Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k07
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 60 2e-09
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 45 6e-05
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 37 0.017
M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein. 29 3.3
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.3
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dau... 29 3.3
AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal daue... 29 3.3
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 29 4.4
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 7.7
U29377-9|AAA68718.3| 405|Caenorhabditis elegans Hypothetical pr... 28 7.7
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 7.7
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 7.7
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 59.7 bits (138), Expect = 2e-09
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +3
Query: 90 RIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXXX 269
R++GG+ ++ +P L S + CG S+++ VLTAAHC
Sbjct: 57 RLIGGSESSPHSWPWTVQLL--SRLGH--HRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 270 XXXXXXXXXXXXHEVNRHIIHPNYNHRTKDA-DIAIMRTVLRINFVRNTVQPARIAGSNY 446
H V IHP YN + D AIMR +N T +P I +
Sbjct: 113 RVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARP--ICLPSL 169
Query: 447 NLADNQVVWAAGWGSTRTGSGF-AEQLRHVQVWTINQAICRERYSRIDRPITANMLCSGW 623
+N++ GWGST GS A LR + V ++ C + I R +MLC+G+
Sbjct: 170 PAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY 229
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 44.8 bits (101), Expect = 6e-05
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 3/184 (1%)
Frame = +3
Query: 87 SRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXXXXXX 266
+R+VGG T +P AA N A CG SIL+ ++TAAHC
Sbjct: 25 ARVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYE 81
Query: 267 XXXXXXXXXXXXXHEVNRHIIHPNYNHRTKDA---DIAIMRTVLRINFVRNTVQPARIAG 437
+E ++ ++ KD DIAI+ QP +
Sbjct: 82 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 438 SNYNLADNQVVWAAGWGSTRTGSGFAEQLRHVQVWTINQAICRERYSRIDRPITANMLCS 617
++ + +GWGS G +AE+L+ + IN+ C S+I ++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWGS--MGLRYAERLQAALIPIINRFDC-VNSSQIYSSMSRSAFCA 198
Query: 618 GWLD 629
G+L+
Sbjct: 199 GYLE 202
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/102 (28%), Positives = 43/102 (42%)
Frame = +3
Query: 75 PDQSSRIVGGTATTIDRYPTMAAALFSSNMAQWWQGCGCSILNNRAVLTAAHCIIXXXXX 254
P S RI+GG + ID A L S CG +++++ ++TAAHC +
Sbjct: 32 PIFSFRIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTR 89
Query: 255 XXXXXXXXXXXXXXXXXHEVNRHIIHPNYNHRTKDADIAIMR 380
V IH YN++T D DIA++R
Sbjct: 90 SFVYVREPKNNRERSF--SVKEAYIHSGYNNQTADNDIALLR 129
>M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 314 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 174
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 473 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 521
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 236 NTMCGCKDGSVIENGTATSLPPLGHIARK 150
N +C C++G V ++ T + + P G+I K
Sbjct: 1340 NQLCSCENGGVCDSSTGSCVCPPGYIGTK 1368
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 236 NTMCGCKDGSVIENGTATSLPPLGHIARK 150
N +C C++G V ++ T + + P G+I K
Sbjct: 1340 NQLCSCENGGVCDSSTGSCVCPPGYIGTK 1368
>AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform b protein.
Length = 668
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 314 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 174
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 472 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 520
>AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform a protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 314 DLMDNTSTISKRRSY--ANSPNTDTISYNTMCGCKDGSVIENGTATSLP 174
+++++T + SY A+ + + + T+C C+DG V+ AT +P
Sbjct: 473 EILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIP 521
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 312 PHGQHLHYFQKKIL 271
PHG+HL+YFQK L
Sbjct: 483 PHGRHLNYFQKTFL 496
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -1
Query: 305 DNTSTISKRRSYANSPNTDTISYN--TMCG 222
+N+ T SK +YA +TDT++ N T+CG
Sbjct: 231 ENSLTSSKCNNYALEQSTDTVTMNYLTLCG 260
>U29377-9|AAA68718.3| 405|Caenorhabditis elegans Hypothetical
protein K05F1.1 protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 203 IENGTATSLPPLGHIARKKCCCHCGVPVDSCRCPTDNP*G-LVWYGS 66
+ N TA SLP +I R +C C +P++ D+ G +V+ G+
Sbjct: 257 VVNVTAHSLPKKPYITRVQCDAKCKIPINWAHAFCDSKLGKIVFIGT 303
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 711 PTSTPXRRHRCGIEDHRNHLHTDRGRRRQASRS 613
P P RRH CG D DR R R SRS
Sbjct: 38 PEVAPHRRH-CGRRDRSRSRGFDRSRSRSRSRS 69
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 711 PTSTPXRRHRCGIEDHRNHLHTDRGRRRQASRS 613
P P RRH CG D DR R R SRS
Sbjct: 112 PEVAPHRRH-CGRRDRSRSRGFDRSRSRSRSRS 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,114,976
Number of Sequences: 27780
Number of extensions: 363795
Number of successful extensions: 1059
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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