Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k06
(744 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 375 e-103
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 347 2e-94
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 271 1e-71
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 262 5e-69
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 243 3e-63
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 202 7e-51
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 200 4e-50
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 196 5e-49
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 192 6e-48
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 192 1e-47
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 192 1e-47
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 186 4e-46
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 185 9e-46
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 182 6e-45
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 173 3e-42
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 170 3e-41
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 160 3e-38
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 155 1e-36
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 145 1e-33
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 141 1e-32
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 138 2e-31
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 126 8e-28
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 123 5e-27
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 110 4e-23
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 109 5e-23
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 105 9e-22
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 105 9e-22
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 99 1e-19
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 98 2e-19
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 89 1e-16
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 87 6e-16
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 85 1e-15
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 85 2e-15
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 84 4e-15
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 81 4e-14
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 80 7e-14
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 79 1e-13
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 77 6e-13
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 77 6e-13
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 76 8e-13
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 75 1e-12
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 74 3e-12
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 73 1e-11
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 73 1e-11
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 73 1e-11
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 72 1e-11
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 72 2e-11
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 71 3e-11
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 71 3e-11
UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5; ... 71 3e-11
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 71 4e-11
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 70 5e-11
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 70 7e-11
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 68 3e-10
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 68 3e-10
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 67 4e-10
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 66 6e-10
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 66 9e-10
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 66 9e-10
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 64 3e-09
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 63 8e-09
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 63 8e-09
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 62 1e-08
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 62 1e-08
UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 62 1e-08
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 61 2e-08
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 61 2e-08
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 61 2e-08
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 61 3e-08
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 61 3e-08
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 60 4e-08
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 60 4e-08
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 60 4e-08
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 60 4e-08
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 60 6e-08
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 59 1e-07
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 59 1e-07
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 59 1e-07
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 58 3e-07
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 57 4e-07
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 57 5e-07
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 56 7e-07
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 56 9e-07
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 56 1e-06
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 56 1e-06
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 56 1e-06
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 56 1e-06
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 55 2e-06
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 54 3e-06
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 54 4e-06
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 53 9e-06
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 53 9e-06
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 53 9e-06
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 52 1e-05
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 52 2e-05
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 51 3e-05
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 51 3e-05
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 51 3e-05
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 51 3e-05
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 50 5e-05
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 50 5e-05
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 50 5e-05
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 50 5e-05
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 50 6e-05
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 50 8e-05
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 49 1e-04
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 49 1e-04
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 49 1e-04
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 48 2e-04
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 48 2e-04
UniRef50_Q8VNS1 Cluster: EscN protein; n=11; Enterobacteriaceae|... 48 2e-04
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 48 2e-04
UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio... 48 2e-04
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 48 2e-04
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 48 2e-04
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 47 4e-04
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 47 6e-04
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 47 6e-04
UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s... 47 6e-04
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 46 0.001
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 46 0.001
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 46 0.001
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 46 0.001
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 44 0.003
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 44 0.004
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 41 0.037
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 40 0.049
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.11
UniRef50_A1U7T6 Cluster: Putative uncharacterized protein precur... 38 0.20
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 38 0.20
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 38 0.20
UniRef50_A0GA71 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 38 0.26
UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p... 38 0.34
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 37 0.46
UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.46
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.46
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 37 0.46
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 37 0.60
UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n... 37 0.60
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 37 0.60
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 37 0.60
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 37 0.60
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 36 0.80
UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa... 36 0.80
UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:... 36 0.80
UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'regio... 36 0.80
UniRef50_UPI00015B626E Cluster: PREDICTED: similar to ENSANGP000... 36 1.1
UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;... 36 1.1
UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole... 36 1.1
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 36 1.1
UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis glycosy... 36 1.4
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 35 1.8
UniRef50_Q8XIB4 Cluster: Transcription terminator Rho factor; n=... 35 1.8
UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4.... 35 1.8
UniRef50_Q2Y0E8 Cluster: VP3; n=1; Aedes pseudoscutellaris reovi... 35 2.4
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 35 2.4
UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ... 35 2.4
UniRef50_Q1YH29 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_A5FDH8 Cluster: YD repeat-containing protein precursor;... 34 3.2
UniRef50_UPI0001561691 Cluster: PREDICTED: similar to family wit... 34 4.2
UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B ... 34 4.2
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71, wh... 34 4.2
UniRef50_Q571W8 Cluster: Variant surface glycoprotein Bug 2; n=2... 34 4.2
UniRef50_UPI00015605F2 Cluster: PREDICTED: similar to family wit... 33 5.6
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 33 5.6
UniRef50_Q2IXZ1 Cluster: Filamentous haemagglutinin-like protein... 33 5.6
UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF5... 33 5.6
UniRef50_Q19YC3 Cluster: Gp26; n=2; unclassified Siphoviridae|Re... 33 5.6
UniRef50_Q22MH0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5; Anaplasmatac... 33 5.6
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 33 7.4
UniRef50_UPI0000DB768A Cluster: PREDICTED: similar to CG3328-PA;... 33 7.4
UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18; Alphaproteobacte... 33 7.4
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 33 7.4
UniRef50_A6G840 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A3UAG1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole gen... 33 7.4
UniRef50_Q0CZ31 Cluster: Predicted protein; n=1; Aspergillus ter... 33 7.4
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 7.4
UniRef50_UPI0000D99778 Cluster: PREDICTED: hypothetical protein;... 33 9.8
UniRef50_Q1J361 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_A5UZM9 Cluster: Peptidase C60, sortase A and B precurso... 33 9.8
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 33 9.8
UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;... 33 9.8
UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 33 9.8
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 375 bits (923), Expect = e-103
Identities = 189/227 (83%), Positives = 203/227 (89%), Gaps = 1/227 (0%)
Frame = +3
Query: 66 MSLISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILG 242
MS+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 243 AAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGN 422
APKADLEETGRVLSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGN
Sbjct: 61 VAPKADLEETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGN 120
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
DKLIK+GDIVKRTGAIVDVPVG+++LGRVVDALGN IDGKG I+TK R RVGIKAPGIIP
Sbjct: 121 DKLIKQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIP 180
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG TALAIDTIIN
Sbjct: 181 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 227
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 347 bits (852), Expect = 2e-94
Identities = 173/228 (75%), Positives = 193/228 (84%), Gaps = 4/228 (1%)
Frame = +3
Query: 72 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 239
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 240 GAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFG 419
GA DLEETGRVLSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFG
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
Query: 420 NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGII 599
NDKLIKEGDIVKRTGAIVDVPVGE++LGRVVDALGN IDGKGPI +K+R RVG+KAPGII
Sbjct: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
Query: 600 PRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
PR+SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG T++AIDTIIN
Sbjct: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIIN 228
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 271 bits (665), Expect = 1e-71
