Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k17
(643 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase, put... 101 3e-22
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 82 4e-16
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 79 2e-15
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 33 0.12
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 33 0.12
At5g11940.1 68418.m01396 subtilase family protein contains simil... 32 0.37
At3g14190.1 68416.m01793 expressed protein 31 0.49
At5g67290.1 68418.m08484 FAD-dependent oxidoreductase family pro... 30 1.1
At2g13440.1 68415.m01483 glucose-inhibited division family A pro... 30 1.1
At3g10370.1 68416.m01243 glycerol-3-phosphate dehydrogenase, put... 29 2.0
At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical t... 29 2.0
At4g36980.1 68417.m05240 expressed protein 29 3.5
At1g54280.1 68414.m06188 haloacid dehalogenase-like hydrolase fa... 29 3.5
At1g34420.1 68414.m04275 leucine-rich repeat family protein / pr... 29 3.5
At3g63410.1 68416.m07139 chloroplast inner envelope membrane pro... 28 4.6
At5g52490.1 68418.m06512 fibrillarin, putative similar to fibril... 28 6.1
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 28 6.1
At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial... 28 6.1
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 27 8.0
At5g22140.1 68418.m02578 pyridine nucleotide-disulphide oxidored... 27 8.0
At2g24580.1 68415.m02935 sarcosine oxidase family protein simila... 27 8.0
>At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase,
putative similar to S(+)-beta-hydroxybutyryl CoA
dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase)
[Paracoccus denitrificans] GI:12003356; contains Pfam
profiles PF02737: 3-hydroxyacyl-CoA dehydrogenase NAD
binding, PF00725: 3-hydroxyacyl-CoA dehydrogenase
C-terminal
Length = 294
Score = 101 bits (243), Expect = 3e-22
Identities = 57/132 (43%), Positives = 87/132 (65%)
Frame = +3
Query: 243 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 422
+K+V V+G G MGSGIAQ++A +G +V L+D DAL++A +I +++ R K
Sbjct: 4 MKSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISK- 62
Query: 423 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 602
+ G+ D++ R+ ++ + SAD++VEAIVE+ ++K KLFK LDG+A S I AS
Sbjct: 63 EVGD----DAMHRLRLTSNLEDLC-SADIIVEAIVESEDIKKKLFKDLDGIAKSSAILAS 117
Query: 603 NTSSLSINEIAS 638
NTSS+SI +AS
Sbjct: 118 NTSSISITRLAS 129
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 81.8 bits (193), Expect = 4e-16
Identities = 47/143 (32%), Positives = 76/143 (53%)
Frame = +3
Query: 204 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTN 383
V N + IK V VIGGGLMGSGIA + V L +++++ L K KS+ N
Sbjct: 296 VPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEAN 355
Query: 384 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQ 563
+ + + + G+ +L D E + D+V+EA++ENI++K +FK+
Sbjct: 356 MKSLVSRGKLTQDKAGK-----ALSLFKGVLDYTEFN-DVDMVIEAVIENIQLKQNIFKE 409
Query: 564 LDGVAPSHTIFASNTSSLSINEI 632
++ V H I ASNTS++ ++ I
Sbjct: 410 IEKVCSPHCILASNTSTIDLDVI 432
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 79.0 bits (186), Expect = 2e-15
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 243 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNL-SRVAKKMYKDN 419
IK V +IGGGLMGSGIA + V L +V+ L + NL SRV K
Sbjct: 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK-----G 366
Query: 420 PQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFA 599
EKF ++ + + D E+ + D+V+EA++ENI +K ++F L+ P H I A
Sbjct: 367 SMSQEKF-EKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILA 424
Query: 600 SNTSSLSINEI 632
SNTS++ +N+I
Sbjct: 425 SNTSTIDLNKI 435
