Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k18
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 42 5e-04
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 41 9e-04
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 38 0.011
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 32 0.41
SB_7138| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_39284| Best HMM Match : WW (HMM E-Value=7.9) 29 3.8
SB_38623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_52549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 29 5.1
SB_22306| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_19526| Best HMM Match : Pentaxin (HMM E-Value=1.7e-10) 29 5.1
SB_32229| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 8.9
SB_6270| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 28 8.9
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/130 (24%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +2
Query: 50 TMSQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLL 229
T + +A + G +G +V+ L ++ +G + TA +E+G A + N +G ++
Sbjct: 20 TNLRPMAEVTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLN-VGGRVEYHK 78
Query: 230 AQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTY-EEAKNVIDSKYKSLLIV 406
+T ++ ++ +Q +G DIL+NN LK+ +Y +A++ + + + +L V
Sbjct: 79 LDVTSNDSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAEDCVKTNFFGMLDV 138
Query: 407 EQYLFPLLKD 436
++PLLK+
Sbjct: 139 YNSMYPLLKE 148
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 41.9 bits (94), Expect = 5e-04
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQIT 241
K+ I + LGLA+ K S + TV + + E + G +F + IT
Sbjct: 3 KIVAITGVSTGLGLALTKWFSSQ-GHTVVGCGRSAAKIAEMNEKYCGKGKPNQFYVVDIT 61
Query: 242 DKPALKKIADTIQMNHGSFDILINNTEDLKQCEDF--PTYEEAKNVIDSKYK-SLLIVEQ 412
D +K+ A + + G D ++NN + Q T EE V+D K S ++
Sbjct: 62 DDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRS 121
Query: 413 YLFPLLK-DSGRVINVTNAYGHLSNIK 490
+L ++K G ++N ++ YG K
Sbjct: 122 FLPKMIKAGKGVIVNFSSGYGKAGKAK 148
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 41.1 bits (92), Expect = 9e-04
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Frame = +2
Query: 56 SQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNI----GLYPKF 223
+Q VA++ LG IV+AL V + E+ K + N++ + K
Sbjct: 11 NQHVALVTGAAKRLGAGIVRALHGSGFRVVIHYNNSGEDAEKIVQEMNSVRSDSAIMLKA 70
Query: 224 LLAQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSL-L 400
L+ + A K I DT+ G D+L+NN E EE N + S
Sbjct: 71 DLSTNIQETARKLIEDTVTA-FGQLDLLVNNASQFCPTESGSVQEETWNKLMGVNLSFPF 129
Query: 401 IVEQYLFPLLKDS-GRVINVTNAY 469
+ Q FP LK S G +IN+ + +
Sbjct: 130 FLSQAAFPHLKRSHGSIINMIDIH 153
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +2
Query: 65 VAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEG---LK-ATENFNNIGLYPKFLLA 232
VAI+ G +GLAI KAL ++ +G V +E+ G LK +EN++ + F+
Sbjct: 7 VAIVTGGVQGIGLAISKALLDR-DGKVCMLDINEKTGNETLKLLSENYSKHRVL--FIKC 63
Query: 233 QITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLI 403
+T +P ++ + G DIL NN + D K +ID K +++
Sbjct: 64 DVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVIL 120
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQIT 241
+VAI+ G + +G A V+ L+ + +V ++E G + + + G KF +
Sbjct: 25 RVAIVTGGASGIGKATVERLARE-GASVAILDINDELGQQVETDLRSSGNKVKFYHVDVA 83
Query: 242 DKPALKKIADTIQMNHGS-FDILINN 316