Identities = 132/180 (73%), Positives = 153/180 (85%)
Frame = +3
Query: 204 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 383
AE+ST+LE+RI K ++E GRV+S+GDGIARVYGL IQA EMVEF+SG+KGMALN
Sbjct: 7 AELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALN 66
Query: 384 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 563
LE +NVG+V+FG+D IKEGDIVKRTG+IVDVPVG+ +LGRVVDALG PIDGKG +
Sbjct: 67 LENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSAVE 126
Query: 564 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
R RV +KAPGII R SV EPMQTG+KAVDSLVPIGRGQRELIIGDRQTG TA+AIDTI+N
Sbjct: 127 RRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 186
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 262 bits (643), Expect = 5e-69
Identities = 125/162 (77%), Positives = 143/162 (88%)
Frame = +3
Query: 258 DLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK 437
D++E G V+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+
Sbjct: 47 DIKEYGTVISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQ 106
Query: 438 EGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 617
EGDIVKRTGAIVDVP+G ++LGRV DALGNPIDG GP+ T +R RV +KAPGIIPR SV
Sbjct: 107 EGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPVKTNTRRRVELKAPGIIPRKSVH 166
Query: 618 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
EPMQTG+KAVD LVPIGRGQRELIIGDRQTG TA+AIDTIIN
Sbjct: 167 EPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 208
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 243 bits (595), Expect = 3e-63
Identities = 121/182 (66%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
Frame = +3
Query: 198 KAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGM 374
+ AEIS IL+++I + ETG VLSIGDGIARVYGL N+ A EMVEF +GLKGM
Sbjct: 4 RPAEISDILKQQIASFDQVETVSETGTVLSIGDGIARVYGLTNVMAGEMVEFEGTGLKGM 63
Query: 375 ALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 554
ALNLE DNVGVV+FG+ I+EGD V RT ++V+VPVG+ +LGRVVD LGNPIDG+GP+
Sbjct: 64 ALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLT 123
Query: 555 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDT 734
R +KAPGI+PR SV EPMQTGIKA+D+LVPIGRGQRELIIGDRQTG TA+ IDT
Sbjct: 124 DVEYRRAEVKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDT 183
Query: 735 II 740
I+
Sbjct: 184 IV 185
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 202 bits (493), Expect = 7e-51
Identities = 101/179 (56%), Positives = 130/179 (72%)
Frame = +3
Query: 207 EISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNL 386
EI+ +++ +I K L++ G V ++GDGI+RV GL+ + E++EF +G GMA+NL
Sbjct: 7 EITGLIKSQIKNYRTKLVLDDVGTVCTVGDGISRVNGLEKCMSGELLEFENGTYGMAMNL 66
Query: 387 EPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 566
E D VG V+ G ++ I+EG VKRTG IV VPVGE +LGRVV+ALG PIDGKG I T
Sbjct: 67 EQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNALGAPIDGKGAILTNET 126
Query: 567 MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
V A GII R SV P+QTGIKA+DS++P+GRGQRELIIGDRQTG T +A+DTIIN
Sbjct: 127 RPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIIN 185
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 200 bits (487), Expect = 4e-50
Identities = 91/184 (49%), Positives = 131/184 (71%)
Frame = +3
Query: 192 THKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKG 371
T A +I +EE + EE G V+ +GD IA V GL ++ +E++EF G+ G
Sbjct: 5 TISADDIQNAIEEYVSSFTADTFREEVGTVVDVGDSIAHVEGLPSVMTQELLEFPGGILG 64
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
+ALNL+ NVG V+ G+ + IKEG VKRTG ++ VPVGE +GRVV+ LG PIDG+G I
Sbjct: 65 VALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAFMGRVVNPLGQPIDGRGDI 124
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
+ ++R + ++AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IGDR+TG TA+ +D
Sbjct: 125 EAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVD 184
Query: 732 TIIN 743
TI+N
Sbjct: 185 TILN 188
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 196 bits (478), Expect = 5e-49
Identities = 95/124 (76%), Positives = 107/124 (86%)
Frame = +3
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN DGKGPI
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
+K+ RVG+K PGIIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTG T++AID
Sbjct: 61 GSKTHRRVGLKGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAID 120
Query: 732 TIIN 743
TIIN
Sbjct: 121 TIIN 124
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 192 bits (469), Expect = 6e-48
Identities = 100/148 (67%), Positives = 112/148 (75%), Gaps = 4/148 (2%)
Frame = +3
Query: 72 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 239
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 240 GAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFG 419
GA DLEETGRVLSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFG
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
Query: 420 NDKLIKEGDIVKRTGAIVDVPVGEQILG 503
NDKLIKEGDIVKRTG IVDVPVG+ +LG
Sbjct: 121 NDKLIKEGDIVKRTGXIVDVPVGKDLLG 148
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 192 bits (467), Expect = 1e-47
Identities = 89/157 (56%), Positives = 122/157 (77%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 452
G+V+S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V
Sbjct: 151 GQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQV 210
Query: 453 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 632
T IV+ PVG+++LGRVVDALGNPIDGK I + + + +KAPGI+ R + E + T
Sbjct: 211 ISTNTIVNCPVGKELLGRVVDALGNPIDGKPSIISLEKREIDVKAPGIMDRKPINEQLIT 270
Query: 633 GIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
GIK +DSL+PIG GQRE I+GDRQTG T+L +D I+N
Sbjct: 271 GIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILN 307
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 192 bits (467), Expect = 1e-47
Identities = 97/186 (52%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
Frame = +3
Query: 192 THKAAEISTILEERILGAAPKADL-EETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLK 368
T + EI L+ + P+ + EE G V++ GDGIA V GL + A E++ F +G
Sbjct: 5 TIRPEEIRDALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGLPSAMANELLRFENGTM 64
Query: 369 GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 548
G+ALNLE +GVVV G+ I EG V+ TG ++ VPVGE LGRVVDA+GNP+DG G
Sbjct: 65 GIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGE 124
Query: 549 I-DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALA 725
I + R + I+A G++ R VREP+QTG+KA+DS++PIGRGQR+LIIGDR+TG TA+A
Sbjct: 125 IKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIA 184
Query: 726 IDTIIN 743
IDTIIN
Sbjct: 185 IDTIIN 190
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 186 bits (454), Expect = 4e-46
Identities = 87/148 (58%), Positives = 115/148 (77%)
Frame = +3
Query: 300 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 479
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 480 PVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 659
PVGE+++GRVV+ALG PIDG G ++T V KAPG++ R SV EP+QTGIKA+D+LV
Sbjct: 61 PVGEELIGRVVNALGQPIDGLGDLNTTKTRPVEAKAPGVMARKSVSEPLQTGIKAIDALV 120
Query: 660 PIGRGQRELIIGDRQTGXTALAIDTIIN 743
PIGRGQRELIIGDR+TG T++A+DTI+N
Sbjct: 121 PIGRGQRELIIGDRKTGKTSIAVDTILN 148
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 185 bits (451), Expect = 9e-46
Identities = 95/185 (51%), Positives = 127/185 (68%)
Frame = +3
Query: 189 TTHKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLK 368
T +K + + ++ +I + KA E G V+S+GDGI V GL N+ E+V F +G++
Sbjct: 2 TDNKNHSLISDIKSQIKKFSEKALTLEVGNVISLGDGIVLVDGLDNVMLNEIVRFENGVE 61
Query: 369 GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 548
GMALNLE D VGVV+ G+ IKEGD V RT IV+VPVG+ +LGRVVDALG +D KG
Sbjct: 62 GMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGN 121
Query: 549 IDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAI 728
I + APG++ R SV +P++TGI ++D++ PIG+GQRELIIGDRQTG T +AI
Sbjct: 122 IVANKFSVIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAI 181
Query: 729 DTIIN 743
D IIN
Sbjct: 182 DAIIN 186
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 182 bits (444), Expect = 6e-45
Identities = 86/184 (46%), Positives = 123/184 (66%)
Frame = +3
Query: 192 THKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKG 371
T + EI + +E +P+A EE G V DGIA V GL + A E++EF G+ G
Sbjct: 5 TISSDEIRSAIENYTASYSPEASREEVGLVTDTSDGIAHVSGLPSAMANELLEFPGGILG 64
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
+ALNL+ +G V+ G+ + I+EG VKRTG ++ VPVG+ LGRV++ LG PIDG G I
Sbjct: 65 VALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVINPLGQPIDGLGEI 124
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
++ + ++A ++ R V EP+QTGIKA+D++ PIGRGQR+L+IGDR+TG TA+ ID
Sbjct: 125 ESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCID 184
Query: 732 TIIN 743
I+N
Sbjct: 185 AILN 188
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 173 bits (422), Expect = 3e-42
Identities = 81/165 (49%), Positives = 119/165 (72%)
Frame = +3
Query: 249 PKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK 428
P L E GRV+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G +
Sbjct: 57 PAPVLTEVGRVIEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSE 116
Query: 429 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 608
I+ G+ V+RT ++ VPVG +LGRVVDA+G P DG G I + V +APG++ R
Sbjct: 117 HIRLGEDVRRTRKVISVPVGPALLGRVVDAVGLPRDGLGVIAAVAEHPVEAEAPGVLSRS 176
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
++ +P+ TGIKA+D+ VP+G GQRELIIGDRQTG T++A+DT++N
Sbjct: 177 AIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLN 221
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 170 bits (414), Expect = 3e-41
Identities = 80/166 (48%), Positives = 113/166 (68%)
Frame = +3
Query: 246 APKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND 425
AP E G + SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G
Sbjct: 26 APSLAPREVGTITSIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEY 85
Query: 426 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPR 605
+ GD V RTG ++DV VG+ +LGRV+D LG P+DG+GP+ + R+ + A I+ R
Sbjct: 86 WHLHAGDEVDRTGRVMDVAVGDGLLGRVIDPLGRPLDGRGPVASSHRLPIERPASPIMDR 145
Query: 606 VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
V P+QTG+K +D+L+P+GRGQRELI+GDRQTG TA+AIDTI+N
Sbjct: 146 APVTVPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAIDTILN 191
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 160 bits (389), Expect = 3e-38
Identities = 94/165 (56%), Positives = 114/165 (69%)
Frame = +3
Query: 204 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 383
A +S++ EE ILGA ADLE+TG VLS GDGI R+ GL+N QAEEMV FSS LK M LN
Sbjct: 49 AGVSSVSEECILGANTSADLEDTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLN 107
Query: 384 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 563
LE D +VV + KEGD VKRTGAI+DV VG+++LGRVV A+G D+K
Sbjct: 108 LEADM--LVVLHLEMNTKEGDTVKRTGAIMDVLVGKKLLGRVVGAIG---------DSKD 156
Query: 564 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 698
+VG+K I +SV+EPM+TGIKAVDSLVPIG GQ E+ D
Sbjct: 157 HRQVGLKVLRITLPISVQEPMETGIKAVDSLVPIGPGQHEICFSD 201
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 155 bits (375), Expect = 1e-36
Identities = 77/157 (49%), Positives = 101/157 (64%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 452
GRV + DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V
Sbjct: 40 GRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAV 99
Query: 453 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 632
RTGA+++VP G Q+LGRVVD LG P+DG P+D + + AP II R V EP+ T
Sbjct: 100 ARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDT 159
Query: 633 GIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
G+ VD+L IGRGQRELIIGDR TG T+LAID I+N
Sbjct: 160 GVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVN 196
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 145 bits (351), Expect = 1e-33
Identities = 69/165 (41%), Positives = 105/165 (63%)
Frame = +3
Query: 249 PKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK 428
P+ + E G V S+GDGIA V GL + ++++ F G + L +G V+ +
Sbjct: 30 PRLRIGEYGTVASVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSE 89
Query: 429 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 608
+ G + G +DVPVGE +LGRV+D +GNP+DG P++T++R + +P II R
Sbjct: 90 NLTAGTPARLAGRTLDVPVGETLLGRVIDPIGNPLDGGRPLETRNRRPLDSPSPPIIARD 149
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
V++P+ TG + VD+LVPIG+GQR+LIIGD TG ++LAID ++N
Sbjct: 150 FVQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLN 194
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 141 bits (342), Expect = 1e-32
Identities = 67/157 (42%), Positives = 100/157 (63%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 452
G + I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+
Sbjct: 5 GIINKIYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKC 64
Query: 453 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 632
T I +VPVG+Q++GR++++ G +D I + APG++ R +V EP+ T
Sbjct: 65 YCTNKIFEVPVGKQLIGRIINSRGETLDLLPEIKINEFSPIEKIAPGVMDRETVNEPLLT 124
Query: 633 GIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
GIK++DS++PIG+GQRELIIGDRQTG T + IDTIIN
Sbjct: 125 GIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIIN 161
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 138 bits (333), Expect = 2e-31
Identities = 69/159 (43%), Positives = 101/159 (63%)
Frame = +3
Query: 267 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 446
E G+VLS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD
Sbjct: 27 EEGKVLSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGD 86
Query: 447 IVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPM 626
+T I V E +LGRV+ ALGNPID + V AP ++ R + EP+
Sbjct: 87 TAYKTDRIASVNATEGLLGRVLGALGNPIDNGPELKECLSCPVERDAPSLLQRDFITEPL 146
Query: 627 QTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
TGIK +DS++ IG+GQRELIIGD TG +++AIDT+IN
Sbjct: 147 YTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVIN 185
