Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k18
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 62 6e-10
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 57 2e-08
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 54 9e-08
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 52 5e-07
04_04_0610 + 26590974-26591008,26591111-26591540,26591698-265918... 50 2e-06
02_04_0556 - 23848751-23849158,23850615-23850797,23853644-238539... 48 8e-06
02_05_0091 + 25745971-25746050,25746196-25746439,25746542-257466... 47 2e-05
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 47 2e-05
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698... 46 2e-05
04_03_0100 + 11232801-11232889,11233417-11233624,11233907-112341... 40 0.002
04_04_0608 - 26585436-26585843,26585897-26586091,26586315-265863... 35 0.057
09_01_0170 - 2459344-2459493,2459720-2459784,2459905-2459963,246... 34 0.13
07_03_1589 + 27948546-27948548,27948890-27948958,27949235-279493... 33 0.17
11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053 32 0.40
07_03_1593 + 28001165-28001193,28001214-28001288,28002004-28002796 31 0.93
02_05_0528 - 29782382-29782864,29782994-29783092,29783319-297833... 31 1.2
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 31 1.2
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 30 2.2
03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 30 2.2
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 29 2.8
03_06_0409 + 33725704-33725747,33726905-33727706 29 2.8
07_03_1768 - 29363893-29364010,29364568-29365541 29 3.8
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462... 29 3.8
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 29 5.0
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 29 5.0
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 29 5.0
07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570 28 8.7
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 28 8.7
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 61.7 bits (143), Expect = 6e-10
Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Frame = +2
Query: 59 QKVAIIINGTNILGLAIVKALSEKLNG-TVYFTASDEEEGLKATENFNNIGLYPK-FLLA 232
++VA++ G LGL I K L+ NG TV TA EE G A +GL F
Sbjct: 13 KRVAVVTGGNKGLGLEICKQLAA--NGVTVVLTARSEERGAGAAAALRQLGLSEVLFHQF 70
Query: 233 QITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDF---------------------- 346
+++ + +AD I+ G DIL+NN L DF
Sbjct: 71 DVSEPSSAAGLADFIKHKFGKLDILVNNAGILGVTFDFGNLDLNKAIEGKSANETLEWLM 130
Query: 347 ----PTYEEAKNVIDSKYKSLLIVEQYLFPLLKDS--GRVINVTNAYGHLSNIKNDKWIK 508
T E A+ + Y Q L PLL+ S GR++ V++ +G LS +K +
Sbjct: 131 QHTVETAENAEECLKINYHGNKKTIQALLPLLQSSPDGRIVTVSSVFGQLSFFSGEKLKE 190
Query: 509 TLT-APDLTVEQIDNLFVEEYLRSLENGKFDKK-WFSDDGKIAEYKISMVARTALTFV 676
