Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k04
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   3.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.8  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.4  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 203 QLQSEPDGSYIIKNTVTELLNNAESNTINFSYK 301
           QLQ +  G+Y+IK+   +     E+NT+   YK
Sbjct: 158 QLQLDTQGAYVIKSEFNQF---PENNTLTGVYK 187


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 203 QLQSEPDGSYIIKNTVTELLNNAESNTINFSYK 301
           QLQ +  G+Y+IK+   +     E+NT+   YK
Sbjct: 158 QLQLDTQGAYVIKSEFNQF---PENNTLTGVYK 187


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/57 (19%), Positives = 28/57 (49%)
 Frame = +2

Query: 107 MSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSYIIKNTVTELLNNAES 277
           + V A+D G  D++L  S +  +    T+    + ++PD   +++  +   L+  ++
Sbjct: 824 LEVFATDGGNGDQQLQGSCLVNNTPVGTEVYRLMATDPDEGAMLRYYIDRSLSEGKT 880


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -3

Query: 271 GIVKQLGN---CVLYDVRTIRFGLKLLASFGCIIV 176
           G++  L N   C +Y V      + LLASFG  IV
Sbjct: 272 GLIFSLANAVACAMYVVGFCESMIDLLASFGVAIV 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,016
Number of Sequences: 2352
Number of extensions: 13114
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)