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 126 bits (303), Expect = 8e-28
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = +3
Query: 204 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 383
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 384 LEPDNVGVVVFGNDKL 431
L+ DNVGVVVFGNDK+
Sbjct: 94 LDVDNVGVVVFGNDKI 109
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 123 bits (296), Expect = 5e-27
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 36/193 (18%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVG 404
G V + DG+A V L N++ E+V F S G ++GM + +E D +
Sbjct: 50 GEVEKVKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYIS 109
Query: 405 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID--------GKGPIDTK 560
V++FG+++ +K GD V+ G IV + VG +LGRV+D LGN +D K P D
Sbjct: 110 VIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLDDPTRPVELNKSPKDDL 169
Query: 561 SR------------MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 704
R V I+APGII R SV +P+ TG+ VDS+VPIG GQRELIIGDRQ
Sbjct: 170 FRNYYIGRIVTGYSRPVEIQAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQ 229
Query: 705 TGXTALAIDTIIN 743
G TA+AID I+N
Sbjct: 230 VGKTAVAIDMILN 242
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 110 bits (264), Expect = 4e-23
Identities = 61/180 (33%), Positives = 99/180 (55%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
V++ + G L V +DQL L A+ Q V+ L+ HRL HR +D RL+ D T
Sbjct: 387 VENGVERDGGLAGLAVADDQLALAAADRDQGVDRLEAGGHRLMHRLARDDARRLHVDAAT 446
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
R+D +LA++RV +++ + + L+D +V+D LD ++FL+ V + + IV +
Sbjct: 447 LGRLDRALAVDRVAEAVDHAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLE 506
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKDPLFEDGGDLG 204
V+GH+ A EL HL LDV++A++ D + + + + L D LF+D GDLG
Sbjct: 507 VEGHAAHARLELDHLTGLDVVEAVDAGDAVADREHLPDFRDLGLLAKILDLLFQDRGDLG 566
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 109 bits (263), Expect = 5e-23
Identities = 70/170 (41%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKE 440
G++ SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K
Sbjct: 13 GKIKSIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKS 72
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG---------PIDTKSRMRVGIKAPG 593
D+V RT V G +LGRVV LG + + I + V I APG
Sbjct: 73 NDLVYRTYKDVKTKAGYGVLGRVVSPLGECYNEEDFDELSYLFDDISLIEDVSVEIPAPG 132
Query: 594 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
II R VR P TGI VD L+P+G GQRELIIGD+ TG T+LAI ++N
Sbjct: 133 IIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLN 182
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 105 bits (253), Expect = 9e-22
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Frame = +3
Query: 369 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID--- 536
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGL 139
Query: 537 ---GKGPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 704
+ ++++ + +V AP I+ R V + TG KAVD+++PIGRGQRELI+GDRQ
Sbjct: 140 LTRSRALLESEQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQ 199
Query: 705 TGXTALAIDTIIN 743
TG T++A+ TIIN
Sbjct: 200 TGKTSIAVSTIIN 212
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 105 bits (253), Expect = 9e-22
Identities = 57/161 (35%), Positives = 86/161 (53%)
Frame = +3
Query: 261 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 440
L+E GRV I DG+ GL+N + V +G+ L L + VG+ + I E
Sbjct: 20 LKENGRVEKISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILE 79
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 620
G V T ++V + E + GR++D G + + + P I+ SV
Sbjct: 80 GMSVSVTDHFIEVNLFEDMAGRIIDTTGKMLYDVSDEQPTASSPLFCVTPAIMTIDSVTR 139
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
P+ TG+ +DS+ PIGRGQR+LI+G+RQ+G T +A+DTIIN
Sbjct: 140 PLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIIN 180
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 98.7 bits (235), Expect = 1e-19
Identities = 57/178 (32%), Positives = 89/178 (50%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
V + + T LTVT+DQL LT AN Q V+ HRL H + L+
Sbjct: 221 VQEGVENDRGFTGLTVTDDQLALTAANRDQGVDGFQAGGHRLVHGLARQNAGCLDVHAAL 280
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
+D + A++RV + + + L+D + +D LD ++F + V + T++V FQ
Sbjct: 281 FGGLDRAFAVDRVAERVDDAAQKALADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQ 340
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKDPLFEDGGD 210
V+GH+L+ E H SLD++Q INT DT+T+ + T + D + ED GD
Sbjct: 341 VQGHALDTTREFDHFTSLDLVQTINTGDTVTDGEHLTDFRNFGFLAKALDLVLEDCGD 398
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized protein
- Dinoroseobacter shibae DFL 12
Length = 950
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/181 (32%), Positives = 89/181 (49%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
V DR+ G L V +DQL L + V+ HRL H +D RL+
Sbjct: 634 VQDRVERHGGLAGLAVADDQLALAAPDRDHGVDRFQAGRHRLMHGFARDDARRLHVRDAA 693
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
+D +LA+ RV Q+I+ + ++ G+V+D LD+++FLD V + + THIV F+
Sbjct: 694 LGGLDRALAVQRVAQAIHDPAQQRVAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFE 753
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKDPLFEDGGDLG 204
V+GH +A EL H L V+Q ++ + + +A+ L D L ED D G
Sbjct: 754 VQGHPADAARELDHFTGLHVVQPVDPCNPVADAEHAAHLGDFGFLAKVLDLLLEDRRDFG 813
Query: 203 S 201
S
Sbjct: 814 S 814
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 89.0 bits (211), Expect = 1e-16
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
VDD ++G G LTVT+DQLTL TA+ V+ L SL+RL +R + W D
Sbjct: 364 VDDGVDGHGGLADLTVTDDQLTLATADRDHGVDGLVASLYRLVYRLTPDHAWSNFLD-RV 422
Query: 563 GFRV-DWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRF 387
G V + A++RV Q + + L++ N+ D+ L +F + ++ T+ + T+ V
Sbjct: 423 GLGVAQRTFAVDRVAQCVDDATQQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYGVLL 482
Query: 386 QVKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTT 273
QV+GH+++A EL H DV Q ++ DT+ N D T
Sbjct: 483 QVQGHAVDAARELDHFAVHDVGQTVDPHDTVGNRNDGT 520
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 86.6 bits (205), Expect = 6e-16
Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 4/159 (2%)
Frame = +3
Query: 276 RVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMAL--NLEPDNVGVVVFGNDKLIKEGDI 449
++ SI D I V G + E+V+FS+ +G+ L + VG+V + ++ G
Sbjct: 6 KITSIKDNIVTVVGNHPYKFLEVVKFSNKTQGIVLKGSAFQAEVGLVNVDSHNQLEVGSE 65
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPI--DGKGPIDTKSRMRVGIKAPGIIPRVSVREP 623
TG + V + + ++G VVD N + K D + + V +A I R +V P
Sbjct: 66 AIATGELFKVKIHDNLIGSVVDVSLNEVLTFSKRGQDDIAILDVFEEAKPIYSRKAVNAP 125
Query: 624 MQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTII 740
++TGI A+D+++PIGRGQ++LIIGD+ TG TA+A++ I+
Sbjct: 126 LETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAIL 164
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 85.4 bits (202), Expect = 1e-15
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Frame = +3
Query: 279 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK---EGDI 449
+ SI D I V G N ++ ++ + L+ ++ ++V + +K E D+
Sbjct: 5 IKSIQDNIIYVEGEFNYSQSQVFLINNKIHAYLLSASVNSANLLVESEIESLKINDELDL 64
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGN---PIDGKGPIDTKSRM----RVGIKAPGIIPRV 608
V+ +G I ++ G+++D G+ PI+ ID ++ KA G++ R
Sbjct: 65 VENSGKISTY---QKFYGKIIDIFGHIKYPIEANDIIDENEEKIGTGKIFNKALGMMFRK 121
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TG T++A++TII+
Sbjct: 122 SLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIIS 166
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 84.6 bits (200), Expect = 2e-15
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = +3
Query: 225 EERILGAAPKADLEETGRVLSIG--DGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDN 398
E+R++G K + S+G I + +K I E++ G K + L P
Sbjct: 15 EKRLVGYYGKVSQVIGLTIESVGPLSNIGEICYIKTIDGNEVLAEVVGFKEEKVYLMP-- 72
Query: 399 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 578
GN + I G V TG + V VG+ +LGRV+D LGNPIDGKGP+ + + V
Sbjct: 73 -----LGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPLKYEKSIPVN 127
Query: 579 IKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
P + R +RE M GIKA+D L+ G+GQR I G + L
Sbjct: 128 NTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 175
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 83.8 bits (198), Expect = 4e-15
Identities = 52/179 (29%), Positives = 87/179 (48%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
VDDR+ +LTV +DQLTL TA+ + RV+ LD LHRL HR + D
Sbjct: 1337 VDDRVERHRGLAALTVADDQLTLATADRHHRVDRLDARLHRLRHRLTPDHARGDLFDRVG 1396
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
RVD +LA++RV + + + + +D + ++ LD+++F D V + + V +
Sbjct: 1397 QLRVDRALAVDRVAERVDHAADEFRADRDFENAARRLDDVAFRDVFVFAENHRADRVALE 1456
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKDPLFEDGGDL 207
V+ + +L H V QA++T DT+ + + + + DP + DL
Sbjct: 1457 VQRETERVARKLEHFALHHVRQAVDTHDTVGHGDHGALVANVCARFKALDPALDQLADL 1515
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 80.6 bits (190), Expect = 4e-14
Identities = 48/155 (30%), Positives = 80/155 (51%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
VDD ++ G LTV +DQL L+ + V+ L+ LHRL HR +DT L+
Sbjct: 328 VDDGVDRYGGLAGLTVADDQLALSAPDRNHGVDRLEAGLHRLMHRLTLDDTGGLHFHLAE 387
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
G VD + AI+RVT + + + N+ D D ++FLD + + +V +
Sbjct: 388 GVGVDRAEAIDRVTDRVDHAADQGRAYRNLDDLAGQFDRVAFLDLGELAEDRRADVVFLE 447
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQD 279
V+ H+ +A GEL L +++ ++T DT+T+ +
Sbjct: 448 VQNHAGDAAGELEELACHRLVKTVDTCDTVTDGDN 482
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 79.8 bits (188), Expect = 7e-14
Identities = 34/53 (64%), Positives = 45/53 (84%)
Frame = +3
Query: 585 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTG T++ +DTI+N
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 79.0 bits (186), Expect = 1e-13
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Frame = +3
Query: 279 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKR 458
+ SI D I V G + + E+ + + +KG L+++ +++ G+ IK G +
Sbjct: 8 IKSIKDYIVEVQGDYDFRLYEVFQLTDDVKGFCLSVDEKRTFLLIDGDTSKIKVGTEIIP 67
Query: 459 TGAIVDVPVGEQILGRVVDALGNPIDGKGP---IDTKS--RMRVGIK-APGIIPRVSVRE 620
+ + G+++D G + + I K+ K A GI RV + E
Sbjct: 68 LESRFIAKTYKDYFGKIIDIDGKVLYSESEDQEISEKAYENENSAFKVASGIQDRVKLNE 127
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
P++TGI ++D L+PIG+GQR+LI+GD +TG T++A+ T+IN
Sbjct: 128 PLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMIN 168
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 76.6 bits (180), Expect = 6e-13
Identities = 47/147 (31%), Positives = 73/147 (49%)
Frame = +3
Query: 270 TGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 449
TG V+ + + V GL I MV F SG +GM ++ + +V+ + G +
Sbjct: 36 TGEVVGLDRFLLTVKGLDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTL 94
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 629
I VGE ++GR+V L P+D KG + + +AP I+ R + E +
Sbjct: 95 AVLQDNIPTTRVGEGLIGRIVTPLCRPLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLP 154
Query: 630 TGIKAVDSLVPIGRGQRELIIGDRQTG 710
+G+ AVD+L PI GQR I+GD + G
Sbjct: 155 SGVTAVDALFPIVLGQRIAILGDTKAG 181
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/124 (30%), Positives = 68/124 (54%)
Frame = +3
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
+A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D GP+
Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
T +R + +AP + + + + + TGIK VD L P +G + + G G T L ++
Sbjct: 135 KTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIME 194
Query: 732 TIIN 743
I N
Sbjct: 195 LINN 198
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 76.2 bits (179), Expect = 8e-13
Identities = 41/124 (33%), Positives = 64/124 (51%)
Frame = +3
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
+A +L + V + + + G+ V TG + VPVG + LGR+++ +G PID +GPI
Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
+K R + P + + E ++TGIK VD L P RG + + G G T I
Sbjct: 143 KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVF-IQ 201
Query: 732 TIIN 743
+IN
Sbjct: 202 ELIN 205
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/113 (36%), Positives = 63/113 (55%)
Frame = +3
Query: 405 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 584
+ + G + L++ G V TGA + VPVG LGR+++ LG PID +G I T+ + +
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 197
Query: 585 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
AP ++ + +E + TGIK VD L P RG + + G G T L ++ I N
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINN 250
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/113 (34%), Positives = 63/113 (55%)
Frame = +3
Query: 405 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 584
+ + G + L++ G V +GA + +PVG + LGR+++ +G PID +GPI TK + +
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
Query: 585 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
AP + +E + TGIK VD L P +G + + G G T L ++ I N
Sbjct: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN 222
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 72.5 bits (170), Expect = 1e-11
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
Frame = +3
Query: 276 RVLSIGDGIARVYGLKNIQAEEM--VEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 449
+V+SI D + V G + + ++ +K + L+ E + ++V + I+ GD
Sbjct: 6 KVVSIIDYVIEVQGKFPFEEGQFFTIKNKPSVKALVLSAEINRAFLLVDTSKVPIEIGDE 65
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGN---PIDGKGPIDTKSRMRVG---IKAPGIIPRVS 611
+ A ++ Q G+VV+ G P+ + + +R G + G++ R
Sbjct: 66 LIVKPAYNEIQTSRQFFGKVVNIDGEIVYPVTQNKTVVYEPNLRKGNIFFQPVGMLERQH 125
Query: 612 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
+ E + TGI ++D PIGRGQRE+I+GD+QTG T +A++TIIN
Sbjct: 126 LSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIIN 169
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 477 VPV-GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDS 653
