Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k18
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g59710.1 68416.m06662 short-chain dehydrogenase/reductase (SD... 79 3e-15
At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SD... 66 2e-11
At5g61830.1 68418.m07758 short-chain dehydrogenase/reductase (SD... 66 3e-11
At1g01800.1 68414.m00099 short-chain dehydrogenase/reductase (SD... 56 2e-08
At3g61220.1 68416.m06851 short-chain dehydrogenase/reductase (SD... 54 7e-08
At2g24190.1 68415.m02890 short-chain dehydrogenase/reductase (SD... 54 1e-07
At1g10310.1 68414.m01161 short-chain dehydrogenase/reductase (SD... 41 0.001
At4g20760.1 68417.m03015 short-chain dehydrogenase/reductase (SD... 33 0.15
At1g54870.1 68414.m06265 short-chain dehydrogenase/reductase (SD... 33 0.25
At4g27560.1 68417.m03959 glycosyltransferase family protein cont... 29 2.4
At2g01710.1 68415.m00099 DNAJ heat shock N-terminal domain-conta... 29 4.1
At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein] reduct... 28 5.5
At5g58480.1 68418.m07324 glycosyl hydrolase family 17 protein si... 27 9.6
At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein si... 27 9.6
At5g20750.1 68418.m02466 Ulp1 protease family protein contains P... 27 9.6
>At3g59710.1 68416.m06662 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 302
Score = 79.0 bits (186), Expect = 3e-15
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Frame = +2
Query: 56 SQKVAIIINGTNI-LGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGL-YPKFLL 229
S++ ++ G N +G A+VK L E L TV TA + E G +A E+ IG F
Sbjct: 26 SEETTAVVTGANKGIGFAVVKRLLE-LGLTVVLTARNAENGSQAAESLRRIGFGNVHFCC 84
Query: 230 AQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVE 409
I+D ++ A N G DIL+NN +E + +I + + ++
Sbjct: 85 LDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKLLT 144
Query: 410 QYLFPLLKDS---GRVINVTNAYGHLSNIKNDKWIKTLTAPDLTVEQIDNLFVEEYLRSL 580
+ L PL + S R++N+++ G L+ +++ + L + DLT EQID + ++L+ +
Sbjct: 145 EALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQID-ATLTQFLQDV 203
Query: 581 ENGKFDKKWFSDDGKIAEYKISMVARTALTFV 676
++G ++K+ + ++ +Y IS +A A + V
Sbjct: 204 KSGTWEKQGWPENW--PDYAISKLALNAYSRV 233
>At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 314
Score = 66.5 bits (155), Expect = 2e-11
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Frame = +2
Query: 56 SQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQ 235
S+ VA++ +G +V+ L+ TV T+ DE G++A + G F
Sbjct: 36 SETVAVVTGANRGIGFEMVRQLAGH-GLTVILTSRDENVGVEAAKILQEGGFNVDFHRLD 94
Query: 236 ITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQY 415
I D ++++ + I+ +G D+LINN + E + VI + Y +
Sbjct: 95 ILDSSSIQEFCEWIKEKYGFIDVLINNAGVNYNVGSDNSVEFSHMVISTNYYGTKNIINA 154
Query: 416 LFPLLK---DSGRVINVTNAYGHL----SNIKNDKWIKTLTAPDLTVEQIDNLFVEEYLR 574
+ PL++ R++NVT+ G L S ++N+ L D E+I + V E+L+
Sbjct: 155 MIPLMRHACQGARIVNVTSRLGRLKGRHSKLENEDVRAKLMDVDSLTEEIVDKTVSEFLK 214