+K + + +HGS IL+NN
Sbjct: 84 NKDMCAHVVGCVAADHGSAVHILVNN 109
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 341 DFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDS-GRVINVTNAYGHL 478
D+ T ++ + V D LL V + PLLK S GR++NV + G L
Sbjct: 641 DWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCGRIVNVASCAGKL 687
>SB_7138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 432 FSRGNKYCSTINKLLYFESITFLASS*VGKSSHCFK 325
F RG K C TIN L + + FL++S ++ H FK
Sbjct: 133 FRRGVKRCVTINSLAFSQDSLFLSASSNTETVHIFK 168
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +2
Query: 224 LLAQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLI 403
L AQ+ D L+K D ++ ++++I E L++ + E +++KYK L+I
Sbjct: 327 LRAQLADNDDLEKNLDDMRKLESKYELVIIEKEKLER--EIIVLRE----VETKYKLLVI 380
Query: 404 VEQYLFPLLKDSGRVIN 454
++ L LKD +V++
Sbjct: 381 EKEGLERKLKDEQKVVS 397
>SB_39284| Best HMM Match : WW (HMM E-Value=7.9)
Length = 251
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 341 DFPTYEEAKNVIDSKYKSLLIVEQYLFPLLKDSGRVINVTNAYGHLSN 484
+ PT E +N+ ++ S + E LFP++K GR I + Y SN
Sbjct: 181 NLPTLHERRNIACQRFVSRIKPENSLFPIIK--GRRITHDSGYNLRSN 226
>SB_38623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYF---TASDEEEGLKATENFNNIG-LYPK 220
+S++ I +NG + + L +K+ VY T D +E L+ T + ++I P
Sbjct: 23 ISREKGIRVNGLEAQRAKLAERL-DKMWSLVYEIDPTERDWKESLRRTRSESDINKAVPS 81
Query: 221 FLLAQITDKPALKKIADT 274
F L Q +++PA+ + ADT
Sbjct: 82 FPLVQPSNEPAIWQTADT 99
>SB_52549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 505 DPFVILYVRKMTICICDIDDS 443
D +V L++ M CICDI DS
Sbjct: 81 DDYVTLWILPMMFCICDIADS 101
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 170 EGLKAT-ENFNNIGLYPKFLLAQITDKPALKKIADTIQMNHGSFDILINN 316
E LKA + ++G + + K ++K+A+ ++ G+ ILINN
Sbjct: 70 EALKAVAQEIQDLGAETHYFECDVRKKDEVEKVANAVEDQAGNVTILINN 119
>SB_22306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 505 DPFVILYVRKMTICICDIDDS 443
D +V L++ M CICDI DS
Sbjct: 25 DDYVTLWILPMMFCICDIADS 45
>SB_19526| Best HMM Match : Pentaxin (HMM E-Value=1.7e-10)
Length = 274
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 505 DPFVILYVRKMTICICDIDDS 443
D +V L++ M CICDI DS
Sbjct: 11 DDYVTLWILPMMFCICDIADS 31
>SB_32229| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 389
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = -2
Query: 603 FLSNFPFSKLRKYSSTNKLSICSTVKSGAVRVLIHLSFFMFER*PYAFVTLMTLPLSFSR 424
F S + +R S+NKL++ S + + V I LSF + +A ++TL FS
Sbjct: 219 FRSTRRTNSMRLSISSNKLTVTSKARLTKICVTIILSFAL----SWAPTHILTLVYYFSE 274
Query: 423 GNKYCSTINKLLYFESITFLASS*VGKSS--HCFKSSVLFINISKLPW 286
TI ++ F ++ +A S + +C+ S F N K W
Sbjct: 275 MTPESYTIVNMIIFPIVSCVAFSNCALNPLLYCYMSQ-NFRNALKTEW 321
>SB_6270| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 535
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 53 MSQKVAIIINGTNILGLAIVKALSEKLNGTVYF---TASDEEEGLKATENFNNIG-LYPK 220
+S++ I +NG + + L +K+ VY T D +E L+ T + ++I P
Sbjct: 29 ISREKGIRVNGLEAQRAKLAERL-DKMWSLVYEIDPTERDWKESLRRTRSESDINKAVPS 87
Query: 221 FLLAQITDKPALKKIADT 274
F L Q +++PA+ ADT
Sbjct: 88 FPLVQPSNEPAIWLTADT 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,962,340
Number of Sequences: 59808
Number of extensions: 417757
Number of successful extensions: 1050
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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