+PV G Q+LGRV+DALG P DG GP+ T+ V + P + R +RE + TG++A+D+
Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDA 168
Query: 654 LVPIGRGQRELIIGDRQTGXTAL 722
P+GRGQR + G + L
Sbjct: 169 FTPLGRGQRLGLFAGSGVGKSTL 191
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 72.5 bits (170), Expect = 1e-11
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +3
Query: 378 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVP--VGEQILGRVVDALGNPIDGKGPI 551
LN +PD V+ D+ K I++ + + + V I G + PI PI
Sbjct: 195 LNQQPDCA--VILNADR--KSSVILEAARSQIPIAFLVDSTIPGESHKRITYPIPANDPI 250
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 707
R + GI+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 251 QFVYLFRHSVTKTGILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 72.1 bits (169), Expect = 1e-11
Identities = 51/154 (33%), Positives = 73/154 (47%)
Frame = +3
Query: 261 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 440
+E G + S+GD + ++ E+V F +++ L+P K I+
Sbjct: 33 IESEGPLSSLGDSCEVISSKGDVYPGEIVGFRDNAV-LSMTLQPP----------KGIRF 81
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 620
GD V + VG++ILGRV+DA G P+DG P + V AP R+ VRE
Sbjct: 82 GDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITPARPRGSRPVDGSAPLPYARIPVRE 141
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
M GI+A+D V GRGQR I G G + L
Sbjct: 142 VMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTL 175
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 71.7 bits (168), Expect = 2e-11
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Frame = +3
Query: 231 RILGAAPKADLEETGRVLSIGDGIARVYGLK-NIQAEEMVEFSSGLKGMA--LNLEPDNV 401
R GAA + +GRV++ G+ V GL I + +E SG + +A + +
Sbjct: 11 RFRGAAIERGPVPSGRVVACDGGLIEVSGLSVPIGSLGAIESDSGDEPLAEVIGFRRGHS 70
Query: 402 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGI 581
+++ G+ +L++ V+ G+ V VG+ +LGR VD LG PIDG I +
Sbjct: 71 LMMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDGGPAIHASETWPLLG 130
Query: 582 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTI 737
K + R V E G++AV++L +G GQR II G + L IDT+
Sbjct: 131 KRESALARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV 181
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = -3
Query: 649 STALIPVCIGSRTDTRGMIPGALIPTLIRDFVSIGPLPSIGLPKASTTRPRICSPTGTST 470
S A+IPVC+GS+TD R +IPGA V I P PSIG P+ STTRP I SPTGT
Sbjct: 3 SIAVIPVCMGSQTDLRAIIPGAGDSIKRLSDVLISPFPSIGRPRESTTRPTIASPTGTWA 62
Query: 469 IAPV 458
I PV
Sbjct: 63 IFPV 66
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/110 (34%), Positives = 58/110 (52%)
Frame = +3
Query: 393 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 572
D + ++ G ++ G V TG + PVG +LGRV+D LGNPID KGP+
Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFRP 121
Query: 573 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ AP + R + P+ G++A+D+L+ +G GQR I G + L
Sbjct: 122 ILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 70.9 bits (166), Expect = 3e-11
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Frame = +3
Query: 276 RVLSIGDGIARVYGLKNIQAEEM--VEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGD 446
+V S+ D + V G N Q ++ V+ +K + + D ++F N K I+ D
Sbjct: 4 KVASVLDYVVLVKGEYNWQEQQFFQVKDKPEIKAVVIQASQDQA-YLLFNNQKGKIQIND 62
Query: 447 IVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT---KSRMRVGIKAPGIIPRVSVR 617
+ V + G+++D GN I+ + T + R A G++ R +
Sbjct: 63 ELIELPNFDKVLTSMEYFGKIIDLSGNIIEPRAARPTTFLQYRHSAFETAAGVLRRELID 122
Query: 618 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
+ TGI A+D PIG GQRELI+GDRQTG T + I+TIIN
Sbjct: 123 RQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIIN 164
>UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli B
Length = 559
Score = 70.9 bits (166), Expect = 3e-11
Identities = 47/157 (29%), Positives = 77/157 (49%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
VDD I+ Q T LTVT+DQ TLTT +W VN T L+RL +R ++
Sbjct: 327 VDDGIDSQCGFTCLTVTDDQFTLTTTDWDHGVNGFITGLYRLIYRLTFDNARSDCFYSRE 386
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
+ + ++ TQS+ +T + ++ N D+ STL+ +F V T T+ V +
Sbjct: 387 AVVIQRTFTVDWCTQSVNHTAQQATANRNFQDTASTLNFHAFGKVSVRTHNNRTYRVALE 446
Query: 383 VKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTT 273
V+ S+ + H + QA+N +T+T ++T
Sbjct: 447 VQCDSVTVTRQGDHFTLHTIGQAVNADNTVTYRNNST 483
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/88 (37%), Positives = 54/88 (61%)
Frame = +3
Query: 459 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 638
+G + +PVG+++LGRV++ +G PID KG I TK + P + R +R+ + TG+
Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKEERPPDNEVPNPLDRPIIRDVLMTGV 156
Query: 639 KAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+A+D ++ IGRGQR I G ++L
Sbjct: 157 RAIDGILTIGRGQRVGIFSGSGVGKSSL 184
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/107 (34%), Positives = 60/107 (56%)
Frame = +3
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
D L++ ++V TG+ + VPVG + LGR+++ +G P+D +GPI +K M + AP
Sbjct: 67 DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTE 125
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
+ + + TGIK +D L P +G + + G G T L I +IN
Sbjct: 126 QSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVL-IQELIN 171
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/94 (37%), Positives = 52/94 (55%)
Frame = +3
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 620
GD V+ + + VG+ + GRV+DA G PIDGK D R+ AP + R + E
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDE 152
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
P+QTG++A+D+++ G GQR I G + L
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTL 186
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 67.7 bits (158), Expect = 3e-10
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Frame = +3
Query: 252 KADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND-- 425
K+ + R+ ++ D I V G N + +++ S + + + N+
Sbjct: 14 KSASNDMPRISAVFDYIIEVKGKFNYRQQQVFTSSKNKNARLFLISAFSDTAYLLSNEEG 73
Query: 426 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK----APG 593
+ + D + +V ++ G+V+D GN I K V + A
Sbjct: 74 RKLAINDQIVLLNETNEVFTSKEHFGKVIDIYGNAILPVAQAIQKDDSAVSSEIFKLAHD 133
Query: 594 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
++ + E + TGI A+D L+PIG+GQRELIIGDRQTG T +A++ IIN
Sbjct: 134 LMKVQRLNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIIN 183
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/107 (36%), Positives = 59/107 (55%)
Frame = +3
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
D L++ G V+ TG + VPVG LGR+++ +G PID +GPI ++ R + AP
Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIHRPAPSFEE 131
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
+ + E + TGIK VD L P +G + + G G T + I +IN
Sbjct: 132 QAAASEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVI-IQELIN 177
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +3
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 629
V TG + +VP+G +LGRV+D+ P+DGKG + T + +AP + R V P
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFP 159
Query: 630 TGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
G++A+D L+ G GQR I G+ G + L
Sbjct: 160 LGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 66.5 bits (155), Expect = 6e-10
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +3
Query: 417 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS-RMRVGIKAPG 593
G K I +G V +G + VGE +LGRV++ LG P+DG GP+ ++ V + P
Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDNRPPN 136
Query: 594 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ R + E + TG++AVD L+ GRGQR I G + L
Sbjct: 137 PLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 66.1 bits (154), Expect = 9e-10
Identities = 35/106 (33%), Positives = 59/106 (55%)
Frame = +3
Query: 405 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 584
V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+DG+ I ++ + + +
Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQFQWPLAGR 133
Query: 585 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ R V + G++A++ L+ +G GQR II G + L
Sbjct: 134 KVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVL 179
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/97 (37%), Positives = 53/97 (54%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 611
++ G V GA + VPVG+ +LGRV++A G IDGKG I R V + + R+
Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEVLRASSNPMERLP 139
Query: 612 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ M TG++ +DSL+ +G GQR I G + L
Sbjct: 140 ITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTL 176
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +3
Query: 378 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPI 551
+++ V ++ F + I GD + +G + +P+G +LG VVDA G P+D + G +
Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLDEQELGVV 116
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
T+ P + R ++ EP+ T IKA+DS +PIG+GQR I+ G + L
Sbjct: 117 QTQCVFLASHINP--LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 62.9 bits (146), Expect = 8e-09
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Frame = +3
Query: 477 VPVGEQILGRVVDALGN--PIDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQ----TG 635
V + G+++D N P K ++ KS+ + P P+ + +P++ TG
Sbjct: 77 VATSREFFGKIIDIQNNIYPHKAKASLN-KSKYYSSLSTPFNNPKELLNYQPLKKQLLTG 135
Query: 636 IKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
VD L+PIGRGQR+LIIGDR+TG T LA++TIIN
Sbjct: 136 YVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIIN 171
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 62.9 bits (146), Expect = 8e-09
Identities = 35/120 (29%), Positives = 62/120 (51%)
Frame = +3
Query: 363 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 542
+K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D +
Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD-E 116
Query: 543 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
S + P + R +RE M G++++DSL+ +G+GQR I G + L
Sbjct: 117 SFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTL 176
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +3
Query: 399 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 578
V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID KG I + ++ +
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPIH 108
Query: 579 IKAPGIIPRVSVREPMQTGIKAVDSLVP 662
P ++ + ++TGIK +D L P
Sbjct: 109 KLPPKFSDQIFNNDILETGIKIIDLLCP 136
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 477 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 656
+P+ +LGRV+D GNP+DG P+ + P + R ++E TGI+A+D+L
Sbjct: 92 LPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDAL 151
Query: 657 VPIGRGQRELIIGDRQTGXTAL 722
+ IG GQR I + G ++L
Sbjct: 152 LTIGEGQRVGIFSEPGGGKSSL 173
>UniRef50_A4EBH1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 492
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/123 (30%), Positives = 66/123 (53%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVTNDQLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHT 564
++D ++G G T LTV +D+LTLT A+ + V+S T L+RL HR +D L D T
Sbjct: 332 IEDSVDGDGGLTGLTVADDELTLTAADRHHGVDSEQTGLNRLAHRGTIDDAGSLELDGAT 391
Query: 563 GFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQ 384
D + A++ + + I + + G+++++ S ++FLD + T+ +V +
Sbjct: 392 VRSDDVAQAVDGLAERIDDAAEHGTAHGDIHNAASGAALVAFLDGVDGTEQNGADLVTVK 451
Query: 383 VKG 375
V G
Sbjct: 452 VLG 454
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/102 (32%), Positives = 55/102 (53%)
Frame = +3
Query: 417 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 596
G+ ++ GD V G + +PVGE + GRV+D LG P+D +D + V P
Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALDDLPTVVVDNLPPAA 131
Query: 597 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ R + + + G++A+D+L+ GRGQR I+ G ++L
Sbjct: 132 LSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSL 173
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Frame = +3
Query: 261 LEETGRVLSIGDGIARVYGL-KNIQAEEMVE----FSSGLKGMALNLEPDNVGVVVFGND 425
+ GRV + G+ ++ GL + Q + VE F L G L +E + ++
Sbjct: 19 VRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQVEGSTINMLPDSAP 78
Query: 426 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG-IIP 602
+ + G+ V I G LGRVVD G P+DG+ P+ S+ R ++AP +
Sbjct: 79 EGVSLGNRVV-LHPIPGFAPGRHWLGRVVDPFGRPLDGR-PLMRGSKARDLMRAPPPAVQ 136
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
R + + M TG+ A+++L+PI RGQR + G ++L
Sbjct: 137 RKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSL 176
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 61.3 bits (142), Expect = 2e-08
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = +3
Query: 261 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 440
+E TG SIG+ K IQ+ + + G K L P +F K+ E
Sbjct: 39 IEVTGIYSSIGEYCWVECFYKGIQSTIICKVM-GFKKKIFFLIPIQNSYGIFPGAKVFSE 97
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSV 614
I + P G ++LGRV++ G+P+D G ++ K ++ K I P R +
Sbjct: 98 NYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDNLGDLNLKKKLFNFFKKKPINPLNRKPI 157
Query: 615 REPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
E + TG+ A++SL+ +GRGQR I G + L
Sbjct: 158 TEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Frame = +3
Query: 267 ETGRVLSIGDGIARVYGLKN-IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 443
ETG+++ + V GL++ I + +++ ++ + D + ++ G+ + ++ G
Sbjct: 33 ETGQLVHLSGMRLEVAGLRSPIGSRCLIQGKVPVEAEVIGFHGDRLVMMCEGSAEGLRPG 92
Query: 444 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREP 623
V+ +PVG +LGRV+D G P+DG P + + + + + R ++++P
Sbjct: 93 ARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSPPTSDITVPMQGEPLNPMDRGALQKP 152
Query: 624 MQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ GI+A++SL+ + RGQR + G + L
Sbjct: 153 LDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL 185
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +3
Query: 477 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 656
