Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k07
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 60 2e-09
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 57 2e-08
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 54 9e-08
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 49 4e-06
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 47 2e-05
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 42 5e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 39 0.005
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 38 0.011
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.019
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.019
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.019
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 36 0.033
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 34 0.10
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 34 0.13
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 33 0.23
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.31
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 32 0.53
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.53
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3) 31 1.2
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 30 1.6
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 30 2.2
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 29 2.8
SB_37508| Best HMM Match : S-antigen (HMM E-Value=4.3) 29 2.8
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 28 6.6
SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84) 28 6.6
SB_39886| Best HMM Match : PH (HMM E-Value=0.0007) 28 8.7
SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14) 28 8.7
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 8.7
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 62.9 bits (146), Expect = 2e-10
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Frame = +3
Query: 93 IVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXXX 272
I+GG +P + +S+ CG ++++ VLTAAHC+
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNSSSLP--HICGGNVISPWWVLTAAHCVQDERASNIKLTM 603
Query: 273 XXXXXXXXXXXHE---VNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSN 443
+ V R I H NY++ T D D A+++ +NF + VQP + S+
Sbjct: 604 GEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQ-YVQPVCLPDSD 662
Query: 444 YNLADNQVVWAAGWGSTR-TGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
+ + + GWGST GS L+ V + +N + C Y R IT M C+G
Sbjct: 663 F--PAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 60.9 bits (141), Expect = 1e-09
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQ-GCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
RI GG+ + YP A F + + + CG +++ VLTAAHC++
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPYH 1219
Query: 267 XXXXXXXXXXXXXHEVNRHI---------IHPNYNHRTKDADIAIMRTVLRINFVRNTVQ 419
++ H+ HP ++ RT D+DIA++R + N + V+
Sbjct: 1220 GLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWRTYDSDIALIRLRWKAN-ITEYVR 1278
Query: 420 PARIA-GSNYNLADNQVVWA-AGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRP 593
P + G L + GWG T ++ L+ V +N C++ Y P
Sbjct: 1279 PVCLPNGYQRRLVKPRAKGVMLGWGVTENKRP-SKTLKEAIVPVVNHNACKKAYENETWP 1337
Query: 594 ITANMLCSGW 623
+T+NMLC+G+
Sbjct: 1338 VTSNMLCAGY 1347
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSN-MAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXX 260
++RIVGGT +P + + N + + CG S++ ++TAAHC
Sbjct: 101 NTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKD 160