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 NVTVIGGGLMGSGIAQVSAQAG-QNVTLVDVSNDALAKAKKSIGTNLSRVAKK 404
++ VIG G +GS Q++ G ++ VDV +D L KAK T++ AK+
Sbjct: 248 SIAVIGIGGVGSSCLQIARAFGASDIIAVDVQDDKLQKAKTLGATHIVNAAKE 300
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 NVTVIGGGLMGSGIAQVSAQAG-QNVTLVDVSNDALAKAKKSIGTNLSRVAKK 404
++ VIG G +GS Q++ G ++ VDV +D L KAK T++ AK+
Sbjct: 248 SIAVIGIGGVGSSCLQIARAFGASDIIAVDVQDDKLQKAKTLGATHIVNAAKE 300
>At5g11940.1 68418.m01396 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 762
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 195 KVIVRNFSSSSAMQSAIKNVTVIG-GGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 371
+V V N S A + K + V+ GG G G V A +T+ + D +
Sbjct: 308 EVDVYNQISYGAFHAVAKGIPVLSAGGNFGPGAYTVQNIAPWIITVAATTLDRWYPTPLT 367
Query: 372 IGTNLSRVAKKMYKDNPQEGE 434
+G N++ +A+ YK N +G+
Sbjct: 368 LGNNVTLMARTPYKGNEIQGD 388
>At3g14190.1 68416.m01793 expressed protein
Length = 193
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/101 (24%), Positives = 45/101 (44%)
Frame = +3
Query: 246 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQ 425
K+VT G+ + Q G L D++N + AK + + ++A K+
Sbjct: 23 KSVTAASVKSKGTVLGQ-KKPGGARKALNDITNKSGIHAKAAASSKNKQIASAAVKEIDI 81
Query: 426 EGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKH 548
GE+F++D I + + SADL++ +I+ KH
Sbjct: 82 AGERFLHDHSKCIKEQQNLWDDHYSADLMLLHHGSSIKEKH 122
>At5g67290.1 68418.m08484 FAD-dependent oxidoreductase family
protein contains Pfam profile PF01266: FAD dependent
oxidoreductase
Length = 406
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 201 IVRNFSSSSAMQSAI-----KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAK 365
I N S S A + I K V V GGG++G A A+ G VTLV+ S A A +
Sbjct: 20 ICSNSSKSMAAKKQIGEETSKRVFVCGGGVIGVCTAYFLAKKGIAVTLVEKSAVACAASG 79
Query: 366 KSIG 377
K+ G
Sbjct: 80 KAGG 83
>At2g13440.1 68415.m01483 glucose-inhibited division family A
protein similar to GidA from Pseudomonas syringae
[GI:10764670]; contains Pfam profile PF01134 Glucose
inhibited division protein A
Length = 723
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 144 ILFYKPNL*IDSKMMQF---KVIVRNFSSSS--AMQSAIKNVTVIGGGLMGSGIAQVSAQ 308
I F+ P L + + Q + + +FSSSS A + +V V+G G G A SA+
Sbjct: 34 IPFHSPRLCVFLRPRQLFLNRPLAASFSSSSSGATSDSTYDVIVVGAGHAGCEAALASAR 93
Query: 309 AGQNVTLVDVSNDALA 356
G + L+ ++ D +A
Sbjct: 94 LGASTLLLTLNLDRIA 109
>At3g10370.1 68416.m01243 glycerol-3-phosphate dehydrogenase,
putative similar to glycerol-3-phosphate dehydrogenase
GB:BAA08926 from Mus musculus [SP|Q64521], Homo sapiens
[GI:1020315], Rattus norvegicus [SP|P35571]; contains
Pfam profile PF01266 FAD dependent oxidoreductase
Length = 629
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 249 NVTVIGGGLMGSGIAQVSAQAGQNVTLV---DVSNDALAKAKKSIGTNLSRVAKKMY 410
+V VIGGG GSG+A + G V LV D S+ +++ K I + + K ++
Sbjct: 75 DVLVIGGGATGSGVALDAVTRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVF 131
>At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical to
lycopene beta cyclase GI:1399183|GB:AAB53337
[Arabidopsis thaliana]
Length = 501
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 234 QSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVS 341
+S + ++ ++GGG G +AQ ++AG +V +D S
Sbjct: 79 KSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPS 114
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 SNDALAKAKKSIGTNLSRVAKKMYKDNPQEG-EKFVNDSLGRINTATDAAEASKSAD 506
++ ALAK K GT+ S+ ++ K+ PQE ++ +N L + A E +K +
Sbjct: 406 TSTALAKLSKVAGTSSSKQSQAEKKETPQERLKRIMNKQLTKQIKKDSATETAKKRE 462
>At1g54280.1 68414.m06188 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|O43520], Mus musculus [SP|P70704]; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1240