VPVGE +LGRV+D G P+DG+ D + + P ++ R + +P+ TGI+A+DS+
Sbjct: 91 VPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMV-RQPITQPLMTGIRAIDSV 149
Query: 657 VPIGRGQRELIIGDRQTGXTAL 722
G GQR I G + L
Sbjct: 150 ATCGEGQRVGIFSAPGVGKSTL 171
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 60.9 bits (141), Expect = 3e-08
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Frame = +3
Query: 261 LEETGRVLSI-GDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLI 434
L+ +G ++S G + + NI E ++ +S ++G + D V V+ + +
Sbjct: 24 LKVSGEIVSAKGIYLEAILPFANIGNEVEIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGL 83
Query: 435 KEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIP-- 602
++GD V +V G ++G+VVD GNP+DG G ++ K G++ P I P
Sbjct: 84 RKGDKVLLKNELVSTKTGNGVVGKVVDPFGNPLDGGFIGFVEEK-----GLELPQINPLY 138
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
R +RE TG+++V++L +G+GQ+ I G + L
Sbjct: 139 RERIREVFDTGVRSVNALFTLGKGQKIGIFAGAGVGKSTL 178
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 629
VKR A + VG +LGRV+D LG PID KGP+ + + + R +R+P+
Sbjct: 87 VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLD 144
Query: 630 TGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
GI+A+++L+ G GQR I+ G + L
Sbjct: 145 LGIRAINALLTCGEGQRVGIMAGSGVGKSTL 175
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +3
Query: 381 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI--D 554
+L+ V + + G + + G + VPVGE +LGR++D +G + KGP D
Sbjct: 50 HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGPPLPD 108
Query: 555 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDT 734
R + P + + + EP TGIK +D L P+ +G + + G G T L ++
Sbjct: 109 DVPRRPIHRSPPPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMEL 168
Query: 735 I 737
I
Sbjct: 169 I 169
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +3
Query: 408 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKA 587
+ G+ + +K G V TGA + VPVG+ LGR++D LGNPID GPI + R + +A
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHREA 112
Query: 588 PGIIPRVSVREPMQTG 635
P + E ++ G
Sbjct: 113 PSYADQAGGNELLKNG 128
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/113 (30%), Positives = 57/113 (50%)
Frame = +3
Query: 405 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 584
V + D L++ G V+ TG + PVG +LGR+ + +G PID +G + +
Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRP 118
Query: 585 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
AP + + + E ++TG+K +D L P +G + G G T L ++ I N
Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRN 171
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/117 (29%), Positives = 58/117 (49%)
Frame = +3
Query: 393 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 572
+ V V + ++ G V TG + +PVGEQI GR+++ +G+ IDG ++
Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYS 116
Query: 573 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
+ P +V+E + TGIK +D L P +G + + G G T L ++ I N
Sbjct: 117 IHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINN 173
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +3
Query: 399 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 578
V + G+ +K G IV G + VPVGE LGR+++ LG ID KG + +K +
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNIE 111
Query: 579 I-----KAPGIIPRVSVREPMQTGIKAVDSLVPIGR 671
P I + S +E ++TGIK +D + P +
Sbjct: 112 YWEIHRSPPNYIDQSSSKEILETGIKVIDLICPFSK 147
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 480 PVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 659
PVGE + GRV+D LG P+D GP+ + + P + R + P TG++ +D L+
Sbjct: 27 PVGEALFGRVLDGLGRPLDDLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLM 86
Query: 660 PIGRGQRELIIGDRQTGXTAL 722
+G GQR I G + L
Sbjct: 87 TLGIGQRVGIFAPSGVGKSTL 107
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/94 (32%), Positives = 48/94 (51%)
Frame = +3
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 620
GD + V VG +LGRV+D G P+D I+ + + + R + +
Sbjct: 81 GDPLAARSEDARVEVGPGLLGRVIDGFGKPMDTGPAINARESYSLHGTPTNPLDRQHITQ 140
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
P+ TGI+A+D+L+P G+GQR I G G + L
Sbjct: 141 PLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 459 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 638
TG V GE +LGR++DA G+ IDG+G +M + +P + R + P TG+
Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRGGFGPTVQMPIYAASPNPLARQLIDRPFATGV 161
Query: 639 KAVDSLVPIGRGQR 680
+A+D+++ G GQR
Sbjct: 162 RALDTVITAGVGQR 175
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/100 (31%), Positives = 55/100 (55%)
Frame = +3
Query: 372 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 551
+A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID K +
Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110
Query: 552 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 671
++ + +AP + + E + TGIK + S + I R
Sbjct: 111 ESSDEWEIHREAPAFADQDTGTEVLVTGIKVLTSSLLIVR 150
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 56.8 bits (131), Expect = 5e-07
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +3
Query: 366 KGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 545
+ + L+ + + + GN + + ++ TG + VG +LG V+D G ++
Sbjct: 48 RAQVVGLQRERTVLSLIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTGKIVERFT 107
Query: 546 P-IDTKSRMRV-GIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTA 719
P + S RV + P RV VREP+ TG++A+D L+ G GQR I G T
Sbjct: 108 PEVAPISEERVIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTM 167
Query: 720 L 722
L
Sbjct: 168 L 168
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 56.4 bits (130), Expect = 7e-07
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +3
Query: 345 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 518
+E S G + GM + E + G F + + GD V ++ PVG +LGRV++
Sbjct: 46 IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105
Query: 519 LGNPIDGKGPIDTKSRMRVGIKAP-GIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 695
LG ID KG +D + R+ I P + R + E G+K++D L+ G+GQ+ I
Sbjct: 106 LGQVIDNKGALDYE-RLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFA 164
Query: 696 DRQTGXTAL 722
G + L
Sbjct: 165 GSGVGKSTL 173
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 480 PVGEQILGRVVDALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 656
P GR V+A G + G+ + T R+ + P + R + P+ TG+KAVD L
Sbjct: 148 PSARWAAGRTVNAFGECLKGERMVTGTDDSSRMMREPPTVEDRKPITTPLVTGVKAVDVL 207
Query: 657 VPIGRGQRELIIGDRQTGXTALAIDTI 737
P+GRGQ L+ G+ TG + L + TI
Sbjct: 208 APLGRGQCMLVSGEPGTGLSELCLTTI 234
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNP-IDGKGPIDTKSRMRVGIKAPGIIPRV 608
++ G V+ TG + VPVG+ +LGR++ G P DG R + AP + +
Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQK 156
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTI 737
S TGIK +D L P+ +G + + G G T ++ I
Sbjct: 157 SANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI 199
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 381 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT- 557
+L+ +V + ++ G IV G + +PV ++ LGR+++ G P+DG P++T
Sbjct: 65 HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETH 124
Query: 558 KSRMRVGIKAPGIIPRVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
+ R + AP + S +E ++TGIK +D L P RG + + G G T L ++
Sbjct: 125 EYRDVLANFAP--LEMTSTQETILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLME 181
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 55.6 bits (128), Expect = 1e-06
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Frame = +3
Query: 243 AAPKADLEETGRVLSIGDGIARVYGL-KNIQAEEMVEFSSGLK---GMALNLEPDNVGVV 410
A P + G V +I G V GL ++++ + V S G + +EP+ V V
Sbjct: 26 ANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGEVVRVEPERVVVC 85
Query: 411 VFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI-DTKSRMRVGIKA 587
I D+V R GA P + GR ++AL PIDG G + R + A
Sbjct: 86 PIEPGDPIGIHDVVIRKGAFRIAPT-DNWCGRTINALAEPIDGLGALLQGDIRRSIANTA 144
Query: 588 PGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
P + R V + +TG++A+D P+ GQR I G + L
Sbjct: 145 PPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTL 189
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/97 (29%), Positives = 50/97 (51%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 611
I+ G+ V +++ + +++LGRV+D+LG PID KG S + + I R
Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSI 137
Query: 612 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ + TG+K +D +P+ +GQR I G + L
Sbjct: 138 FEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTL 174
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = +3
Query: 483 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 662
+G+ LGRV++ LG P+DGKG + + ++ + + R +V P+ G+ A++ L+
Sbjct: 97 IGDSWLGRVINGLGEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLT 156
Query: 663 IGRGQRELIIGDRQTGXTAL 722
IG+GQR ++ G + L
Sbjct: 157 IGKGQRVGLMAGSGVGKSVL 176
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 54.4 bits (125), Expect = 3e-06
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +3
Query: 384 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 563
+ D V ++ + + G +V T ++VPVG+ + +V D LGN ++ K K+
Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDKS---AKN 101
Query: 564 RMRVGIKAPGIIPR-VSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTI 737
++V I + + + ++ E ++TGIKA+D +PI RG + I+G G T + + I
Sbjct: 102 LLKVEIDSTITKSKNLEIKNEILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEII 161
Query: 738 IN 743
N
Sbjct: 162 FN 163
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/102 (29%), Positives = 51/102 (50%)
Frame = +3
Query: 417 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 596
G+ + I GD ++ + VG +LGRV+DA GNP+D + + +
Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMDEYALSNLGTLFPLHGTRLNP 139
Query: 597 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
R ++ PMQ G++A+D+ +P+G GQR + G + L
Sbjct: 140 FTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 52.8 bits (121), Expect = 9e-06
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Frame = +3
Query: 267 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMA--LNLEPDNVGVVVFGNDKL 431
++GRV S+ + R + +++ E+ E G G+A + ++ + + + G +
Sbjct: 20 QSGRVTSVSGLLVRAL-IPSVRIGELCELHEPGRGRIGLADVVGIDGETALLSLHGETRG 78
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI-DGKGPIDTKSRMRVGIKAPGIIP-- 602
I + + TG + VG +LG VVDA GN + P +R + + P
Sbjct: 79 ISQRTEIVPTGREPAISVGNFLLGAVVDAHGNVLRPSANPAGDDARFLQPLYGQPVNPLS 138
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
R +R+P +GI A+D L+ G+GQR I G G + L + N
Sbjct: 139 RRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVAN 185
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 52.8 bits (121), Expect = 9e-06
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +3
Query: 399 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 578
V + G + G V G + VPVG LGR+V+ LG PID KGP++ K ++
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKIE 111
Query: 579 IK-----APGIIPRVSVREPMQTGIKAVDSLVPIGR 671
+ APG +++ ++TGIK +D + P +
Sbjct: 112 HREIHRSAPGYEEQLNSCTILETGIKVIDLICPFSK 147
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +3
Query: 483 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 662
VG +LGRV+DA G P+DG D + + + R +V P+ G++A+++ +
Sbjct: 98 VGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNPLARTAVSRPLDVGVRAINAALT 157
Query: 663 IGRGQRELIIGDRQTGXTAL 722
+G+GQR I+ G + L
Sbjct: 158 VGQGQRIGIVAGSGEGKSVL 177
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 52.0 bits (119), Expect = 1e-05
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 279 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKR 458
+L G+ R G+ Q ++ + G + ++ ++ FG I GD V+
Sbjct: 16 LLLTATGLERAIGIG--QRCRVLGAGGAVLGEVVGVDGAGSHILPFGTWDGIVAGDQVEV 73
Query: 459 TGAIVDVPVGEQILGRVVDALGNPIDGKGPI-DTKSRMRVGIKAPGIIPRVSVREPMQTG 635
+ V + +GRVVD LG P+D GP+ + +S V P R V ++TG
Sbjct: 74 SPQGERVRPCDGWIGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVGARLETG 133
Query: 636 IKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
I+A D+ P+ RGQR + G + L
Sbjct: 134 IRAFDAFTPLCRGQRMGVFAGSGVGKSTL 162
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 51.6 bits (118), Expect = 2e-05
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +3
Query: 381 NLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 557
+L D V + G + L + D+ + G I +P G+ I GR+ + +G IDG T
Sbjct: 50 HLGEDTVRTIAMEGTEGLQRGMDVTDKEGPI-SMPTGDGIKGRLFNVVGEAIDGIENPKT 108
Query: 558 KSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTI 737
R+ + AP + E + TGIK +D L P +G + + G G T L I +
Sbjct: 109 DRRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGGKIGLFGGAGVGKTVL-IQEL 167
Query: 738 IN 743
IN
Sbjct: 168 IN 169
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 51.2 bits (117), Expect = 3e-05
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Frame = +3
Query: 255 ADLEETGRVLSIGDGIARVYGLKNIQAEEMV----EFSSGLKGMALNLEPDNVGVVVFGN 422
A +E+ GRV+++ GI L + ++ + S + + PDN + G
Sbjct: 27 APVEKKGRVMAVS-GILLECSLPQARIGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGA 85
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG------PIDTKSRMRVGI- 581
I +G V + V E++LG V+D G ++ G P R + +
Sbjct: 86 LDGIAQGATVTPLYQPHRIQVSERLLGSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLG 145
Query: 582 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
AP R + +P+ TG++AVD L+ IG+GQR I G T L + N
Sbjct: 146 DAPPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARN 199
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDI 449
GRV+ + + G++ Q E+V S L G +E D + V+ + +K GD
Sbjct: 5 GRVVRVNGPLVIADGMREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDK 64
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 596
V R+GA + V +G ++G++ D L P+D + + G+ P +
Sbjct: 65 VYRSGAPLSVELGPGLIGKIYDGLQRPLDSIAKVSNSPFVARGVSIPAL 113
>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA14484-PA - Nasonia vitripennis
Length = 341
