Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k08
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 39 8e-04
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 38 0.001
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 37 0.003
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 35 0.010
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 35 0.013
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 34 0.023
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 33 0.041
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 32 0.071
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 32 0.094
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 31 0.12
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.29
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 28 1.2
SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.7
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 26 4.7
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 25 8.2
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 38.7 bits (86), Expect = 8e-04
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Frame = +2
Query: 176 LFLAMVLAYGMRVNISMAIVAMTDKDN---EDSFNWSMQTQSVILSSFFWGYVVLQIPGG 346
L++ L+ +R +S++ T + + + +S ++ L+ F+ GY++ ++P
Sbjct: 89 LWILYFLSCCLRFTVSLSFTMNTAQGHSLIQTLSGYSAHYLALGLALFYVGYIIFEVPSN 148
Query: 347 ELAAKFGGKILVI-ISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGLSQGFTYPSIHNL 523
+ A +I V I L + V + L +G Q+ A R G+++ +P +
Sbjct: 149 LMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRFFLGVAESGLWPGLAYY 208
Query: 524 IGKWVPLEE-KSRLGTIIYAGGQLGTALQLMASGF 625
+ +W + R+G A A+ L+++GF
Sbjct: 209 MSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGF 243
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 38.3 bits (85), Expect = 0.001
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Frame = +2
Query: 302 SSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQ 481
++F+ GY+V + P L +F + + L + + + +A Y G A RVL
Sbjct: 107 TAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYPG----FIALRVLL 162
Query: 482 GLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTAL-QLMASGFIAQ----YWGW 646
G+ + P L +W E+ ++ A LG L MA G + GW
Sbjct: 163 GMMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGLGQILGSCMAYGLAKRTSLPMRGW 222
Query: 647 PAIFYVNGALGAIWTAFYV 703
IF + G L AI+ F +
Sbjct: 223 KLIFIICGVL-AIFLGFVI 240
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 37.1 bits (82), Expect = 0.003
Identities = 25/90 (27%), Positives = 43/90 (47%)
Frame = +2
Query: 308 FFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGL 487
F+ G+V+ QIPG L +F V S + +++ + + AAY + + A R GL
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVAASTALWTII-IFLHCAAY--NFSGLMALRFFLGL 189
Query: 488 SQGFTYPSIHNLIGKWVPLEEKSRLGTIIY 577
+ P++ IG + P E++ L Y
Sbjct: 190 VESSLLPTMEATIGMFFPHSEQALLQPFFY 219
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 35.1 bits (77), Expect = 0.010
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +2
Query: 344 GELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGLSQGFTYPSIHNL 523
G L +G K + ++ + S++ + Y CR L G++ F P+ L
Sbjct: 103 GRLGDIYGHKKMFVLGYIWFCIWSLISGFSYYAKSVIMFDVCRALTGIAPAFLLPNALAL 162
Query: 524 IGK-WVPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQYWGWPAIFYVNGALGAIWTAFY 700
+G+ + P ++K+ + + A G L + SG AQ WP ++ + ++
Sbjct: 163 LGRVYPPGKKKNLIFALFGATAPNGFLLGSVFSGIFAQLSWWPWTYWTTAIVCIVFAIIG 222
Query: 701 VF 706
F
Sbjct: 223 YF 224
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +2
Query: 467 CRVLQGLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQYWGW 646
CR +QGL G ++ +I PL + I+ + G I Q W
Sbjct: 190 CRAIQGLGGGGIISLVNIIISDITPLRTRPMYSGILATAWGAALVAGPIIGGAICQRTTW 249
Query: 647 PAIFYVNGALGAIWTAFYV 703
IF++N G I TA V
Sbjct: 250 RWIFFINLPSGGIATALIV 268
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 33.9 bits (74), Expect = 0.023
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Frame = +2
Query: 290 SVILSSFFWGYVVLQIPGGELAAKFG-GKILVIISLGVNSVVSMLIPLAAYYGGWQAVCA 466
++++S F+ +V+ P L +FG +IL L + +S+ +GG AV
Sbjct: 99 NIMISIFYIPFVLCAFPFSYLYKRFGAARILPFFMLSFGA-MSLCQAAVKNFGGMMAV-- 155
Query: 467 CRVLQGLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTAL-QLMASGFI----A 631
R G+++ P + + + E +R I YA + +A L+A G
Sbjct: 156 -RWFLGMAESAVLPGVVYYLTTFYRRTELARRLAIFYAAANVSSAFGGLLAYGVFHIKGG 214