Query: 261 XXXXXXXXXXXXXXXHE----VNRHIIHPNYN-HRTKDADIAIMRTVLRINFVRNTVQPA 425
+E V R I+HP Y H D D+A+++ + + + V+P
Sbjct: 161 YTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQY-NDRVRPV 219
Query: 426 RIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITAN 605
+ +L +N + +GWG + L V +++ C++ Y+ + +++
Sbjct: 220 CLPSLKEDLEENTQCYISGWGHLQEAGHGPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSR 279
Query: 606 MLCSGW 623
M C+G+
Sbjct: 280 MRCAGY 285
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 59.7 bits (138), Expect = 2e-09
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
SRIVGGT I+ +P A L S N Q+ CG S+++ VLTAAHC++
Sbjct: 28 SRIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 267 XXXXXXXXXXXXXHEVN--RHIIHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQPARIAG 437
++ + I H NY+ + A DIA+++ N V N V +A
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLV-NGVGTVCLAN 143
Query: 438 SNYNLADNQV--VWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANML 611
+N +L ++ + GWGS +G ++L V ++++ C I +ML
Sbjct: 144 NNTHLPVDEFGKCYITGWGSLSSGGAAPDRLMQASVPLVSKSRCDT--GNYTGKIHESML 201
Query: 612 CSG 620
C+G
Sbjct: 202 CAG 204
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +3
Query: 312 VNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGS 491
V R I H NY++ T D D A+++ +NF + VQP + S++ + + GWGS
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQ-YVQPVCLPDSDF--PAGTLCYVTGWGS 427
Query: 492 TR-TGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
T GS L+ V + +N + C Y R IT M C+G
Sbjct: 428 TNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 54.4 bits (125), Expect = 9e-08
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 9/187 (4%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXX 263
+SRIVGG +P A +F + + + Q CG ++++ V+TA+HCI
Sbjct: 208 ASRIVGGNDAMHGEWPWQAMLMFQTPLG-YKQFCGGALVHEDWVVTASHCINDIRPEDYK 266
Query: 264 XXXXXXXXXXXXXXHEVNRHI------IHPNYN---HRTKDADIAIMRTVLRINFVRNTV 416
V + I +H +YN H+ + D+A++R R V
Sbjct: 267 THIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNN-DVALIRLAKPAIRTRY-V 324
Query: 417 QPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPI 596
QP +A + W GWG +G E L+ + ++ A C + S +
Sbjct: 325 QPVCLADGTVSFPPGTECWITGWGRLHSGGASPEILQQAKTKLLSYAECTKNGSYEAAAV 384
Query: 597 TANMLCS 617
++ MLC+
Sbjct: 385 SSTMLCA 391
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 54.4 bits (125), Expect = 9e-08
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 5/183 (2%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
SRI+GGT +P A L + + W CG ++++ V+TAAHC+
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKS-WNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYK 341
Query: 267 XXXXXXXXXXXXXH-EVNRHIIHPNYNHRTKDA---DIAIMRTVLRINFVRNTVQPARIA 434
+ IH + T + DIAIM+ + + +T+ PA +
Sbjct: 342 IKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMK-LANPAPIGHTISPACLP 400
Query: 435 GSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPI-TANML 611
G + + + GWG T G+ A L+ ++ ++ C ER + R + ML
Sbjct: 401 GLYDQVTSGTMCYVTGWGMTEYGNAGARLLQQARIPVVSSEEC-ERVNNKHRKVDKVTML 459
Query: 612 CSG 620
C+G
Sbjct: 460 CAG 462
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 51.2 bits (117), Expect = 8e-07
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 5/183 (2%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
SRIVGG+ +P +++S Q CG +++ V+TAAHC++
Sbjct: 629 SRIVGGSTAPPGAWPWQVMLIYNSGR----QFCGGTLVTPEWVITAAHCVVDKNPASIQV 684
Query: 267 XXXXXXXXXXXXXHEVNRHI----IHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQPARI 431
