRRGNRERQRRRRERLGVRKRLASNQFRG 311
Query: 443 ITEDVNQGLKNVK 481
++ V QG+KN++
Sbjct: 312 ASDAVIQGIKNLQ 324
>SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 311 LRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQ-GLKNVKES 487
LRA+W E+ + D I ++R L+ +LK++ W IT+ + +K
Sbjct: 93 LRAQWETEVKGMADRIISMRQQLR------DNLKKQGSSHDWSHITDQIGMFCFTGMKPD 146
Query: 488 QVYQ--KTESVIKTTAEKTSSIIGGITAG 568
QV + K S+ T + S + G+T+G
Sbjct: 147 QVERLIKEFSIYLTKDGRIS--VAGVTSG 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,063,773
Number of Sequences: 59808
Number of extensions: 372879
Number of successful extensions: 1207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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