Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k08
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.61 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 156  GIFKLQCYSWQWCWH 200
            G FK+ CY   W W+
Sbjct: 1396 GYFKIVCYFTNWAWY 1410



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +3

Query: 108  RKLAMTLKNPMQSWVFGIFKLQCYSWQWCWHMECESTLAWPSLL*PTRTTRI 263
            + +  T   P+ +     +K+ CY   W W+ + +     PS + P+  T I
Sbjct: 2303 KPVTTTTSRPIGTDTSDDYKVVCYFTNWAWYRQGDGKYL-PSDIDPSLCTHI 2353



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 162  FKLQCYSWQWCWHME 206
            FK+ CY   W W+ +
Sbjct: 1823 FKVVCYFTNWAWYRQ 1837


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 577 RWWSTWNGSST 609
           R+W+ WNG++T
Sbjct: 114 RYWTCWNGTAT 124


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 429 NGMSMETTELTPSEMMTRIFPPNLAASSPPGICS 328
           +G  +  +  TP++  T  +PPN   S    +CS
Sbjct: 54  HGSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCS 87


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 628 YETRCHKLKSRSKLTTSVNNGAQSAFLF*RNP 533
           Y+    ++KSR KLT   ++G   A  F + P
Sbjct: 551 YKGLIDRIKSREKLTMKFHDGEVDASYFCKLP 582


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 399 TPSEMMTRIFPPNLAASSP 343
           TP +M  R  PP+L+ + P
Sbjct: 16  TPKDMNARYLPPSLSDTRP 34


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 589 TWNGSSTYGIWFHSPVLGLAGNIL 660
           T++ +  YGI F +  LGL G ++
Sbjct: 256 TFSAARFYGIDFSNTFLGLVGAVV 279


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 462 VLAVYSKAYPKDSRTHP 512
           +L  Y + YP+  ++HP
Sbjct: 37  LLYTYRQPYPRQKKSHP 53


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 675 KAPLT*NIAGQPQYWAMKPDA 613
           K P T +  G+  +W++ PD+
Sbjct: 200 KVPRTPDKPGKGSFWSLHPDS 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,750
Number of Sequences: 336
Number of extensions: 4950
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)