Score = 50.8 bits (116), Expect = 3e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 369 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 545
G L + V VF G + + + TG I+ PV E +LGRV + G PID
Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGP 127
Query: 546 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
PI + + + + R+ E +QTG+ A+D + I RGQ+
Sbjct: 128 PILAEDYLDIQGQPINPWSRIYPEEMIQTGLSAIDVMNSIARGQK 172
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +3
Query: 477 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 656
+P+G +LGRV+D G P+DG DT + + R + + TG++A+++L
Sbjct: 110 LPLGPALLGRVLDGGGKPLDGLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINAL 169
Query: 657 VPIGRGQRELIIGDRQTGXTAL 722
+ +GRGQR + G + L
Sbjct: 170 LTVGRGQRMGLFAGSGVGKSVL 191
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 501 GRVVDALGNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQ 677
GRV++ALGN IDGKG + +R M AP + R V ++TG+ +D P+ GQ
Sbjct: 109 GRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQ 168
Query: 678 RELIIGDRQTGXTAL 722
R I G + L
Sbjct: 169 RIGIFAGSGVGKSTL 183
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 369 GMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 545
G + L D + V V + L V TG + + V +LGRV+D LG P DG
Sbjct: 51 GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110
Query: 546 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
P ++R + A + R + ++TG+ A+D + + RGQ+
Sbjct: 111 PPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQK 155
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 50.4 bits (115), Expect = 5e-05
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Frame = +3
Query: 267 ETGRVLSIGDGIARVYGLK-NIQAEEMVEFSSG--LKGMALNLEPDNVGVVVFGNDKLIK 437
+ GR++ + + + G A +E +SG + + D ++ F +
Sbjct: 60 QVGRLIGVSGILLQATGYPFETGANARIETASGEWIDARVVGFRDDVTQLMPFRAPAGLF 119
Query: 438 EGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVS 611
G V GA + +G GR+VD +G P DG GP+ + + ++ P I P +
Sbjct: 120 AGARVMPAGAGRQLTIGAAWRGRIVDGMGEPFDGGGPLTGDAPL--DLRPPRINPMKKRP 177
Query: 612 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
V + G++A++ ++ IGRGQR + G + L
Sbjct: 178 VAGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVL 214
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 399 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR-V 575
V V+ G L +G V+ G + +PV EQ++GR++D G P D P+ R V
Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHM-PLPPPEDFRDV 114
Query: 576 GIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
+ R EP++TGI A+D L + RGQ+
Sbjct: 115 NGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQK 149
>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
isoform; n=451; cellular organisms|Rep: Vacuolar ATP
synthase subunit B, kidney isoform - Homo sapiens
(Human)
Length = 513
Score = 50.0 bits (114), Expect = 6e-05
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Frame = +3
Query: 279 VLSIGDGIARVYGLKNIQAEEMVEFS----SGLKGMALNLEPDNVGVVVF-GNDKLIKEG 443
V S+ + + +K Q E+V F+ + G L + V VF G +
Sbjct: 44 VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARK 103
Query: 444 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVR 617
+ TG I+ PV E +LGRV + G PID KGP+ + + I I P R+
Sbjct: 104 TTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPE 161
Query: 618 EPMQTGIKAVDSLVPIGRGQR 680
E +QTGI +D + I RGQ+
Sbjct: 162 EMIQTGISPIDVMNSIARGQK 182
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 495 ILGRVVDALGNPIDGKGPID---TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPI 665
+LGRVVD LGNP+DG GP+ + + G + R + P TG++A+D L+
Sbjct: 102 LLGRVVDGLGNPLDG-GPVPRPLASAAAQAGEGTLNPLERPVIATPFATGVRAIDGLLTC 160
Query: 666 GRGQRELIIGDRQTGXTAL 722
G GQR I G + +
Sbjct: 161 GVGQRTGIFAPAGGGKSTI 179
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
intein]; n=8; cellular organisms|Rep: V-type ATP
synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
B) [Contains: Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Frame = +3
Query: 309 VYGLKNIQAEEMVEFSSGL----KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIV 473
V G++ + E+VE + +G L D V VF G L V+ TG +
Sbjct: 25 VEGVEGAKYGEVVEVETPTGEVRRGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETL 84
Query: 474 DVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDS 653
+PV +LGR+++ G PIDG I + + + R + +QTGI A+D
Sbjct: 85 RIPVSTDLLGRILNGRGEPIDGGPEIVPEDELDIHGAPINPAARKYPSDFIQTGISAIDG 144
Query: 654 LVPIGRGQR 680
+ + RGQ+
Sbjct: 145 MNTLVRGQK 153
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Frame = +3
Query: 261 LEETGRVLSIGDGIARVYGLKNIQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GND 425
++E + + + V + ++ EE++E +G +G L ++ D V +F G
Sbjct: 2 IKEYRTIKEVVGPLMAVEKVSGVKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTS 61
Query: 426 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPR 605
+ + V+ G + + V E ++GRV D LG P D I + + + + I R
Sbjct: 62 GINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIAR 121
Query: 606 VSVREPMQTGIKAVDSLVPIGRGQR 680
E +QTGI A+D L + RGQ+
Sbjct: 122 DYPDEFIQTGISAIDHLNTLVRGQK 146
>UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBL100C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 104
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = -3
Query: 328 MFFKP*TRAIPSPMLKTRPVSSRSALGAAPRILSSRMVEISAALWVVE 185
M FKP TRAIPSP +T PVS + A P ILSS+M E S +VE
Sbjct: 1 MLFKPKTRAIPSPTARTLPVSFKLASSDTPLILSSKMEETSVGCALVE 48
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 411 VFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG-------NPIDGK--GP-IDTK 560
V G ++ I+ G + +P+ E++LGR++D +G +P+ GK P I+T+
Sbjct: 266 VLGREQGIEIGSFARSKNNPYSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETE 325
Query: 561 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTII 740
S+ K + P+ + ++TGIK +D L+PI G + ++G G T + + +I
Sbjct: 326 SKQTEKYK---VFPKTQI---LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELI 378
Query: 741 N 743
N
Sbjct: 379 N 379
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 48.4 bits (110), Expect = 2e-04
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Frame = +3
Query: 303 ARVYGLKNIQAEE----MVEFSSGLKGMALNLEPDN------VGVVVFGNDKLIKEGDIV 452
++VY ++ +AEE V F + + G + LE + V V GN+ +K G V
Sbjct: 307 SQVYKIRIDKAEEEVLPKVIFYADVNGKEIQLEVADIFDKNLVSTFVLGNETGLKIGTKV 366
Query: 453 KRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIPRVSVREP- 623
K + + +++LGRV+D +G +D P+ + ++ R V
Sbjct: 367 KSKNQSYAIKISKRLLGRVIDPIGKILDDSIATPVHGNMYAPLEMQHDSEATRYVVSPKN 426
Query: 624 --MQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
++TGIK +D L+PI +G + ++G G T + + +IN
Sbjct: 427 AILETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVI-VQELIN 467
>UniRef50_Q8VNS1 Cluster: EscN protein; n=11;
Enterobacteriaceae|Rep: EscN protein - Escherichia coli
Length = 446
Score = 48.4 bits (110), Expect = 2e-04
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Frame = +3
Query: 180 HVSTTHKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLK-NIQAEEMVEFS 356
H S + I +L + + + G++ +IG I + K I A +E S
Sbjct: 5 HDSVLERYPRIQKVLNSTVPTLSLNSSTRYEGKITNIGGTIIKARLPKARIGAFYKIEPS 64
Query: 357 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 536
L + + ++ D V ++ F + + G + G + VG+++LGR+VD +G P+
Sbjct: 65 QRLAEV-IAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123
Query: 537 GK--GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 710
P R + + P + R + +P G++A+D L+ G GQR I G
Sbjct: 124 SNITAPYLPFER-SLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVG 182
Query: 711 XTAL 722
+ L
Sbjct: 183 KSTL 186
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/150 (19%), Positives = 71/150 (47%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 452
G++ SI + L ++ ++ +G++ + ++ + + I+ G +
Sbjct: 11 GKITSIKGPLIEAV-LPDVSIGDLCYLDNGVEAEVVGFRDGKTLLMTYDDLYGIRIGSFI 69
Query: 453 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 632
+ + + VG +LG V+D GNP++ K + ++++ + + + R ++ P+
Sbjct: 70 SSSLSSSKIGVGADLLGTVLDPFGNPLN-KEKLQFETKVSLKNETINPLLRERIKTPLDI 128
Query: 633 GIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
G+++++ L IG+GQR I G + L
Sbjct: 129 GVRSINGLFTIGKGQRIGIFASAGVGKSTL 158
>UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio
parahaemolyticus AQ3810|Rep: Probable ATP synthase YscN
- Vibrio parahaemolyticus AQ3810
Length = 157
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +3
Query: 492 QILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 671
Q+LG+++D LG P DG + + V AP + R + +P+ G++++D L+ G
Sbjct: 35 QVLGKILDGLGRPFDGAQSQEPSAWYPVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGE 94
Query: 672 GQRELIIGDRQTGXTAL 722
GQR I G + L
Sbjct: 95 GQRMGIFAAAGGGKSTL 111
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 369 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 545
G + + V V VF G D L E V+ ++P+ +LGR+ D +G P D +
Sbjct: 43 GQVIFTSGEVVLVQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRIFDGVGAPRDDRP 102
Query: 546 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
P+ + V + R +E +QTGI A+D L + RGQ+
Sbjct: 103 PMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQK 147
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP-GIIPRV 608
I G V TG V V + +LG+VV+A G P+DG G + + + + P + R
Sbjct: 56 IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG-GVLSSPGKSYPLYREPINPMERA 114
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
EP+ G++ +D+ + +GQR I G + L
Sbjct: 115 PCDEPLNLGVRVIDAFCAMAKGQRVGIFAGSGVGKSTL 152
>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
Eukaryota|Rep: Vacuolar ATP synthase subunit B -
Plasmodium falciparum
Length = 494
Score = 47.2 bits (107), Expect = 4e-04
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Frame = +3
Query: 366 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 542
+G L + + VF G + + V+ +G I+ +P+ +++LGRV + G PID K
Sbjct: 68 QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126
Query: 543 GPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQR 680
GP + + + I I P RV +E +QTGI +D + I RGQ+
Sbjct: 127 GP-NILADDYLDINGNPINPQCRVYPKEMIQTGISTIDVMNSIVRGQK 173
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 46.8 bits (106), Expect = 6e-04
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Frame = +3
Query: 267 ETGRVLSIGDGIARVYGLKNI-QAEEMVEFSSG----LKGMALNLEPDNVGVVVFGNDKL 431
+ GRV +I + + GL + + + VE + L G L L+ D V+
Sbjct: 21 DIGRVSAIQSQLLGIAGLSRVAKLGDRVEIACRDAVILGGEVLRLDGDLANVMPDFPPDR 80
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 611
+ GD V+ + + P ++ +GR+VD G P+DG+ + + P R
Sbjct: 81 VHIGDRVRIADSALIRP-SDRWIGRIVDPFGQPLDGRPLPKGATGSALRADPPSAASRRG 139
Query: 612 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
++TG+ A ++L+PI RGQR + G + L
Sbjct: 140 FGPRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTL 176
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 46.8 bits (106), Expect = 6e-04
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +3
Query: 366 KGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI---- 533
+ + D + + G+ ++ TG + V +G+ +LG VVD+ G +
Sbjct: 48 RAQVIGFRQDAAVLSLLGSAAGCSRESVLVPTGRPLTVRLGDDLLGAVVDSTGRIVGRIA 107
Query: 534 DGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGX 713
D + + + P I R+ +R TG++A+D L+ G GQR I + TG
Sbjct: 108 DARPERAADTWAALEAPPPSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGK 167
Query: 714 TALA 725
T L+
Sbjct: 168 TTLS 171
>UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 80
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +3
Query: 72 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 251
++SAR A R A ++ + + + + ST E+S+ILEERI G +
Sbjct: 1 MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60
Query: 252 KADLEETGRVLSIG 293
+A+L ETGRVLS+G
Sbjct: 61 EANLNETGRVLSVG 74
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +3
Query: 384 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 563
+E +N ++ F + + GD V V +P G +LG+V+ A G ++ +
Sbjct: 62 IEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEDA--ENIP 119
Query: 564 RMRVGIKAPGI--IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
++ + AP I R + + +TGIK++DS++ IG GQ+ I G + L
Sbjct: 120 LQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 174
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +3
Query: 459 TGAIVDVPVGEQILGRVVDALGN---PIDG--KGPIDTKSRMRVGIKAPGIIPRVSVREP 623
TG +P+GE +LG V+D LGN +DG + + + ++A R + E
Sbjct: 82 TGKAFPIPLGEALLGAVLDPLGNICARLDGATETALIATEHRPIDVEALHFSEREPIAEK 141
Query: 624 MQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ T I+A+D L+ G GQR I G T+L
Sbjct: 142 LITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSL 174
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK------GPIDTKSRMRVGIKAPG 593
I+ G ++ G + V + +LG V+D G P+ G GP D ++ + V A
Sbjct: 82 IQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADALP 141
Query: 594 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
R + + TGI+A+DS + +G GQR + G T L + N
Sbjct: 142 PTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARN 191
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +3
Query: 363 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 542
+ G ++ + ++ V+ FG + + G+ V+ V + +G VVDALG P+
Sbjct: 56 IDGEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEHDDMVSPDDSWIGTVVDALGRPLTQY 115
Query: 543 GPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTA 719
R R PG R V E ++T IK +D PI RGQR + G +
Sbjct: 116 TRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKST 175
Query: 720 L 722
+
Sbjct: 176 M 176
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP 590
+K G V G + +P+GE+I GRV + +GN IDG G ++ R+ + P
Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISIHRNPP 124
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 44.0 bits (99), Expect = 0.004
Identities = 35/107 (32%), Positives = 50/107 (46%)
Frame = +3
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
++ IK DI T +VPVG G + D LGN ++ + P D K ++ V
Sbjct: 57 EEQIKINDIAIDTKESFNVPVGSATNGAIFDVLGNLLN-EHPGDFK-KVEVDSTISTEKH 114