L L+ E+ID L E ++R ++G+ + + W + A YK S + A T V
Sbjct: 191 ELNDFSKLSEERIDEL-AELFVRDFKDGELESRGWPARADAFAAYKTSKALQHAYTRV 247
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 56.8 bits (131), Expect = 2e-08
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Frame = +2
Query: 59 QKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQI 238
+ VA++ +GLA+ L E TV TA D E G A GL+ F +
Sbjct: 37 ETVAVVTGANRGIGLALAARLGEH-GITVVLTARDAERGEAAAAALRARGLHVVFHRLDV 95
Query: 239 TDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYL 418
D +++ A ++ G DIL+NN D + E A+ V+ + + ++ + L
Sbjct: 96 ADPASVQAFAAWLRDAIGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAKMLTEAL 155
Query: 419 FPLLKDS---GRVINVTNAYGHLSNIKNDKWIKTLTAPD--LTVEQIDNLFVEEYLRSLE 583
PL + S R++N+++ G L+ + +D +K L + LT +++ + +L ++
Sbjct: 156 LPLFRRSPATSRILNISSQLGLLNKV-SDPELKRLLQDEERLTEAEVEGM-ASRFLAQVK 213
Query: 584 NG 589
+G
Sbjct: 214 DG 215
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 54.4 bits (125), Expect = 9e-08
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLL 229
+++ A++ G+ +G AIV+ L+ TV+ A ++ E + E + GL +
Sbjct: 12 SLAGATALVTGGSKGIGRAIVEELAS-FGATVHTCARNQAELSRCQEEWTAKGLAVTVSV 70
Query: 230 AQITDKPALKKIADTIQ-MNHGSFDILINN--TEDLKQCEDFPTYEEAKNVIDSKYKSLL 400
+ + + +A + M G IL+NN T LK D T EE ++ + ++S
Sbjct: 71 CDVAVRADREALAGRVSAMFDGKLSILVNNAGTAYLKPAADL-TPEETSRLMTTNFESCF 129
Query: 401 IVEQYLFPLLKDSGR--VINVTN 463
+ Q +PLLKDSGR ++N+++
Sbjct: 130 HLSQLFYPLLKDSGRGSIVNISS 152
>04_04_0605 + 26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPK-FL 226
T+ +VA++ G +GL + + L+ TV TA DE G++A E +GL F
Sbjct: 969 TLRSRVAVVTGGNKGIGLEVCRQLAAD-GITVVLTARDETRGVEAAEKLRGMGLSCVIFH 1027
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINN 316
++TD ++ ++AD + G +IL+NN
Sbjct: 1028 HLEVTDSSSVSRLADFLTTRFGKLEILVNN 1057
Score = 50.8 bits (116), Expect = 1e-06
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPK---FLLA 232
++A++ G +GL + L+ + V TA +E GL+A + G F
Sbjct: 679 RIALVTGGNKGVGLETCRQLASR-GLRVVLTARNEARGLEAVDGIRRSGAADSDVVFHQL 737
Query: 233 QITDKPALKKIADTIQMNHGSFD---------------ILINNTEDLKQCEDFP------ 349
+TD ++ ++AD ++ G D +L+ +D + D
Sbjct: 738 DVTDAASVARLADFVRDQFGRLDILINNAGISGVDRDPVLVAKVKDQIEGMDVDQRVEWM 797
Query: 350 ------TYEEAKNVIDSKYKSLLIVEQYLFPLL--KDSGRVINVTNAYGHLSNIKNDKWI 505
TY+EAK+ I + Y +V + L PLL SGR++NV++ +G L N ++
Sbjct: 798 RENSKETYDEAKSCITTNYYGAKLVTEALLPLLLLSSSGRIVNVSSGFGLLRNFNSEDLR 857
Query: 506 KTLTAPD-LTVEQIDNLFVEEYLRSLENGKFDKKWFSDDGKIAEYKISMVARTALT 670
K D LT ++++ L ++ +L + + + G A YK++ A A T
Sbjct: 858 KEFDDIDSLTEKRLEEL-LDLFLDDFKVNLIEAHGWPTGGSSA-YKVAKAALNAYT 911
>04_04_0610 +
26590974-26591008,26591111-26591540,26591698-26591892,
26591992-26592372
Length = 346