E+ I HP+Y + + DIA++R + R + + + A +
Sbjct: 685 RLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLR-LSRPTILTHRINLACM 743
Query: 432 AGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANML 611
+ + + + GWG+ +G E L V ++ C Y I+A+M+
Sbjct: 744 PNDTVHFPNGTMCYITGWGTLSSGGSQPEALNQAVVPLRTRSECERSY---PGKISADMI 800
Query: 612 CSG 620
C+G
Sbjct: 801 CAG 803
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 50.4 bits (115), Expect = 1e-06
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 7/186 (3%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQG---CGCSILNNRAVLTAAHCIIXXXXX 254
+SRIVGGT +P A M +++ G CG ++++ R V+TA+HC+
Sbjct: 246 NSRIVGGTTAQRGAWPWQA-------MLRYYNGNHFCGGTLVHPRWVVTASHCVHKLTTG 298
Query: 255 XXXXXXXXXXXXXXXXXHE---VNRHIIHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQP 422
+ + R +HPNY+ + A DIA++ R T
Sbjct: 299 DLYVRMGAHWKDGKTGSEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYT-NL 357
Query: 423 ARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITA 602
A +A + L D W +GWG +G L QV ++ C + Y
Sbjct: 358 ACLAPRSSPLPDGTRCWISGWGRLSSGGASPNVLMQAQVPLVSGQTCSQAYPGRTH---Y 414
Query: 603 NMLCSG 620
+MLC+G
Sbjct: 415 SMLCAG 420
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 48.8 bits (111), Expect = 4e-06
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 13/191 (6%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 269
RIVGG ++ +P A + CG S++N V+TAAHCI
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTIV---CGGSLINREWVVTAAHCIDRNNPSRTGCV 488
Query: 270 XXXXXXXXXXXXHEVNRH------------IIHPNYNHRTKDADIAIMRTVLRINFVRNT 413
+V +H IHP+Y+ D+A++R I
Sbjct: 489 VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKH 548
Query: 414 VQPARIAGS-NYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDR 590
V+P + S +LA G+G + QLRH + ++ + CR YS
Sbjct: 549 VRPVCLPTSATPDLAVGTNCTVTGYGRVGENEDLSTQLRHATIPVLSVSECRANYS--GH 606
Query: 591 PITANMLCSGW 623
I ++C+G+
Sbjct: 607 TINDKVICAGY 617
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Frame = +3
Query: 183 CGCSILNNRAVLTAAHCIIXXXXXXXXXXXXXXXXXXXXXX-HE------------VNRH 323
CG SI+N++ ++TAAHC+ H+ +
Sbjct: 1809 CGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEGI 1868
Query: 324 IIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTG 503
++HP+YN D DIA+++ I F +++ L + +GWG
Sbjct: 1869 VVHPSYNDL--DYDIALLKLRQPITF---NAYVSQVCLPQAALLAGTPCYVSGWGRIGES 1923
Query: 504 SGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
S + L+ + ++Q C E+Y + +PITA M C+G
Sbjct: 1924 SPGSNVLQEASIPLVDQRACEEQYRNL-KPITARMRCAG 1961
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 46.0 bits (104), Expect = 3e-05
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 18/195 (9%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 269
RIVGG T YP ++A CG S+++ + VLTAAHC+
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRKGGHVA-----CGGSLISEKWVLTAAHCVTHRNGNILPRS 161
Query: 270 XXXXXXXXXXXX---------HEVNRHIIHPNYNHRTKDADIAIMRT---VLRINFVRNT 413
++ HP ++H DAD+A+++ + +VR
Sbjct: 162 RFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPI 221
Query: 414 VQPARIAGSNYNLADNQVVWAAGWGST--RTGS----GFAEQLRHVQVWTINQAICRERY 575
P ++ ++ ++ A GWG T R G A+ L+ + +N +C + +
Sbjct: 222 CLPETDDQASL-ISPSKFGMAVGWGKTVGRQGDVSVKNLADALKETCMPIVNSHVCNQAF 280
Query: 576 SRIDRPITANMLCSG 620
+T NM C+G
Sbjct: 281 QDEGYSVTPNMFCAG 295
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 306 HEVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARI--AGSNY-NLADNQVVWA 476
++ + IHP+Y+ + D+DIA++R + F + V+P + A S+Y L N