Query: 575 SLENGKFDKKWFSDDGKIAEYKISMVARTALTFV 676
+E G ++ + +Y +S +A A T V
Sbjct: 215 QVEEGTWESGGWPH--SFTDYSVSKMAVNAYTRV 246
>At5g61830.1 68418.m07758 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 316
Score = 65.7 bits (153), Expect = 3e-11
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Frame = +2
Query: 59 QKVAIIINGTNILGLAIVKALSEKLNG-TVYFTASDEEEGLKATENFNNI--GLYPKFLL 229
+ VA++ +G I + L+ ++G TV TA + GL+A ++ + GL F
Sbjct: 36 ENVAVVTGSNRGIGFEIARQLA--VHGLTVVLTARNVNAGLEAVKSLRHQEEGLKVYFHQ 93
Query: 230 AQITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVE 409
+TD ++++ ++ G DIL+NN T E A+ VI + Y+ +
Sbjct: 94 LDVTDSSSIREFGCWLKQTFGGLDILVNNAGVNYNLGSDNTVEFAETVISTNYQGTKNMT 153
Query: 410 QYLFPLLKDS---GRVINVTNAYGHL----SNIKNDKWIKTLTAPDLTVEQIDNLFVEEY 568
+ + PL++ S RV+NV++ G + + + N + L++PDL E++ + V ++
Sbjct: 154 KAMIPLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRDQLSSPDLLTEELIDRTVSKF 213
Query: 569 LRSLENGKFDKKWFSDDGKIAEYKISMVARTALT 670
+ +++G ++ + +Y +S +A A T
Sbjct: 214 INQVKDGTWESGGWPQ--TFTDYSMSKLAVNAYT 245
>At1g01800.1 68414.m00099 short-chain dehydrogenase/reductase (SDR)
family protein similar to carbonyl reductase GI:1049108
from [Mus musculus]
Length = 295
Score = 56.0 bits (129), Expect = 2e-08
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 30/235 (12%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNG-TVYFTASDEEEGLKATENFNNIGLYP----KFL 226
+VA++ +G I + L+ NG TV TA DE +GL A + + F
Sbjct: 5 RVAVVTGSNKGIGFEICRQLAN--NGITVVLTARDENKGLAAVQKLKTENGFSDQAISFH 62
Query: 227 LAQITDKPALKKIADTIQMNHGSFDILINN--------TEDLKQCE--------DF---- 346
+++ + +A ++ G DIL+NN D+ + + D
Sbjct: 63 PLDVSNPDTIASLAAFVKTRFGKLDILVNNAGVGGANVNVDVLKAQIAEAGAPTDISKIM 122
Query: 347 -PTYEEAKNVIDSKYKSLLIVEQYLFPLLK--DSGRVINVTNAYGHLSNIKNDKWIKTL- 514
TYE + + + Y + + + + PLL+ DS R++++ + G L N+ N+ W K +
Sbjct: 123 SDTYEIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLENVSNE-WAKGVL 181
Query: 515 -TAPDLTVEQIDNLFVEEYLRSLENGKFDKKWFSDDGKIAEYKISMVARTALTFV 676
A +LT E+ID + + EYL+ + G K + ++ Y +S A ALT V
Sbjct: 182 SDAENLTEEKIDEV-INEYLKDYKEGALQVKGWPT--VMSGYILSKAAVIALTRV 233
>At3g61220.1 68416.m06851 short-chain dehydrogenase/reductase (SDR)
family protein similar to carbonyl reductase GI:1049108
from [Mus musculus]
Length = 296
Score = 54.4 bits (125), Expect = 7e-08
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNN-IGLYPKFLL--- 229
+ A++ +G I + L+ + V T+ DE GL+A E + + + LL
Sbjct: 7 RYAVVTGANRGIGFEICRQLASE-GIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQ 65
Query: 230 AQITDKPALKKIADTIQMNHGSFDILINN---------TEDLKQ---CEDF-------PT 352
+ D ++ +A+ ++ G DIL+NN E L+ E F T
Sbjct: 66 LDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDEIITET 125
Query: 353 YEEAKNVIDSKYKSLLIVEQYLFPLLK--DSGRVINVTNAYGHLSNIKNDKWIKTL--TA 520
YE + I Y + + PLLK DS R++NV+++ G L N+ N+ W K + A
Sbjct: 126 YELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNE-WAKGILSDA 184
Query: 521 PDLTVEQIDNLFVEEYLRSLENGKF-DKKW 607