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +2
Query: 350 TYEEAKNVIDSKYKSLLIVEQYLFPLLKDS--GRVINVTNAYGHLSNIKNDKWIKTLTAP 523
TY+ AKN + + Y V Q L PLL S G+++NV++A G L + N+ K L
Sbjct: 175 TYDTAKNGVQTNYYGAKHVIQGLLPLLLSSSEGKIVNVSSALGLLRFLGNEDLRKELDDI 234
Query: 524 D-LTVEQIDNLFVEEYLRSLENGKFDKKWFSDDGKIAEYKISMVARTALT 670
D LT E++D + + +L+ E G+ + + A YK++ VA A T
Sbjct: 235 DNLTEERLDEV-LASFLKDFEAGELEAHGWPMGS--AAYKVAKVAMNAYT 281
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPK-FL 226
+ S +VA++ G +GL + + L+ TV TA DE G++A E +GL F
Sbjct: 10 SQSARVAVVTGGNKEIGLEVCRQLAAD-GITVVLTARDETRGVEAAERLRGMGLSSVVFH 68
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINN 316
++TD ++ ++AD ++ G DIL ++
Sbjct: 69 QLEVTDSSSVARLADFLKTRFGKLDILASS 98
>02_04_0556 -
23848751-23849158,23850615-23850797,23853644-23853908,
23854019-23854059
Length = 298
Score = 48.0 bits (109), Expect = 8e-06
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 5/211 (2%)
Frame = +2
Query: 59 QKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYP-KFLLAQ 235
+ VA++ +G A+ L+E+ V TA D G A GL +F
Sbjct: 20 ETVAVVTGANRGIGHALAARLAEQ-GLAVVLTARDGARGEAAAAALRARGLRSVRFRRLD 78
Query: 236 ITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQY 415
++D ++ A ++ G DIL+NN D + E A+ V+ + + ++ +
Sbjct: 79 VSDPASVAAFASWLRDELGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAKMLIEA 138
Query: 416 LFPLLKDS---GRVINVTNAYGHLSNIKNDKW-IKTLTAPDLTVEQIDNLFVEEYLRSLE 583
L PL + S R++N+++ G L+ +++ L LT +I+ + +L ++
Sbjct: 139 LLPLFRRSAANSRILNISSQLGLLNKVRDPSLRSMLLDEASLTEGKIERM-ASRFLAEVK 197
Query: 584 NGKFDKKWFSDDGKIAEYKISMVARTALTFV 676
+G + +Y +S +A A + V
Sbjct: 198 DGTWSAPGRGWPAVWTDYAVSKLALNAYSRV 228
>02_05_0091 +
25745971-25746050,25746196-25746439,25746542-25746628,
25747060-25747245,25747527-25747904
Length = 324
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGT-VYFTASDEEEGLKATENFNNIGLYPK-FL 226
M +VA++ G +GL I + L+ NG V TA DE++G +A + GL F
Sbjct: 24 METRVAVVTGGNRGVGLEICRQLAS--NGILVVLTARDEKKGSQAVKALEQSGLSGVIFH 81
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ ++ + + I+ G F+IL+NN
Sbjct: 82 QLDVTDRSSIMLLVEFIRTKFGKFNILVNN 111
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 353 YEEAKNVIDSKYKSLLIVEQYLFPLL--KDSGRVINVTNAYGHLSNIKNDKWIKTLTAPD 526
YE AK ++ + V L PLL +SG+VIN+T+ L I N+ IK L+ D
Sbjct: 155 YEMAKECLEINFYGTKDVTDCLMPLLLLSNSGKVINLTSKISQLQFISNEGVIKVLSDID 214
Query: 527 -LTVEQIDNLFVEEYLRSLENGKFD 598
L+ E++ ++ +L+ ++G +
Sbjct: 215 NLSDEKLKDV-ASIFLKDFKDGNLE 238
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 46.8 bits (106), Expect = 2e-05
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGT-VYFTASDEEEGLKATENFNNI----GLYPKFL 226
+ ++ G N G+ A +G V T+ D G ATE G+ ++
Sbjct: 47 RAVAVVTGAN-RGIGYEAARQLATHGLHVVLTSRDAARGRDATEQIRAAAGKPGVSVEWR 105