Sbjct: 191 YDAEMYKIHPHYSPDSYDSDIALIRLAQPVTFT-DYVKPICLPSAASDYAQLQANVSGTI 249
Query: 477 AGWGSTRT-GSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
+GWG + A +L V ++ CR+ + D +TANM C+G+
Sbjct: 250 SGWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGF 297
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 42.3 bits (95), Expect = 4e-04
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 6/152 (3%)
Frame = +3
Query: 183 CGCSILNNRAVLTAAHCII----XXXXXXXXXXXXXXXXXXXXXXHEVNRHIIHPNYNHR 350
CG S+++ V+TAAHCI H+V R I HP YN
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSP 152
Query: 351 TKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRH 530
DIA++ P ++ + ++ + GWG R G L+
Sbjct: 153 QLSNDIALI----------ELSSPVPLSDRGHQVSVGSKCFITGWGKIRHPGGSHHILQQ 202
Query: 531 VQVWTINQAICRERYSR--IDRPITANMLCSG 620
+ ++Q C+++ + IT +M+C+G
Sbjct: 203 AMMPPLSQDACKKKVQQAGFGIQITDSMVCAG 234
Score = 34.7 bits (76), Expect = 0.076
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
S+RIVGGTA +P A +S + CG S+++ + VLTA HC+
Sbjct: 661 STRIVGGTAAKQGDWPWQAQLRSTSG----FPFCGGSLIHPQWVLTATHCV 707
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +3
Query: 312 VNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGS 491
V + I+HPNY +T D+D+A++R + + V + + A + + GWG
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLR-LSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGR 1463
Query: 492 TRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
T A L+ + ++Q C R +T+ M+C G+
Sbjct: 1464 TGYNRPGASVLQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGF 1506
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 41.9 bits (94), Expect = 5e-04
Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 7/184 (3%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 269
RI+GG +TI+++P M A + S Q CG S++ ++TAAHC
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSA-----QACGGSLVPEDWIVTAAHC-FDSNRLRWRVV 93
Query: 270 XXXXXXXXXXXXHEVNRHIIHPNYNHRTK-------DADIAIMRTVLRINFVRNTVQPAR 428
V+ HP Y D D+A+++ + TV P
Sbjct: 94 AGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTV-PIC 152
Query: 429 IAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANM 608
+ + + + AGWG G + LR VQV + + +C S I
Sbjct: 153 LVPRDTPRDLKRDCYVAGWGRRSFGGEQSLALREVQVHMVPRELCNSANS-YGGVIHERA 211
Query: 609 LCSG 620
LC+G
Sbjct: 212 LCAG 215
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 41.9 bits (94), Expect = 5e-04
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Frame = +3
Query: 72 IPDQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXX 251
+ +SRIVGG A +P A ++ CG S++++ VLTAAHCI
Sbjct: 384 VSSSTSRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGSLIHSNWVLTAAHCISSKRP 439
Query: 252 XXXXXXXXXXXXXXXXXXH----EVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQ 419
+V+ I H NYN RT DIA+++ L+ R T +
Sbjct: 440 AEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALLKLPLQ---HRQTGR 496
Query: 420 PARIAGSNYNLADNQV 467
R+ S ++ D QV
Sbjct: 497 -HRLIKSGHSRTDKQV 511
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 41.9 bits (94), Expect = 5e-04
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 14/198 (7%)
Frame = +3
Query: 72 IPDQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI--IXX 245
+P + R+VGG ++P A LF Q CG ++++ R V+T AHC
Sbjct: 22 VPRRFRRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHCFNPYTS 76
Query: 246 XXXXXXXXXXXXXXXXXXXXHEVNRHI----IHPNYNHRTKDA--------DIAIMRTVL 389
E R + +H +Y + DIA++
Sbjct: 77 EDPRDWNVTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDR 136