Query: 603 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAIDTIIN 743
S E + TGIK +D VPI +G + I G G T + + I N
Sbjct: 115 FNSDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFN 161
>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit B -
Bacteroides thetaiotaomicron
Length = 441
Score = 40.7 bits (91), Expect = 0.037
Identities = 30/108 (27%), Positives = 48/108 (44%)
Frame = +3
Query: 357 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 536
+G + + D+V + VF + I V G + V EQ+ GR +A G+PID
Sbjct: 37 NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96
Query: 537 GKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
G GP + +G + + R E + TGI +D + GQ+
Sbjct: 97 G-GPEIEGQEVEIGGPSVNPVRRKQPSELIATGIAGIDLNNTLVSGQK 143
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 40.3 bits (90), Expect = 0.049
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Frame = +3
Query: 273 GRVLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDI 449
G ++ I + G+ Q EMV L G + D + V+ + +K G+
Sbjct: 5 GSIVRISGPLVVAEGMSGAQMYEMVYVGEDRLIGEITRIRGDRAFIQVYESTSGLKPGEP 64
Query: 450 VKRTGAIVDVPVGEQILGRVVDALGNPI----DGKGPIDTKSRMRV--GIKAPGIIPR 605
V TGA + V +G +LG + D + P+ + +D + RM V GI+AP +PR
Sbjct: 65 VVGTGAPLSVELGPGLLGTIYDGVQRPLPIIAEKVAEVDPRRRMFVERGIQAPP-LPR 121
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 327 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 434
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_A1U7T6 Cluster: Putative uncharacterized protein
precursor; n=1; Marinobacter aquaeolei VT8|Rep: Putative
uncharacterized protein precursor - Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 454
Score = 38.3 bits (85), Expect = 0.20
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = +3
Query: 237 LGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVF 416
+G PKA+L E+G+ +S+ +A + I A E VE + MA L N G VV
Sbjct: 60 IGQIPKAELPESGKAVSLAAWLAHTFRSGTILALEEVE-QRREETMAYWLCIVNDGQVVI 118
Query: 417 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN 527
G D LI++ + V +G +G + +A N
Sbjct: 119 GTDTLIEDWETVVTMAESTLEALGADNVGYIGEAARN 155
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 498 LGRVVDALGNPIDG-KGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRG 674
LGRV++A G ID P + +A I+ + + EP GIK+++ L+ + +G
Sbjct: 96 LGRVLNAHGEAIDDLPSPRGIDTITLRSAEAINILKKKPISEPFDVGIKSINGLLTLAKG 155
Query: 675 QRELIIGDRQTGXTAL 722
QR ++ G + L
Sbjct: 156 QRVGLVAGSGVGKSVL 171
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 38.3 bits (85), Expect = 0.20
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 498 LGRVVDALGNPIDGKGPIDTKSRMRVGIKA--PGIIPRVSVREPMQTGIKAVDSLVPIGR 671
LGR+++A G PIDG GP+ + + +K P R V E + G+++++ R
Sbjct: 98 LGRIINAFGEPIDGLGPL-PQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCR 156
Query: 672 GQRELIIGDRQTGXTAL 722
GQR I G + L
Sbjct: 157 GQRLGIFAGSGVGKSVL 173
>UniRef50_A0GA71 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 277
Score = 37.9 bits (84), Expect = 0.26
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = -2
Query: 737 DRINGQGSXTSLTVTND-QLTLTTANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTG 561
DR GQ S T ND + T+ N+ +N D+S+ LT + G +T ++ DPH
Sbjct: 113 DRCAGQQDNWSNTQVNDNKSTIDLGNYKLDLNKKDSSM-LLTDKKSG-ETTKVWGDPH-- 168
Query: 560 FRVDWSLAINRVTQSIYYTPKDL-LSDGN-VYDSTSTLDNISFLDKLVITKYYHTHIV 393
+D + T +++ P L LSDG + T N+S+ DKL ITK ++V
Sbjct: 169 --ID-----SNGTSNMFNGPLSLNLSDGTKITVGTQGKGNVSYADKLTITKGNDAYLV 219
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 37.9 bits (84), Expect = 0.26
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 378 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 557
L + V + VFG + GD V G ++V G+ +LGR + G PID + +
Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE---EI 100
Query: 558 KSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ I P P R+ RE ++T I +D + + Q+ I AL
Sbjct: 101 CFGEPIPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
>UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar
proton-ATPase A-subunit, partial; n=2; Gallus
gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase
A-subunit, partial - Gallus gallus
Length = 262
Score = 37.5 bits (83), Expect = 0.34
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +3
Query: 255 ADLEET---GRVLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGN 422
AD+EE G V + + + E+V L G + LE D + V+
Sbjct: 10 ADVEEESLLGAVHGVSGPVVTAIRMAGAAMYELVRVGHAELVGEIIRLEGDMATLQVYEE 69
Query: 423 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
++ GD V RTG + V +G ILG + D + P+ + + G+ P +P
Sbjct: 70 TSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPLRDIAQLTGGIYIPRGVNVPA-LP 128
Query: 603 R 605
R
Sbjct: 129 R 129
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
PM ++ +D L PIG+GQR L++ +TG T L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 386
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 345 PSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 253
P PQ SH H+R HH RHD+++L P
Sbjct: 216 PHPQRNAQRSHTHQREHHGHQRHDEAVLGAP 246
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 0.46
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +3
Query: 342 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 506
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
euphratica|Rep: ATP synthase subunit alpha - Populus
euphratica (Euphrates poplar)
Length = 98
Score = 37.1 bits (82), Expect = 0.46
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +3
Query: 429 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 608
+++ GD + R I +PV E LGRV++AL PIDG+ + APGII R
Sbjct: 7 VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR---------LIESPAPGIISRA 54
Query: 609 SVREPMQTGIKAVDSLVPIGRGQRELI 689
S + ++ LV + +E+I
Sbjct: 55 SSVAQVVNALQERKFLVELRTQFQEII 81
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 36.7 bits (81), Expect = 0.60
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIP--RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDR 701
I+G P + R + P I P R+ + P Q ++ VD + PIG+GQR +I+
Sbjct: 348 INGLHPSEAVKRKKFEDLTP-IFPNERIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQP 406
Query: 702 QTGXTAL 722
+TG T L
Sbjct: 407 KTGKTTL 413
>UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Flagellar protein
export ATPase FliI - Hyphomonas neptunium (strain ATCC
15444)
Length = 462
Score = 36.7 bits (81), Expect = 0.60
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Frame = +3
Query: 297 GIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV 473
GIA V L + E ++E + G L++ D+V +++ +I+ GD+V
Sbjct: 24 GIAGVSELAGVGNEIVIEKQGQKIHGEILSVSGDSVTALLYSPSDIIRIGDVV-HIEQEA 82
Query: 474 DVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIPRVSVR--EPMQTGIK 641
+ G+ LG++++ G G T + ++AP + + R + TG
Sbjct: 83 RIEPGDHWLGQIINYRGEVATEMPAGAGLTAKGVSRALRAPALPAHLRHRLGPRLATGWM 142
Query: 642 AVDSLVPIGRGQR 680
D+L+PI RGQR
Sbjct: 143 VTDTLLPICRGQR 155
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 36.7 bits (81), Expect = 0.60
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIP-RVSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQ 704
I+G+ P + K+++ P R+ + EP ++ +D +VP+G GQR LI+ +
Sbjct: 317 INGEDPKEKKNKIPFESLTPDFPEYRMHMETEPTNHSMRVLDLVVPVGAGQRGLIVAPPR 376
Query: 705 TGXTAL 722
TG T L
Sbjct: 377 TGKTVL 382
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 36.7 bits (81), Expect = 0.60
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 363 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 539
LK L + VF + + + GD V++TG ++ V +G +L +V D L NP+ G
Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 36.7 bits (81), Expect = 0.60
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 258 DLEET-GRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKL 431
D E T G V + + + E+V S L G + LE D + V+
Sbjct: 13 DKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSG 72
Query: 432 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 533
+ GD V RTG + V +G I+G + D + P+
Sbjct: 73 VSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPL 106
>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
(Formin homolog overexpressed in spleen 2) (hFHOS2)
(Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
domain-containing protein 3 (Formin homolog
overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
Xenopus tropicalis
Length = 1524
Score = 36.3 bits (80), Expect = 0.80
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 151 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 258
P+WP S PPT+L +SPPSS R S +P+PRL
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRL 417
>UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa
sp. PS|Rep: V-type ATPase subunit A - Beggiatoa sp. PS
Length = 595
Score = 36.3 bits (80), Expect = 0.80
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 264 EETGRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKE 440
E TG ++ I I + L ++ E V L G + L+ + V V+ + + ++
Sbjct: 3 ELTGEIIRINGPIVTIQ-LPGVRNGEQVRVGQLNLMGEVIRLDGEQATVQVYESTESLRP 61
Query: 441 GDIVKRTGAIVDVPVGEQILGRVVDALGNPID 536
G+I + V +G +LG++ D + P+D
Sbjct: 62 GEIAHALRHPLSVELGPGLLGKIFDGVQRPLD 93
>UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:
NEQ263 - Nanoarchaeum equitans
Length = 416
Score = 36.3 bits (80), Expect = 0.80
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Frame = +3
Query: 345 VEFSSGLKGMALNLEPDNVGVVVFGNDKLIK------EGDI--VKRTGAIVDVPVGEQIL 500
VE + + G ++LE V+ +K + G+I + R G + V E +
Sbjct: 11 VELENPMLGEVIDLEETKAIVIAAYENKALALLFDYYTGEIKQINRQGNTYKIAVSEDYI 70
Query: 501 GRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 680
G + + G PI G P R G+ +V E + TGI ++D P+ +GQ+
Sbjct: 71 GGIFNGFGEPIKGPKPYPEDYRDINGLAINPYARKVP-NEILYTGISSIDVAHPLLKGQK 129
>UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'region;
n=114; Bacteria|Rep: Uncharacterized protein in lcrE
5'region - Yersinia enterocolitica
Length = 58
Score = 36.3 bits (80), Expect = 0.80
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 477 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 638
V VGE +LG+V+D LG P DG + + V AP + R + P+ GI
Sbjct: 4 VGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGI 57
>UniRef50_UPI00015B626E Cluster: PREDICTED: similar to
ENSANGP00000011690; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011690 - Nasonia
vitripennis
Length = 1279
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -1
Query: 360 LRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWARLQGSS 229
L+ +PPSP P SS H +HH +RH DQP Q SS
Sbjct: 186 LQTSPPSPSP--SSRRHHHHHHHHNNRHHHRHNDQPVQVQQQSS 227
>UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;
n=3; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 535
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = -1
Query: 414 ILPHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWAR 244
+L H H VPS P +PP QP S H H+ +HHQ RH QS P+ +
Sbjct: 19 LLSHSHASVPSKSP-------SPPILQPAGSHPHAHQHHHHQ--RH-QSFHKPPFCK 65
>UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4210,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 189
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 501 GRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRG 674
GRV + G PID +GP + + I I P R+ E +QTGI A+D + I RG
Sbjct: 3 GRVFNGSGKPID-RGP-SVLAEDYLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARG 60
Query: 675 QR 680
Q+
Sbjct: 61 QK 62
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR---EPMQTGIKAVDSLVPIGRGQRELIIGDR 701
I+G D K R G P + P +R P + + +D ++PIG+GQR LI+
Sbjct: 305 INGGSVEDAKKRPEFGKLTP-LYPNQRLRLETTPDRLTTRVIDLIMPIGKGQRALIVSPP 363
Query: 702 QTGXTALAID 731
+ G T + D
Sbjct: 364 KAGKTTILQD 373
>UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis
glycosyltransferase; n=1; Lactococcus lactis subsp.
cremoris SK11|Rep: Lipopolysaccharide biosynthesis
glycosyltransferase - Lactococcus lactis subsp. cremoris
(strain SK11)
Length = 759
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 414 FGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 593
FGN ++I++ I+ ++ + V + V A +DGK P D K+++ V + P
Sbjct: 274 FGNSEVIEKAKIILNN-PLIGLGVELEREFEKVKANFVDLDGKNPKDLKAKIYVSMHKPS 332
Query: 594 IIPRVSVREPMQTGIKAVDSLVP 662
IP+ P+Q G +P
Sbjct: 333 YIPKNKFLVPIQVGSALATGEIP 355
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQTGI--KAVDSLVPIGRGQRELIIGDR 701
++G+ P D +SR P + P +R E G+ + VD L P+G+GQR LI+
Sbjct: 115 VNGRTP-DRRSRPHFADLTP-LHPHERLRLEHPAAGLAGRVVDLLAPVGKGQRGLIVAPP 172
Query: 702 QTGXTAL 722
+TG T L
Sbjct: 173 KTGKTVL 179
>UniRef50_Q8XIB4 Cluster: Transcription terminator Rho factor; n=4;
Clostridium|Rep: Transcription terminator Rho factor -
Clostridium perfringens
Length = 479
Score = 35.1 bits (77), Expect = 1.8
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Frame = +3
Query: 321 KNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAI--VDVPVGEQ 494
K Q ++M+ S KG+ L+ +N G + N L E DI I + G++
Sbjct: 95 KKEQLKDMISSSDSAKGILEILDNNNFGFLRCRN-YLTSEDDIYVSPSQIRRFGLRTGDE 153
Query: 495 ILGRV-VDALGNP---------IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTG--- 635
+ G+V + G ++G+ P R + P I P+ +R + G
Sbjct: 154 VQGKVRIPKDGEKFKALLYVERVNGESPEKAVGRKKFEELTP-IYPKERLRLETENGRDL 212
Query: 636 -IKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ +D + PIG+GQR +I+ + G T L
Sbjct: 213 SSRLMDIICPIGKGQRGMIVAPPKAGKTTL 242
>UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides
2.4.1|Rep: TraG - Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 1136
Score = 35.1 bits (77), Expect = 1.8
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 1/160 (0%)
Frame = +3
Query: 78 SARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAPKA 257
SA ++G++ + +++ K S + A+ T + G +
Sbjct: 657 SASLSGNLGAKSDERFSEIVKAATSAGIDKDVSTINSARYSASSSDTHGRQTTAGEDRRF 716
Query: 258 DLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK 437
L+E R+ I+R+ K+ E SG + +NL +V G ++
Sbjct: 717 SLDEGERLAE--SYISRLEEAKSYSEAES-RLKSGGTSLDMNLNQMIGNELVRGGHNPLE 773