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINNT-EDLKQCEDFPTYEEAKNVIDSKYKSLLI 403
+TD +++ A ++ HG +L+NN + + D + E A+ VI++ Y
Sbjct: 106 QLDVTDAASVEGFATWVERTHGGVHVLVNNAGVNFNRGAD-NSVEFAEQVIETNYFGTKR 164
Query: 404 VEQYLFPLLKDS---GRVINVTNAYGHLSNIKNDKWIKTLTAPDLTVEQI-DNLFVEEYL 571
+ + + PL+ S GR++NV++ G ++ +N +L L + + + L E +
Sbjct: 165 MIEAMMPLMITSPHGGRIVNVSSRLGRVNGRRNRIGDPSLRERLLNDDHLSEELINEMVM 224
Query: 572 RSLENGKFDKKWFSDD---GKIAEYKISMVARTALT 670
+ LE K D W S + +Y IS +A A T
Sbjct: 225 KFLEQTKQD-NWSSGNEWPQMYTDYSISKLAVNAYT 259
>07_03_1727 +
29068348-29068571,29069473-29069514,29069593-29069839,
29069936-29070013,29070551-29070736,29070829-29071126,
29071775-29072244
Length = 514
Score = 46.4 bits (105), Expect = 2e-05
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNG-TVYFTASDEEEGLKATENFNNIGLYPKFL 226
T+ +++A++ G +GL + + L+ L G TV TA DE+ G A E+ + +
Sbjct: 85 TIPERLAVVTGGNRGIGLEVCRQLA--LQGVTVILTARDEKRGKDAVESLCHESNLSNII 142
Query: 227 LAQ--ITDKPALKKIADTIQMNHGSFDILINNT---------EDLKQCEDFPTY---EEA 364
Q I D + +A I G DIL+NN + L+ P +A
Sbjct: 143 FHQLDILDGNSRASLARYINSRFGKLDILVNNAGVGGVAVDQDGLRALNIDPRVWLSGKA 202
Query: 365 KNVIDS---------------KYKSLLIVEQYLFPLLKDS---GRVINVTNAYGHLSNIK 490
N+I S Y L + + L PLLK S R++N T+ L I
Sbjct: 203 VNLIQSVIVQTYDEAVKCLNTNYYGLKWITEALLPLLKQSPSGARIVNTTSLRSELKRIP 262
Query: 491 NDKWIKTLTAPDLTVEQIDNLFVEEYLRSLENGKFDK 601
N+K L D+ E + E+L L+N + ++
Sbjct: 263 NEKLRDELRNIDIWDEARIEAMLNEFLLDLKNERLEE 299
>04_03_0100 +
11232801-11232889,11233417-11233624,11233907-11234129,
11234214-11234221
Length = 175
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLL 229
+++ A++ G+ +G AIV+ L+ TV+ A +E E ++ L +
Sbjct: 14 SLAGATALVTGGSKGIGRAIVEELAS-FGATVHTCARNEATLNSCLEEWSAKKLSITSSV 72
Query: 230 AQITDKPALKKIADTIQ-MNHGSFDILINNTEDL--KQCEDFPTYEEAKNVIDSKYKSLL 400
++ + + +A + M G DIL+NN L K + T EE V+ +S
Sbjct: 73 CDVSARADREALAGRVTAMFDGKLDILVNNVGFLFLKPAVNV-TPEELSRVMAGNLESCF 131
Query: 401 IVEQYLFPLLKDSGRVINVTNAYG 472
+ Q + PLLK SG+ NV N G
Sbjct: 132 HLSQLMHPLLKTSGKG-NVVNISG 154
>04_04_0608 -
26585436-26585843,26585897-26586091,26586315-26586389,
26586682-26586742,26587179-26587213
Length = 257
Score = 35.1 bits (77), Expect = 0.057
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Frame = +2
Query: 329 KQCEDFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDS--GRVINVTNAYGHLSNIKNDKW 502
K C TY+ AK + + Y V + L PLL+ S GR++NV +++G L
Sbjct: 72 KNCRQ--TYDAAKAGLKTNYYGTKNVTEALLPLLQSSSDGRIVNVASSFGLLRTADTKDC 129
Query: 503 IKTLT----------APDLTVEQIDNLFVEEYLRSLENGKFDKKWFSDDGKIAEYKISMV 652
++ T A L+ E++D L + ++R E G ++ + + + YK++
Sbjct: 130 MQFFTNEELKRELNDADSLSEERLDEL-LGMFVRDFEAGAVAERGWPTE--FSAYKVAKA 186
Query: 653 ARTA 664
A +A
Sbjct: 187 AMSA 190
>09_01_0170 -