Query: 390 RINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRE 569
+ F VQP I N + N + +GWG TR L V V ++ A C +
Sbjct: 137 PVVF-NFHVQPICIMRPNISFKWNTACFISGWGHTRWNGSQPNVLNFVMVPLVSHATCNK 195
Query: 570 RYSRIDRPITANMLCSGW 623
S + I LC+G+
Sbjct: 196 PLS-YNGTIHETALCAGY 212
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 41.1 bits (92), Expect = 9e-04
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 4/171 (2%)
Frame = +3
Query: 120 DRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI----IXXXXXXXXXXXXXXXX 287
D +P A S N Q CG +++ VLTAAHC +
Sbjct: 1248 DSWPWQVALTLSGNPVQ---RCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRR 1304
Query: 288 XXXXXXHEVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQV 467
+ +HP YN + + D+A+++ F + V P I +N + +
Sbjct: 1305 DGKGQSLSIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF-NSRVSPICIV-ANEEVQAGRA 1362
Query: 468 VWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
AGWG + L ++ I + C SR +TA MLC+G
Sbjct: 1363 CAVAGWGQSYLPRITTIPLLTRRMRVIGRTDCAAAQSR----VTAQMLCAG 1409
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 41.1 bits (92), Expect = 9e-04
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
+RIVGGT +P A + SN Q CG ++++ + V+TAAHC+
Sbjct: 138 TRIVGGTKAPPGAWPWQA--MLRSNYGG--QFCGGTLVHPQWVITAAHCVYRRGPNDFKI 193
Query: 267 XXXXXXXXXXXXXHE---VNRHIIHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQPARIA 434
+ ++R I HP+Y+ T+ A DIA++ + + + V A +A
Sbjct: 194 RMGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIE-LAKPAVINKAVGLACLA 252
Query: 435 GSNYNLADNQVVWAAG 482
++ + D + W G
Sbjct: 253 DPSFPIDDGKKCWVTG 268
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 11/167 (6%)
Frame = +3
Query: 156 SNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXXXXXXXXXXXXXXHEVNRHII-- 329
+N W CG SI++ V+TA HC++ ++ I
Sbjct: 4 NNTGHW---CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPD 60
Query: 330 ----HPNYN----HRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGW 485
HP + DIA++ I F + +QP + + ++ + GW
Sbjct: 61 RIHLHPGFVIGGVSHPGYYDIALLHLAKPIQF-SDRIQPICLPQDDTEFPAGKMCYLTGW 119
Query: 486 GSTRTGSG-FAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
G T SG F+ L+ ++V +N+++C S I +C+G+
Sbjct: 120 GETVLDSGVFSPTLKQLKVPLVNKSVCNSNNS-YSGIIHEQFMCAGY 165
Score = 36.7 bits (81), Expect = 0.019
Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 10/173 (5%)
Frame = +3
Query: 75 PDQSSRIVGGTATTIDRYPTMAAALFSS-NMAQWWQGCGCSILNNRAVLTAAHCI----- 236
P SRIVGG + +P + + N+ + CG S+++ +LT++HC
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLTTHY--CGGSLIDPYWILTSSHCFWTYNN 297
Query: 237 IXXXXXXXXXXXXXXXXXXXXXXHEVNRHIIHPNYNH----RTKDADIAIMRTVLRINFV 404
I + ++ IHP D D+A+++ + R
Sbjct: 298 ISTQFEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIK-LKRPAVF 356
Query: 405 RNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAIC 563
V + NL + GWG T GS ++ L V+V +++ +C
Sbjct: 357 HKCVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSPYSLVLNEVEVDIVSKEVC 409
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +3
Query: 357 DADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQ 536
D D+A+++ + R V + NL + GWG T GS ++ L ++
Sbjct: 459 DYDVALIK-LKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSPYSPVLNELE 517
Query: 537 VWTINQAIC 563
V +++ +C
Sbjct: 518 VDIVSKEVC 526
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 39.1 bits (87), Expect = 0.004
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Frame = +3
Query: 78 DQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHC------II 239