+LT E+ID + + + L + G +K W
Sbjct: 185 ENLTEERIDQV-INQLLNDFKEGTVKEKNW 213
>At2g24190.1 68415.m02890 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 296
Score = 54.0 bits (124), Expect = 1e-07
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 27/232 (11%)
Frame = +2
Query: 56 SQKVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNN-IGLYPKFLL- 229
S + AI+ G +G I + L+ K V T+ DE++GL+A E + + + ++
Sbjct: 5 SPRYAIVTGGNRGIGFEICRQLANK-GIRVILTSRDEKQGLEAVETLKKELEISDQSIVF 63
Query: 230 --AQITDKPALKKIADTIQMNHGSFDILINNT------------------EDLKQCEDF- 346
++D ++ +A+ ++ + G DILINN E K E
Sbjct: 64 HQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEETIT 123
Query: 347 PTYEEAKNVIDSKYKSLLIVEQYLFPLLK--DSGRVINVTNAYGHLSNIKNDKWIKTL-- 514
TYE A+ I Y + + PLL+ DS R+INV++ G + N+ N+ W K +
Sbjct: 124 ETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNE-WAKGILS 182
Query: 515 TAPDLTVEQIDNLFVEEYLRSLENGKFDKKWFSDDGKIAEYKISMVARTALT 670
A +LT +ID + + + L L+ K+++ ++ Y +S A T
Sbjct: 183 DAENLTEVRIDQV-INQLLNDLKEDTAKTKYWAK--VMSAYVVSKAGLNAYT 231
>At1g10310.1 68414.m01161 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 242
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +2
Query: 71 IIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQITDKP 250
++I G + GL AL G + +E L A ++ + L A +
Sbjct: 20 VLITGVS-KGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSSTNHLLLTADVKSNS 78
Query: 251 ALKKIADTIQMNHGSFDILINNTEDLKQCEDF--PTYEEAKNVIDSKYKSLLIVEQYLFP 424
+++++A TI G DI++NN + + + E+ NV+D+ K + V ++ P
Sbjct: 79 SVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLRHFIP 138
Query: 425 LL--KDSGRVINVTNAYG 472
L+ + G ++N+++ +G
Sbjct: 139 LMLPRKQGIIVNMSSGWG 156
>At4g20760.1 68417.m03015 short-chain dehydrogenase/reductase (SDR)
family protein contains Pfam profile: PF00106 short
chain dehydrogenase
Length = 298
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 65 VAIIINGTNILGLAIVKALSEK-LNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQIT 241
V+++ + +GL V+ L E NG V T + +E ++ N +T
Sbjct: 45 VSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQKLDVT 104
Query: 242 DKPALKKIADTIQMNHGSFDILIN 313
D+ +++ A++++ +GS ++LIN
Sbjct: 105 DETTIEESAESVREKYGSLNLLIN 128
>At1g54870.1 68414.m06265 short-chain dehydrogenase/reductase (SDR)
family protein C-terminal similar to dormancy related
protein GI:1220178 from [Trollius ledebourii]
Length = 288
Score = 32.7 bits (71), Expect = 0.25
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%)
Frame = +2
Query: 62 KVAIIINGTNILGLAIVKALSEKLNGTVYFTASDEEEGLKATENFNNIGLYP----KFLL 229
KVA+I G + +G A+ + + TV FT +E A E + K +
Sbjct: 38 KVALITGGDSGIGRAVGYCFASE-GATVAFTYVKGQEEKDAQETLQMLKEVKTSDSKEPI 96
Query: 230 AQITD---KPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAK--NVIDSKYKS 394
A TD K++ D + G D+LINN + + +E + V + S
Sbjct: 97 AIPTDLGFDENCKRVVDEVVNAFGRIDVLINNAAEQYESSTIEEIDEPRLERVFRTNIFS 156
Query: 395 LLIVEQYLFPLLKDSGRVINVTNAYGHLSN 484