2459344-2459493,2459720-2459784,2459905-2459963,
2460441-2460487,2460793-2460894,2461810-2461935,
2462035-2462169,2463396-2463512,2463583-2463714
Length = 310
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGL-KATENFNNIGLYPKFLLAQI 238
KVA++ T +GLAI + L L G +S +++ + +A G+ ++ +
Sbjct: 11 KVAVVTASTQGIGLAIAERLG--LEGAAVVISSRKKKNVDEAVVGLRAKGITVVGVVCHV 68
Query: 239 TDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEE--AKNVIDSKYKSLLIVEQ 412
+ K + DT N G DI+++N ++ +E + D K+ +++ Q
Sbjct: 69 SIPEQRKNLIDTAVKNFGHIDIVVSNAAANPSVDNILEMKEPILDKLWDINVKASILLLQ 128
Query: 413 YLFPLLKDSGRVINVTNAYGH 475
L+ VI +++ G+
Sbjct: 129 DAAAYLRKGSSVILISSITGY 149
>07_03_1589 +
27948546-27948548,27948890-27948958,27949235-27949335,
27949460-27950173,27951172-27951333,27951669-27952458
Length = 612
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
++ KVA+I G + +G A K E NG A +++ +T +G +
Sbjct: 59 LAGKVAVITGGASGIGKATAKEFIE--NGAKVIMADVQDDLGHSTAA--ELGPDASYTRC 114
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ + D HG DIL NN
Sbjct: 115 DVTDEAQVAAAVDLAVKRHGHLDILYNN 142
Score = 31.1 bits (67), Expect = 0.93
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEE-GLKATENFNNIGLYPKFL 226
+++ KVAII G + +G K + NG A ++E G A +G +
Sbjct: 350 SLAGKVAIITGGASGIGKVTAKEFIK--NGAKVIIADVQDELGHSAAAK---LGPDASYT 404
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ ++ D HG DIL NN
Sbjct: 405 HCDVTDEAQVEAAVDLAVRLHGHLDILYNN 434
>11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053
Length = 139
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +2
Query: 308 INN--TEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDSGR--VINVTNA 466
+NN T LK + T EE +++ + ++S + Q +PLLK SGR +IN+++A
Sbjct: 67 VNNVGTSYLKPAVEL-TLEETSSLMATNFESCFHMSQLAYPLLKASGRGNIINISSA 122
>07_03_1593 + 28001165-28001193,28001214-28001288,28002004-28002796
Length = 298
Score = 31.1 bits (67), Expect = 0.93
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
++ KVA+I G + +G A K NG A D ++ L T +G +
Sbjct: 36 LAGKVAVITGGASGIGEATAKEFIR--NGAKVIIA-DVQDDLGHTVAAE-LGPGSAYTRC 91
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ + D HG DIL NN
Sbjct: 92 DVTDEAQIAATVDLAVARHGHLDILYNN 119
>02_05_0528 -
29782382-29782864,29782994-29783092,29783319-29783387,
29783781-29783888,29783965-29784274,29784772-29784812,
29784886-29784942,29785290-29785448,29785587-29785655,
29785728-29785877,29785967-29786098,29786347-29786433,
29786516-29786686,29786760-29786960,29787348-29787416,
29787510-29787618,29787887-29788005,29788676-29788780,
29789377-29789755,29790022-29790150,29790223-29790402,
29791310-29791469,29791604-29791744,29791832-29792021,
29792100-29792161,29792879-29793107
Length = 1335
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/119 (23%), Positives = 54/119 (45%)