D+ RIVGG +P +AA + CG +++ V+TAAHC I+
Sbjct: 719 DKRFRIVGGREAKAGAWPWLAAIYVKGSFR-----CGGALIARDWVVTAAHCFYYDGKIV 773
Query: 240 XXXXXXXXXXXXXXXXXXXXXXHEVNRHIIHPNYNHRTKDADIAIMRT---VLRINFVRN 410
+ ++HP N D D+A+++ V +VR
Sbjct: 774 PSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRT 833
Query: 411 TVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQ------LRHVQVWTINQAICRER 572
P +V AGWGST+ G L+ VQ+ ++ +C+
Sbjct: 834 VCLPQPTDAILVRPGSVGIV--AGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVN 891
Query: 573 YSRIDRPITANMLCSG 620
++ IT M C+G
Sbjct: 892 HT---NAITKRMRCAG 904
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 38.7 bits (86), Expect = 0.005
Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 8/186 (4%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 269
R+V G+ +P L S + CG ++++ V+TAAHC+
Sbjct: 43 RVVSGSEVEPQSWPWQVH-LLQSRDGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYKV 101
Query: 270 XXXXXXXXXXXXHE----VNRHIIHPNY-NHRTKDADIAIM---RTVLRINFVRNTVQPA 425
E V+ +H + + DIA++ R + FVR PA
Sbjct: 102 ILGDFNRDIKEPTEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCLPA 161
Query: 426 RIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITAN 605
+ GS + + + GWG T + LR Q+ + Q C S +
Sbjct: 162 Q--GS--RALEGTMCFITGWGKTNITEDKSVTLREAQLPIVGQKECNNSNSWFHIVDETS 217
Query: 606 MLCSGW 623
MLC+G+
Sbjct: 218 MLCAGY 223
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.9 bits (84), Expect = 0.008
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Frame = +3
Query: 183 CGCSILNNRAVLTAAHCII-XXXXXXXXXXXXXXXXXXXXXXHEVNRHIIHPNY-NHRTK 356
CG S+L++ VLTAAHC+I H+++ H Y + K
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDK 399
Query: 357 DADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGF--AEQLRH 530
D+A++R F V P + L + + + GWG F A +L+
Sbjct: 400 KHDLALIRLAKPAAFSAK-VSPVCLPKQGDLLGNEKNCYTTGWGRVSGSMMFFMATKLQQ 458
Query: 531 VQVWTINQAICRERYSRIDRPITANMLCSG 620
+ ++ C + + T M+C+G
Sbjct: 459 ARTPVVDHETCAIKLDKFAADKT-TMICAG 487
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 75 PDQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
P QS R++ G T +P + S + CG S++++ VLTAAHC+
Sbjct: 33 PSQS-RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCV 85
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
+RIVGGT ++ +P A L S+ +Q+ CG S+++ VLTAAHC+
Sbjct: 258 TRIVGGTEAPVNGWPWQAM-LRSAGGSQF---CGGSLIHPEWVLTAAHCL 303
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 36.7 bits (81), Expect = 0.019
Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 1/180 (0%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
+RIV G +P +A+ + + CG +++ +TAAHC++
Sbjct: 324 ARIVNGQEAVSHSWPWIASLRKGRSN---YHTCGATLIRPGWAITAAHCVMRPDKYTVIV 380
Query: 267 XXXXXXXXXXXXXH-EVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSN 443
+ +V R H ++ DIA++ + R + + V A +
Sbjct: 381 GSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLE-LERSAVINDKVSTACLPSGE 439
Query: 444 YNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
+ + + AGWG ++ A L+ +V +++ C+ Y I RP + +C G+
Sbjct: 440 PKV--GAICYIAGWGRLQSLGDVALTLQQAKVPIVSKEDCKRAYGAIIRPY--SHICVGF 495
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 321 HII-HPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTR 497
H+I HP Y+ R DIA++ + F R + +N + + GWGST
Sbjct: 156 HVIEHPEYDDRKIKNDIALLELSRPVKFDREG-KVGTACLTNQQPTPGKRCYITGWGST- 213
Query: 498 TGSGFAEQ-LRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
G+G + + L+ + + C+ +Y + TA+ LC+G
Sbjct: 214 IGTGNSPRILQQAMLPIASHNDCKNKYYGVSS--TAH-LCAG 252
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