+ ++ +K+ +IN T+ + N
Sbjct: 157 YFFLTRHALKHMKEGSSIINTTSVNAYKGN 186
>At4g27560.1 68417.m03959 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 455
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 470 GHLSNIKNDKWIKTLTAPDLTVEQIDNLFVEEYLRSLENG 589
G+L + KW +TLT+P L +DN F+E L+ L +G
Sbjct: 412 GNLVKKNHTKWRETLTSPGLVTGYVDN-FIES-LQDLVSG 449
>At2g01710.1 68415.m00099 DNAJ heat shock N-terminal
domain-containing protein simlar to AHM1 [Triticum
aestivum] GI:6691467; contains Pfam profile PF00226:
DnaJ domain
Length = 311
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 389 KSLLIVEQYLFPLLKDSGRVINVTNAY---GHLSNIKND-KWIKTLTAPDLTVEQIDNLF 556
K I+ Q PLL+ + +++ V + + IKN W K L DLT DN
Sbjct: 31 KEFAILAQETEPLLEGTDQILAVVDVLLSSAPENRIKNQPNWYKILQIEDLTESSTDNDL 90
Query: 557 VEEYLRSL 580
+++ R L
Sbjct: 91 IKKQYRRL 98
>At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein]
reductase, chloroplast / 3-ketoacyl-acyl carrier protein
reductase identical to 3-oxoacyl-[acyl-carrier protein]
reductase SP:P33207 from [Arabidopsis thaliana]
Length = 319
Score = 28.3 bits (60), Expect = 5.5
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Frame = +2
Query: 65 VAIIINGTNILGLAIVKALSE---KLNGTVYFTASDEEEGLKATENFNNIGLYPKFLLAQ 235
V +I + +G AI AL + K+ +A + EE K E + + +++
Sbjct: 78 VVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSK 137
Query: 236 ITDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEA-KNVIDSKYKSLLIVEQ 412
TD A+ K T G+ D+++NN + + VI + + Q
Sbjct: 138 ATDVDAMMK---TALDKWGTIDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQ 194
Query: 413 YLFPLL--KDSGRVINVTNAYGHLSNI 487
++ K GR+IN+++ G + NI
Sbjct: 195 AAVKIMMKKKRGRIINISSVVGLIGNI 221
>At5g58480.1 68418.m07324 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 476
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 506 KTLTAPDLTVEQIDNLFVEEYLRSLENGKFDKKW--FSDDGKIAEYKIS 646
KT + P VE ++E R+L G F++ W F+ DG+ A+Y S
Sbjct: 297 KTASLPRPPVETYIESLLDEDQRNLSAGNFERHWGVFTFDGQ-AKYNFS 344
>At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 [Nicotiana tabacum]
Length = 501
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +2
Query: 557 VEEYLRSLENGKFDKKW--FSDDGKIAEYKISM 649
V+E +S++ GKF++ W FS DG + +Y +S+
Sbjct: 325 VDEDAKSIDPGKFERHWGIFSYDGAV-KYPLSL 356
>At5g20750.1 68418.m02466 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 944
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +2
Query: 239 TDKPALKKIADTIQMNHGSFDILINNTEDLKQCEDFPTYEEAKNVIDSKYKSLLIVEQYL 418
T KPA + ++ +F L+ D ++C+ + + +ID+ + +LL+
Sbjct: 709 TKKPAYSPLGSLDELEFENFKSLLQEDTDQRRCKSYAL--KRITIIDTWFTALLMTHHED 766
Query: 419 FPLLKDSG 442
F +D G
Sbjct: 767 FMQCQDKG 774
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,057,876
Number of Sequences: 28952
Number of extensions: 304273
Number of successful extensions: 794
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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