Frame = +2
Query: 215 PKFLLAQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKS 394
P +L +D A +IAD+ Q + S + + T+ ++ + Y A +ID Y+
Sbjct: 427 PNGVLDNTSDASAEAQIADSEQATYASANNDLKGTKAYQESDIPGLYNLAMAIID--YRG 484
Query: 395 LLIVEQYLFPLLKDSGRVINVTNAYGHLSNIKNDKWIKTLTAPDLTVEQIDNLFVEEYL 571
+V Q + P + + ++ YG + N K W ++ + VE L V+E++
Sbjct: 485 HRVVAQSIIPGILQGDKSDSL--LYGSVDNGKKISWNESFHSK--VVEAAKRLHVKEHV 539
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 296 FDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDSGRVINV 457
+ +LI+N E+L PT EA KY S+ Q L+ LKD G+V++V
Sbjct: 172 YKLLIDNVEELLPVVYTPTVGEACQ----KYGSIFRQPQGLYVSLKDKGKVLDV 221
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 5/150 (3%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
++ VA++ + +G AI AL + + A E + G A
Sbjct: 7 LAAPVAVVTGASRGIGRAIAVALGKAGCKVIVNYAKSGMEAEEVCREIEESGGTAITFSA 66
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN---TEDLKQCEDFPTYEEAKNVIDSKYKSLLI 403
++ + ++ + G+ D+L+NN T D T + + V+D + +
Sbjct: 67 DVSIEAEVESMMRAAIDTWGTLDVLVNNAGITRDALLMRMKRT--QWQEVVDVNLTGVYL 124
Query: 404 VEQYL--FPLLKDSGRVINVTNAYGHLSNI 487
Q ++K GR+IN+T+ G + NI
Sbjct: 125 CAQAAAGVMMMKKKGRIINITSVSGIIGNI 154
>03_06_0569 +
34789286-34790052,34791216-34791512,34791604-34791835,
34792334-34792391,34792800-34792931,34793108-34793246,
34793460-34793622,34793693-34793734
Length = 609
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
M KVAI+ G + +G A + L TV +E G + G +++
Sbjct: 1 MDGKVAIVTGGASGIGEAAAR-LFASCGATVVIADVQDELGEAVAASVAGGGC--RYVRC 57
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ ++ HG D++++N
Sbjct: 58 DVTDEAQVEAAVAAAVAEHGRLDVMVSN 85
>06_03_1457 -
30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 194 FNNIGLYPKFLLAQITDKPALKKIADTIQ--MNHGSFDILINNTEDLKQCEDFPTYEEAK 367
F L+ KFL A+ T + + I + + + H S D+L++ QC DF E K
Sbjct: 750 FKAHSLFFKFLYAE-TSEECIVSIVEVLPRILKHSSRDVLLDMKFQWVQCVDFLLLHEMK 808
Query: 368 NVIDS 382
V D+
Sbjct: 809 AVRDA 813
>03_06_0409 + 33725704-33725747,33726905-33727706
Length = 281
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
+ KVA++ G + +G AIV+ E V +E G K ++ F+
Sbjct: 16 LESKVALVTGGASGIGEAIVRLFREH-GAKVCIADIQDEAGQKLRDSLGG-DQDVLFVHC 73
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN 316
++ + + + D G+ DI++NN
Sbjct: 74 DVSVEEDVARAVDATAEKFGTLDIMVNN 101
>07_03_1768 - 29363893-29364010,29364568-29365541
Length = 363
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYP-KFLLAQI 238
KVAI+ G+ +G AIV+A +G + A ++ G A +G + ++ +
Sbjct: 74 KVAIVTGGSRGIGEAIVRAFVH--HGALVVVADIDDAGGHALA--AALGPHACTYVHCDV 129
Query: 239 TDKPALKKIADTIQMNHGSFDILINN 316
++ +++ T HG D+L NN
Sbjct: 130 AEEADVERAVATTLEQHGRLDVLCNN 155
>03_05_0833 -
28045442-28045881,28045961-28046063,28046172-28046203,