+RIVGGT ++ +P A L S+ +Q+ CG S+++ VLTAAHC+
Sbjct: 218 TRIVGGTEAPVNGWPWQAM-LRSAGGSQF---CGGSLIHPEWVLTAAHCL 263
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
S+RIVGGTA + +P A +S + CG ++++ R V+TA+HCI
Sbjct: 21 STRIVGGTAAPKNAWPWQAQLRSASG----FPFCGGTLVHPRFVVTASHCI 67
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCI 236
+RIVGGTA + +P A +S CG S+++ + +LTA HC+
Sbjct: 52 TRIVGGTAAKQNSWPWQAQLRTTSGFPY----CGGSLIHPQWILTATHCV 97
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHC 233
+RIVGG +P + Q CG +++N VLTAAHC
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +3
Query: 312 VNRHIIHPNYNHRTKDADIAIMR---TVLRINFVRNTVQPARIAGSNYNLADNQVVWAAG 482
+++ HP ++ T D DIAI+R VL + V P++ G+ +L N + +G
Sbjct: 34 ISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQ--GARASLGGN--CFISG 89
Query: 483 WGSTRTGSG--FAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
WG + A +L+ +V I C+ + + + +M+C+G
Sbjct: 90 WGRINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAG 137
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Frame = +3
Query: 75 PDQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXX 254
P SR++GG +P A N CG S++++ V+TAAHC+
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIALKSRGNFI-----CGGSLVSSTWVVTAAHCVARSSNP 525
Query: 255 XXXXXXXXXXXXXXXXXHE----VNRHIIHPNYNHRTKDADIAIM 377
E V + I HP YN+ DIA++
Sbjct: 526 AQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALI 570
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 33.1 bits (72), Expect = 0.23
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXX 263
SSR+V G T+ +P A ++ CG S++ + VLTA HCI+
Sbjct: 59 SSRVVSGDDATLGEWPWQAWL----HVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYR 114
Query: 264 XXXXXXXXXXXXXXHE---VNRHIIHPNYNHRTK-DADIAIM---RTVLRINFVRNTVQP 422
+ V R I HP+Y+ D D+A++ R +FV P
Sbjct: 115 VVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVNTVCLP 174
Query: 423 AR 428
A+
Sbjct: 175 AQ 176
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXX 263
++RIVGGTA +P A +S CG S++ + +LTA HC+
Sbjct: 8 NTRIVGGTAAKHGDWPWQAQLRTTSGFPY----CGGSLIAPQWILTATHCVERKQASSIV 63
Query: 264 XXXXXXXXXXXXXXHE---VNRHIIHPNYNH-RTKDADIAIMR 380
+ V + I HP+Y+ +T DIA+++
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALLK 106
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 357 DADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQ 536
D D+A+++ + R V + NL + GWG T GS ++ L ++
Sbjct: 82 DYDVALIK-LKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSPYSPVLNELE 140
Query: 537 VWTINQAICRERYSRIDRPITANMLCSGW 623
V +++ +C S + I C+G+
Sbjct: 141 VDIVSKEVCNANDS-YNGTINDRYFCAGF 168
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCII 239
SR++GG A +P S +M + CG ++++++ V+TAAHC+I
Sbjct: 475 SRVIGGEAARPYSWPWQV----SVSMGKL-HSCGGALISSKWVITAAHCVI 520
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHC 233
RIVGG +P A L + Q CG S++N V+TA HC
Sbjct: 53 RIVGGVEAAPGAWPWQVALLMNGT-----QFCGGSLVNENWVVTARHC 95
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHC 233
RIVGG + +P AA + + CG S++ ++ V+TAAHC
Sbjct: 26 RIVGGIESANGAWPWQAALFLNGTHHR----CGGSVIKSQWVVTAAHC 69
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 183 CGCSILNNRAVLTAAHCIIXXXXXXXXXXXXXXXXXXXXXXHE----VNRHIIHPNYNHR 350
CG S++++R V+TAAHCI + +++ I HP YN R
Sbjct: 132 CGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDR 191
Query: 351 TKDADIAIMRTVLRINF 401
DIA++ + F
Sbjct: 192 RIVNDIALLELATPVQF 208
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 324 IIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGWGSTRTG 503