Query: 632 QYWGWPAIFYVNGALGAIWTAFYVFL 709
+ GW +F + G + A +FL
Sbjct: 215 KLQGWQYLFLIEGGV-TFLCAIVIFL 239
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 33.1 bits (72), Expect = 0.041
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Frame = +2
Query: 308 FFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGL 487
F GY++ Q+PG + ++ + +N + ++ + +A+ R +
Sbjct: 76 FTCGYIIGQLPGSYALQRVPARLWFSV---MNILWGLMTIFSFAVHSVRALMILRFFMAV 132
Query: 488 SQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTA----LQLMASGFI---AQYWGW 646
++ T+ H ++G W E + I A G +GT LQ + GW
Sbjct: 133 AEASTFAGTHYILGAWYKESELCKRAGIFSASGLVGTMFAGYLQTAVHSSLNGKGGLSGW 192
Query: 647 PAIFYVNGALGAIWTAFYVFL 709
+F ++G L + + +FL
Sbjct: 193 RWLFIIDGILTIPLSLYGLFL 213
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 32.3 bits (70), Expect = 0.071
Identities = 31/138 (22%), Positives = 51/138 (36%)
Frame = +2
Query: 278 MQTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQA 457
M S I++++ Q G L+ FG + V+ + N+ ++
Sbjct: 65 MNNASYIVTAYLITNTAFQPLYGRLSDIFGRRPTVVFA---NAAFTLGTFWCGISRSLPE 121
Query: 458 VCACRVLQGLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQY 637
+C R L G+ G + V L E+ I +G +L G IAQ
Sbjct: 122 LCMARALAGIGGGGLGTMSSIISSDIVSLRERGTWQGITNIVWGIGGSLGGPLGGLIAQR 181
Query: 638 WGWPAIFYVNGALGAIWT 691
WGW F+ +G + T
Sbjct: 182 WGWRTAFHFQVPMGILST 199
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 31.9 bits (69), Expect = 0.094
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 308 FFWGYVVLQIPGGELAAKFG-GKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQG 484
F+ GY+V Q PG + F GK + +++ SV+ L A YGG + A R G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFVGLVTFSW-SVIVFLHCCAYNYGG---LIALRFFLG 201
Query: 485 LSQGFTYPSIHNLIGKWVPLEEKSRLGTIIY 577
++ P++ +G + +E++ L + +
Sbjct: 202 FTESCLLPAMEATMGMFFTHQEQAFLQPVFW 232
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 31.5 bits (68), Expect = 0.12
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +2
Query: 182 LAMVLAYGMRVNISMAIVAMTDKDNEDSFNWSMQTQ-SVILSSFFWGYVVLQIPGGELAA 358
L +V A+ + ++ ++VA D F+ T+ ++ILS + + + + L+
Sbjct: 48 LILVSAFALLGPMASSMVAPCLDQIADRFHIQNSTEKALILSIYLLVFAISPMISAPLSE 107
Query: 359 KFGGKILVIISLGVNSVVSMLIPLAAYYGGWQA-VCACRVLQGLSQGFTYPSIHNLIGKW 535
FG ++L L V +V+ ++ +A +A + R L G I
Sbjct: 108 VFGRRML----LQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDL 163
Query: 536 VPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQYWGWPAIFY 661
+E+ + ++ LG + + SGFIA+Y + IF+
Sbjct: 164 FTPDERGKAVAVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFW 205
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 30.3 bits (65), Expect = 0.29
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 575 YAGGQLGTALQLMASGFIAQYWGWPAIFYVNGALGAIWTAFYVFL 709
+A LGTAL SGFI QY P ++YV W + +++
Sbjct: 288 FAAYHLGTALGPSLSGFIVQY--TPHMYYVFYITSTFWIIYLLYV 330
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 265 GILVVLVGHSNDGHANVDSHSICQHHCQE*HCSLKMPNTQDCIGFF 128
G++V LVG H + H HH H S+ +PNT + I F
Sbjct: 460 GLVVNLVGILAFNHGHNHDHGSHHHHSHSNH-SMCLPNTTNDINIF 504
>SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +2
Query: 272 WSMQTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGW 451
W++ +S IL+ ++L++P AK GK+++ SM +PL G W
Sbjct: 274 WNLCPESSILTK----EILLELPKASDVAKSIGKMIL---------TSMFVPLWLLKGIW 320
Query: 452 QAVCACRVLQGLSQGFTYP 508
+A +++ G T P
Sbjct: 321 EAPATAKIIIGSIADVTLP 339
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 4.7
Identities = 29/115 (25%), Positives = 54/115 (46%)
Frame = +2
Query: 101 SVKEVSNDIKKPDAILGIRHLQTAMLFLAMVLAYGMRVNISMAIVAMTDKDNEDSFNWSM 280
SVKE + K +I IR LF + + G++ ++S A++ + N +F ++
Sbjct: 312 SVKESYHSFKHAMSISSIR----LFLFSRLFINCGIQTSLSSAVIFGKARLNLSNFQLTL 367
Query: 281 QTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYG 445
+ SSF +L G + + + + SL V ++S+L+P+A YG
Sbjct: 368 LGMGI--SSF----ALL----GTVIIPYLTEYFQLNSLQVVMIISILLPMAPLYG 412
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 590 LGTALQLMASGFIAQ-YWGWPAIFYVNGALGAI 685
LG + FI Q Y GW +F++N +GA+
Sbjct: 235 LGPIFGPIIGDFICQSYLGWCWVFWINMIMGAV 267
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,402,959
Number of Sequences: 5004
Number of extensions: 78316
Number of successful extensions: 204
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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