28046299-28046516,28046606-28046721,28047757-28048000,
28048423-28048510,28048596-28048667,28048758-28048869,
28049047-28049115,28049627-28049685,28050067-28050325
Length = 603
Score = 29.1 bits (62), Expect = 3.8
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Frame = +2
Query: 206 GLYPKFLLAQITDK-PALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDS 382
G YPK + + ++ P + ++ GS D N D P ++A S
Sbjct: 348 GQYPKNMRDIVKERLPTFTP--EQAKLVKGSADYFGINQYTANYMADQPAPQQAATSYSS 405
Query: 383 KYKSLLIVEQYLFPLLKDSGR---VINVTNAYGHLSNIKNDKWIKTLTAPDLTVEQIDNL 553
+ I ++ P+ + + I T YG ++ IK T+ + ++Q NL
Sbjct: 406 DWHVSFIFQRNGVPIGQQANSNWLYIVPTGMYGAVNYIKEKYNNPTIIISENGMDQSGNL 465
Query: 554 FVEEYLRSLENGKFDKKWFSDDGKIAEYKISMVA 655
EE+L E +F K + ++ K + ++VA
Sbjct: 466 TREEFLHDTERIEFYKNYLTELKKAIDDGANVVA 499
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 296 FDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDSGRVINV 457
+ +LI+N E+L PT EA KY S+ Q L+ LKD G+++ V
Sbjct: 103 YKLLIDNVEELLPVVYTPTVGEACQ----KYGSIYRRPQGLYISLKDKGKILEV 152
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 296 FDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDSGRVINV 457
+ +LI+N E+L PT EA KY S+ Q L+ LKD G+++ V
Sbjct: 12 YKLLIDNVEELLPVVYTPTVGEACQ----KYGSIYRRPQGLYISLKDKGKILEV 61
>01_06_0393 + 28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 110 VKALSEKLNGTVYFTASDEEEGLKATEN 193
VK L +LNG V+ SD E LKA +N
Sbjct: 972 VKFLDNELNGIVHELPSDAAESLKALQN 999
>07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570
Length = 341
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLA 232
++ KVA+I G + +G A K + D+ A E +G +
Sbjct: 79 LAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHAVAAE----LGPDAAYTRC 134
Query: 233 QITDKPALKKIADTIQMNHGSFDILINN 316
+TD+ + D HG D+L NN
Sbjct: 135 DVTDEAQIAAAVDLAVACHGRLDVLHNN 162
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 27.9 bits (59), Expect = 8.7
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 7/148 (4%)
Frame = +2
Query: 65 VAIIINGTNILGLAIVKALSE---KLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQ 235
V ++ + +G AI A + K+ +++D EE K E F + + ++
Sbjct: 71 VVVVTGASRGIGKAIALAFGKAGCKVLVNYARSSTDAEEVCKEIEGFGGQAITFRGDVSN 130
Query: 236 ITDKPALKKIA-DTIQMNHGSFDILINNTEDLKQCEDFPTYEEA-KNVIDSKYKSLLIVE 409
D ++ K A DT G+ D+L+NN + + ++V+D + +
Sbjct: 131 EADVDSMIKAAVDT----WGTIDVLVNNAGITRDTLLLRMKKSQWQDVVDLNLTGVFLCT 186
Query: 410 QYLFPLL--KDSGRVINVTNAYGHLSNI 487
Q ++ K GRVIN+ + G N+
Sbjct: 187 QAATKVMMKKKKGRVINIASVVGLTGNL 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,428,789
Number of Sequences: 37544
Number of extensions: 332763
Number of successful extensions: 779
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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