Query: 438 EGDIVK-RTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 554
D +TGA + G+QI+GRVVD L N + G GP D
Sbjct: 774 VSDFFNPKTGAAMGE--GKQIVGRVVDDLVNGLVGPGPQD 811
>UniRef50_Q2Y0E8 Cluster: VP3; n=1; Aedes pseudoscutellaris
reovirus|Rep: VP3 - Aedes pseudoscutellaris reovirus
Length = 1202
Score = 34.7 bits (76), Expect = 2.4
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +3
Query: 309 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND-KLIKEGDIVKRTGAIVDVPV 485
VY L N+ A M F G + VV GN ++++ GD + + ++D +
Sbjct: 712 VYHLYNVMANMMQNFIPNTDGQFHSFRACAYAVVDSGNIYRVVQNGDELNES-LVIDTAI 770
Query: 486 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 656
+LG +A GN I G + ++++ I P ++ ++T I AV S+
Sbjct: 771 VWGLLGNTDNAYGNAIGATGTANVPTKVQPVIPTPDNFITPTIH--LKTSIDAVCSV 825
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 621 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
P + + +D L PIGRGQR LI+ + G T L
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 856
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 486 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 602
GE ++ + D LGN IDG+ P TKS++R IK+ G+ P
Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVR--IKSLGMTP 171
>UniRef50_Q1YH29 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 168
Score = 34.3 bits (75), Expect = 3.2
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 354 SSGLKGMALNL-EPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNP 530
SSG+ AL L + G ++ EGD++K+ G +VD +G++ G DA G
Sbjct: 31 SSGVAAFALRLVDGQRSGTGAGKGEEAAGEGDVLKQRGLVVD--MGKKAGG---DAEGGQ 85
Query: 531 IDGKGP-IDTKSRMRVGIKAPG 593
DG GP ++T G K G
Sbjct: 86 RDGHGPRLETDQHRDAGQKLEG 107
>UniRef50_A5FDH8 Cluster: YD repeat-containing protein precursor; n=2;
Flavobacterium johnsoniae UW101|Rep: YD repeat-containing
protein precursor - Flavobacterium johnsoniae UW101
Length = 1753
Score = 34.3 bits (75), Expect = 3.2
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Frame = -2
Query: 743 VDDRINGQGSXTSLTVT-NDQLTLTTANWYQ-RVNSLDTSLHRLTHRHPGN---DTWRLN 579
VD + N +G T++ T N Q L + + ++N S +T + GN WR +
Sbjct: 1142 VDYKYNIRGWLTAINQTGNLQADLGLTDLFAFKINYDKPSSSDITSLYNGNISETAWRTS 1201
Query: 578 TD-PHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLD---NISFLDK 429
+D +R ++ +NR+T ++Y P+D + Y+ + D NI FL++
Sbjct: 1202 SDFSLRSYRYEYD-KLNRLTSAVYAKPEDAIPVSGAYNESLMYDKNGNIKFLER 1254
>UniRef50_UPI0001561691 Cluster: PREDICTED: similar to family with
sequence similarity 90, member A1, partial; n=1; Equus
caballus|Rep: PREDICTED: similar to family with sequence
similarity 90, member A1, partial - Equus caballus
Length = 323
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -1
Query: 357 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWARLQGSSLRGWWRSRQLCGWLRH 181
++ PP P+P + + E+ Q + ++L+ + R QG W + C ++RH
Sbjct: 46 QQVPPIPRPSSQAEREREQRQRQDEQRRKALVQRFPRRPQGRQQPSWKEGTESCDYMRH 104
>UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B
CG3421-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to RhoGAP93B CG3421-PA - Apis mellifera
Length = 1054
Score = 33.9 bits (74), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 360 LRRTPPSPQPGCSSSHKHERYHHQCSRH 277
L+ +PPSP P H H +HH ++H
Sbjct: 18 LQTSPPSPSPSSRRHHHHHHHHHHNNKH 45
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 639 KAVDSLVPIGRGQRELIIGDRQTGXTALAID 731
+ VD PIG+GQR LI+ +TG T L D
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537
>UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_71, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 43
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 252 KADLEETGRVLSIGDGIARVYGLKNIQAEEMVE 350
K L+ G VL +GDGIA ++GL + A E+V+
Sbjct: 10 KLRLKIVGTVLQVGDGIACIHGLNEVIASELVK 42
>UniRef50_Q571W8 Cluster: Variant surface glycoprotein Bug 2; n=2;
Trypanosoma brucei|Rep: Variant surface glycoprotein Bug
2 - Trypanosoma brucei brucei
Length = 495
Score = 33.9 bits (74), Expect = 4.2
Identities = 24/137 (17%), Positives = 55/137 (40%)
Frame = +3
Query: 255 ADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 434
A+ +T R+L++ + + SSG+ G E N+G +D++
Sbjct: 5 AETRQTARLLTLQTAVLAALVIPRSADAAAAHSSSGISGFRAICELINLGAASCQDDQVG 64
Query: 435 KEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSV 614
E + +K A++++ + + ++A P + G ++K+ + I
Sbjct: 65 AESNDIKEAAALINLTIANPAIITELEAKATPEEAIGTENSKAAQQCTGDNEWICKAAHS 124
Query: 615 REPMQTGIKAVDSLVPI 665
R + G+K +L +
Sbjct: 125 RLKQKKGLKTKQTLTEL 141
>UniRef50_UPI00015605F2 Cluster: PREDICTED: similar to family with
sequence similarity 90, member A1; n=2; Equus
caballus|Rep: PREDICTED: similar to family with sequence
similarity 90, member A1 - Equus caballus
Length = 552
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -1
Query: 357 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWARLQGSSLRGWWRSRQLCGWLRH 181
++ PP P+P + + E+ Q + ++L+ + R QG W + C ++RH
Sbjct: 86 QQVPPIPRPSSQAEREREQRQRQDEQRRKALVQRFPRRPQGRQQPSWKEGTESCDYVRH 144
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 618 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+P + +D + PIG+GQR LI+ +TG T L
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250
>UniRef50_Q2IXZ1 Cluster: Filamentous haemagglutinin-like protein;
n=1; Rhodopseudomonas palustris HaA2|Rep: Filamentous
haemagglutinin-like protein - Rhodopseudomonas palustris
(strain HaA2)
Length = 4030
Score = 33.5 bits (73), Expect = 5.6
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 231 RILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVV 410
R L P ADL T R + +A L N A + SG +++++P V
Sbjct: 1204 RTLNQRPGADLVLTARAAGLYSSVA----LANEHAAAPITIGSGA---SISVDPGR-SVS 1255
Query: 411 VFGNDKLIKEGDIVKRTGAI 470
+FG+D++ EG+I R G+I
Sbjct: 1256 LFGDDQITIEGEITARGGSI 1275
>UniRef50_Q85X23 Cluster: ORF56b; n=1; Pinus koraiensis|Rep: ORF56b
- Pinus koraiensis (Korean pine)
Length = 56
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 553 SIGPLPSIGLPKASTTRPRICSPTGTSTIAPV 458
S GP S G P+ RPR+ PTGT APV
Sbjct: 4 STGPKLSTGSPRTLKIRPRVAPPTGTLRGAPV 35
>UniRef50_Q19YC3 Cluster: Gp26; n=2; unclassified Siphoviridae|Rep:
Gp26 - Mycobacterium phage PLot
Length = 217
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 584 LNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSD-GNVYDSTSTLDNISFLDKLVI 420
LN+ +G R + +NRVT P+ +L D GN+ + T D+I F DK+ I
Sbjct: 124 LNSLKDSGKRASFFGTVNRVTAHCVLKPRVVLEDDGNLPEGTVFADDIPFADKMHI 179
>UniRef50_Q22MH0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1239
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -2
Query: 671 TANWYQRVNSLDTSLHRLTHRHPGNDTWRLNTDPHTGFRVDWSLAINRVTQSIY-YTPKD 495
T + Y+++N++ + L++ D +LNT + FR+D S +++T+S + +TPK+
Sbjct: 334 TTHLYEKLNTISNQIESLSNSQLKLDLKKLNTQNSSQFRIDSSR--SQITKSEFDHTPKE 391
Query: 494 LLSDGNV--YDSTST 456
+ N+ Y T T
Sbjct: 392 SIQMENLDKYRKTQT 406
>UniRef50_Q5PAF7 Cluster: Elongation factor Ts; n=5;
Anaplasmataceae|Rep: Elongation factor Ts - Anaplasma
marginale (strain St. Maries)
Length = 291
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 285 SIGDGIARVYGLKNIQA-----EEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 449
++G+GI R L ++A E ++EF+ L + +P++V V ND + +E +I
Sbjct: 161 AVGEGIGRAGALVALEATTAKTEALLEFARQLAMHIVAAKPESVSVETLSNDLVEREREI 220
Query: 450 VKRTGAIVDVPVGEQILGRVVD 515
V + + P E + ++VD
Sbjct: 221 VAKQVEALGKP--ESVASKIVD 240
>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024697 - Nasonia
vitripennis
Length = 1018
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 363 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 533
L G + L D+ + V+ + + GD V+RTG + + + +LG + D + P+
Sbjct: 449 LLGEVIRLNGDSATIQVYEDTSGLAVGDPVRRTGRPLSIELAPGLLGSIFDGIQRPL 505
>UniRef50_UPI0000DB768A Cluster: PREDICTED: similar to CG3328-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG3328-PA
- Apis mellifera
Length = 1170
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 372 FP*GLRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWAR 244
FP L+ P P + +H +HHQ H+ S ++Q R
Sbjct: 3 FPWTLQHQPTDPVQNSRNQQQHHHHHHQADHHEDSGINQAGTR 45
>UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18;
Alphaproteobacteria|Rep: Mlr9748 protein - Rhizobium
loti (Mesorhizobium loti)
Length = 149
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -3
Query: 139 FDTWVAALGKRLATEPAIRAEISD 68
+D +V+ALG+RLA PA+R EI D
Sbjct: 115 YDAFVSALGRRLAKGPALRQEIPD 138
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 701
++G +T++R G P + P +R + I + +D ++PIG+GQR LI+
Sbjct: 452 VNGLPAEETRNRPEFGKLTP-LYPNQRLRLETEQKILTTRVIDLIMPIGKGQRALIVSPP 510
Query: 702 QTGXTAL 722
+ G T +
Sbjct: 511 KAGKTTI 517
>UniRef50_A6G840 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 445
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 ADLEETGRVLSIGDGIARVYGLKNIQAEEMV---EFSSGLKGMALNLEPDNVGVVVF 416
AD+ T RVL GD + +YG+ + F +GL M N++P V +V+F
Sbjct: 294 ADILGTPRVLYCGDDMGPIYGVGGFPYTNLACSSNFYTGLIEMENNVDPKTVNLVIF 350
>UniRef50_A3UAG1 Cluster: Putative uncharacterized protein; n=1;
Croceibacter atlanticus HTCC2559|Rep: Putative
uncharacterized protein - Croceibacter atlanticus
HTCC2559
Length = 509
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 584 LNTDPHTGFRVDWSLAINRVTQSI-YYTPKDLLSDGNVYDSTSTLDNISFLDKL 426
+N DP T + W I+ + SI YY +D SD N Y ++ D S ++
Sbjct: 26 INDDPATSGTIAWHQPISSIGSSILYYGTEDFGSDWNSYPNSQEADRTSLAQQM 79
>UniRef50_A7PWU3 Cluster: Chromosome chr19 scaffold_35, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_35, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 126
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 556 VSIGPLPSIGLPKASTTRPRICSPTGTSTIAPV 458
VS GP S G P RPR+ PTGT AP+
Sbjct: 46 VSTGPKLSTGSPSTLKIRPRVAPPTGTLRGAPL 78
>UniRef50_Q0CZ31 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 447
Score = 33.1 bits (72), Expect = 7.4
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Frame = +3
Query: 195 HKAAEISTILEERILGAAPKADLEETG-RVLSIGDGIARVYGLKNIQAEEMVEFSSGLKG 371
H A + + R LGA A G L+ G+G + +I V+ + L G
Sbjct: 233 HTTALLVEGVARRALGALDDAADGAGGLAALARGEGAGHIVAAGDIAGTAGVQHN--LVG 290
Query: 372 MALNLEPDNVGVVVF---GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 542
+ L DN+ + V G D + G ++D+ + + VV+ALG DG
Sbjct: 291 LVLVDALDNIDLAVLRPAGTDGPERRPGAADAAGHVLDI---KHVQAFVVEALGFDTDGL 347
Query: 543 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIG 668
P + RVG+ A + ++ + QTG + +LV +G
Sbjct: 348 SPGAAGGQRRVGVYAH--VDAAALGDVEQTGALGI-ALVGVG 386
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 467 STSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITN 288
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S N + N
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEISSAKELLTNRISRVGN 133
Query: 287 AQDTT 273
TT
Sbjct: 134 WTGTT 138
>UniRef50_UPI0000D99778 Cluster: PREDICTED: hypothetical protein;
n=3; Eutheria|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 394
Score = 32.7 bits (71), Expect = 9.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 351 TPPSPQPGCSSSHKHERYHHQCSRH 277
TPPSP P S H H +HH H
Sbjct: 86 TPPSPSPPPSHHHHHHHHHHHHHHH 110
>UniRef50_Q1J361 Cluster: Putative uncharacterized protein; n=1;
Deinococcus geothermalis DSM 11300|Rep: Putative
uncharacterized protein - Deinococcus geothermalis
(strain DSM 11300)
Length = 467
Score = 32.7 bits (71), Expect = 9.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = -1
Query: 336 QPGCSSSHKHERYHH------QCSRHDQSLLDQPWARLQGSSLRGW 217
QPG + H H R H +CS H S +PW QG++LRG+
Sbjct: 284 QPGHVADHPHARGEHRCPEEARCSPHGPS--PRPWGTRQGAALRGY 327
>UniRef50_A5UZM9 Cluster: Peptidase C60, sortase A and B precursor;
n=2; Roseiflexus|Rep: Peptidase C60, sortase A and B
precursor - Roseiflexus sp. RS-1
Length = 244
Score = 32.7 bits (71), Expect = 9.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -3
Query: 634 PVCIGSRTDTRGMIPGALIPTLIRDFVSIGPLPSIGLPKASTTRPRICSPTGTSTIAP 461
P + S ++ R P AL+PT V+ PLP++ P A+T I + T T+ P
Sbjct: 24 PAQMSSASNMRAASPAALLPTASAPPVAATPLPTLA-PTATTVPTAIPTATPAPTLPP 80
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 32.7 bits (71), Expect = 9.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 639 KAVDSLVPIGRGQRELIIGDRQTGXTAL 722
+ VD L P+G+GQR L++ +TG T L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_A2BND1 Cluster: DNA gyrase/topoisomerase IV, subunit A;
n=5; Prochlorococcus marinus|Rep: DNA
gyrase/topoisomerase IV, subunit A - Prochlorococcus
marinus (strain AS9601)
Length = 813
Score = 32.7 bits (71), Expect = 9.8
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 354 SSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIV-KRTGAIV---DVPV-GEQILGRVVD 515
S+G+ GMA N+ P N+G +V G L+K DI K+ I+ D P GE I R ++
Sbjct: 170 STGIAVGMATNIPPHNLGEIVDGLVTLVKNKDISDKKLFNIIKGPDFPTGGELIYSRAIE 229
Query: 516 ALGNPIDGKGPI 551
L GKG I
Sbjct: 230 ELYQ--TGKGSI 239
>UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 256
Score = 32.7 bits (71), Expect = 9.8
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 360 LRRTPPSPQP-GCSSSHKHERYHHQCSRHDQSL-LDQPWARLQGSSLRGW 217
LR P P+P GC S +HH+C +D+SL L + GS R W
Sbjct: 205 LRVHQPHPEPEGCQDSKLSTGFHHECVENDRSLTLSLADSDHPGSGERFW 254
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 32.7 bits (71), Expect = 9.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 531 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 701
++G P + R P + P+ +R G+ + +D + PIG+GQR LI+
Sbjct: 402 VNGMAPEHGRGRPEFNKLTP-LYPQDRLRLETDPGVLTTRIIDLVAPIGKGQRGLIVAPP 460
Query: 702 QTGXTAL 722
+TG T +
Sbjct: 461 KTGKTMI 467
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,309,772
Number of Sequences: 1657284
Number of extensions: 17731065
Number of successful extensions: 62451
Number of sequences better than 10.0: 190
Number of HSP's better than 10.0 without gapping: 57750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62188
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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