I HP YN R DIA++ + F + + + ++ A + + GWG+
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQF-DSAGKVGTVCLTDQRPAPGKRCYITGWGAINGD 570
Query: 504 SGFA-EQLRHVQVWTINQAICRERYSRIDRPITANMLCSG 620
+ + + L+ + + CR +Y D TA+ LC+G
Sbjct: 571 TQQSPDILQQAMLPIASHENCRRKYG--DVSSTAH-LCAG 607
>SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3)
Length = 483
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 126 YPTMAAALFSSNMAQWWQGCGC 191
YP AAL SN+++WWQ C
Sbjct: 85 YPNKVAALKESNISRWWQEVKC 106
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 306 HEVNRHIIHPNYNHRTKDADIAIMRTVLRINFVRNTVQPARIAGSNYNLADNQVVWAAGW 485
HE + + D DIA++R F N V P + + L + GW
Sbjct: 30 HEAYKSMFLEGIKDTPPDFDIALVRLSEPAIFDEN-VSPICLLPPEHKLPWGKTCIITGW 88
Query: 486 GSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
G R E LR +V + +C + + I + LC+G+
Sbjct: 89 GHIRWNGTQPEALREAKVRLVPTWVC-NLVNSYNGTIHSRALCAGF 133
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 84 SSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHC 233
+S I+GGT + +P S + + CG ++L + VLTAA C
Sbjct: 255 TSNIIGGTDAAVGEWPWQV----SLYLTHYGPVCGGTLLTSEWVLTAARC 300
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 483 WGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGWLD 629
WG T G L V+V ++ + C YSR+ + SG +D
Sbjct: 2 WGRTAEGGSSPTVLMQVEVPIVSASTCSRAYSRLHESMVCAGRASGGID 50
>SB_37508| Best HMM Match : S-antigen (HMM E-Value=4.3)
Length = 1347
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -1
Query: 431 NTSWLHGITYEVYP*NCTHDCNISVLCTMIVIRVDDVPVDLMDNTST-ISKRRSYANSPN 255
NT+W + +P NC ++ T VI D P++ T T IS S+ + +
Sbjct: 231 NTNWPKTLAKNAFPGNCRSRYDVQGSSTTTVI---DCPIERTSKTDTNISTSSSFTSCGS 287
Query: 254 TDTISYNTMCGCKD-GSVIENGT 189
IS ++ G D IEN T
Sbjct: 288 GQDISLVSLKGISDLCERIENET 310
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCII 239
RIVGG +P + + CG S+L+ +LTAAHC+I
Sbjct: 30 RIVGGDEAVPHSWPWQVSIRLKGSHI-----CGGSLLSPLWLLTAAHCVI 74
>SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84)
Length = 1737
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 598 LPICCAPAGLTSAAAISVEVIPVVLYTTTVSSS 696
+P C AP GL + + +++V P L T+ VSS+
Sbjct: 531 IPSCIAPIGLPAVTSSTMKVEPPQLSTSHVSST 563
>SB_39886| Best HMM Match : PH (HMM E-Value=0.0007)
Length = 597
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -1
Query: 644 IAAADVK-PAG-AQHIGSDRSIYSRVSLSTN 558
IA A VK P G A+ GSD +IY R+S+S++
Sbjct: 133 IAGASVKKPKGSARSSGSDETIYERLSISSD 163
>SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 305 DNTSTISKRRSYANSPN-TDTISYNTMCGCKDGSVIENGTA 186
+N ++ + SY N+ + D SYN C D ++ N T+
Sbjct: 457 NNATSCNDATSYNNATSCNDATSYNNATSCNDATLYNNATS 497
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 305 DNTSTISKRRSYANSPN-TDTISYNTMCGCKDGSVIENGTA 186
+N ++ + SY N+ + D SYN C D ++ N T+
Sbjct: 601 NNATSCNDATSYNNATSCNDATSYNNATSCNDATLYNNATS 641
>SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14)
Length = 1030
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 363 DIAIMRTVLR----INFVRNTVQPARIAGSNYNLADNQV 467
DI I + VL +N N+ QP +A S+Y+ AD+Q+
Sbjct: 236 DITIKKGVLPSEVVVNVTLNSSQPVSLASSSYSTADSQL 274
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -2
Query: 124 RSIVVAVPPTILEDWSGMAATAPTKSSKTSV 32
R+ + +PPT+ + G+A T PT +++++
Sbjct: 453 RNAHIVMPPTLADGHIGLAVTTPTAQTRSAI 483
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,648,086
Number of Sequences: 59808
Number of extensions: 506500
Number of successful extensions: 1658
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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