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 396 AKKMYKDNPQEGEKFVNDSLGRINTATDAAEASK-SADLVVEAIVENIEVKHKLFKQLDG 572
AK+M D ++GE+ N S+ + T A ASK S+D +E +V + K + KQ G
Sbjct: 460 AKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQ--KQNTG 517
Query: 573 V 575
V
Sbjct: 518 V 518
>At1g34420.1 68414.m04275 leucine-rich repeat family protein /
protein kinase family protein contains leucine rich
repeat (LRR) domains, Pfam:PF00560; contains protein
kinase domain, Pfam:PF00069
Length = 966
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 315 QNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATD-AAEA 491
Q +TL+D+S++ L + S NLS++ + +N G + +SL I T AA
Sbjct: 227 QELTLIDLSDNQLNGSIPSSLGNLSKLESLLLSNNYLSG--LIPESLSSIQTLRRFAANR 284
Query: 492 SKSADLVVEAIVENIEVKHKLFKQLDGVAP 581
++ + + +++E F L G P
Sbjct: 285 NRFTGEIPSGLTKHLENLDLSFNSLAGSIP 314
>At3g63410.1 68416.m07139 chloroplast inner envelope membrane
protein, putative (APG1) similar to SP|P23525 37 kDa
inner envelope membrane protein, chloroplast precursor
(E37) {Spinacia oleracea}; contains Pfam profile
PF01209: methlytransferase, UbiE/COQ5 family
Length = 338
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 252 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKK 368
V +GGG + + V +NVT++D S LAKAK+
Sbjct: 114 VVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQ 152
>At5g52490.1 68418.m06512 fibrillarin, putative similar to
fibrillarin from {Xenopus laevis} SP|P22232, {Mus
musculus} SP|P35550, {Homo sapiens} SP|P22087
Length = 292
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 368 LLGFSQSIIADVN---QGNILSCLGRYLGYAGAH*TTSNNRYILDSTLHCRGT*KISYDN 198
L+G I +DVN Q NILS Y +G H S +DST+ ++ +
Sbjct: 200 LVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEK 259
Query: 197 FKLHHFR 177
++ R
Sbjct: 260 LQMEELR 266
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 252 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 392
+ V+GGG G A V A+ G +VTL++ A+ + + IG + R
Sbjct: 269 IAVVGGGPSGLFAALVLAEFGADVTLIE-RGQAVEERGRDIGALVVR 314
>At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial,
putative / ADP/ATP translocase, putative / adenine
nucleotide translocator, putative similar to
mitochondrial ADP,ATP carrier protein SP:P12857 from
[Zea mays]
Length = 379
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 164 LINRFENDAV*SYRKKFFKFLCNAKCYQECNGYWRWSNGLRHSPG 298
+I F A+ K +FK L N K +E +GYW+W G S G
Sbjct: 150 VIRYFPTQALNFAFKDYFKRLFNFK--KEKDGYWKWFAGNLASGG 192
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 434 LSFLGIIFVHLLCDPAEVCANALLGFSQSIIADVNQGNILS 312
L+ + +I HL CDP ++ LL S + ++ N+LS
Sbjct: 133 LTAVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLS 173
>At5g22140.1 68418.m02578 pyridine nucleotide-disulphide
oxidoreductase family protein contains Pfam profile
PF00070 Pyridine nucleotide-disulphide oxidoreductase
domain
Length = 365
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 246 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD 335
K V VIGGG+ GS +A Q VTL+D
Sbjct: 12 KRVVVIGGGIAGS-LAAKLLQFDAEVTLID 40
>At2g24580.1 68415.m02935 sarcosine oxidase family protein similar
to peroxisomal sarcosine oxidase from Homo sapiens
[SP|Q9P0Z9], Oryctolagus cuniculus [SP|P79371], Mus
musculus [SP|Q9D826]
Length = 416
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 249 NVTVIGGGLMGSGIAQVSAQAGQNVTLVD 335
+V V+G G+MGS A A+ GQ L++
Sbjct: 10 DVIVVGAGVMGSSAAYQLAKRGQKTLLLE 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,246,820
Number of Sequences: 28952
Number of extensions: 237167
Number of successful extensions: 650
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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