Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k04
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000209-1|AAH00209.1|  357|Homo sapiens chromosome 1 open readi...    31   4.7  
AL033528-6|CAM12868.1|  357|Homo sapiens chromosome 1 open readi...    31   4.7  
AK223419-1|BAD97139.1|  357|Homo sapiens hypothetical protein MG...    31   4.7  
AK024326-1|BAB14886.1|  357|Homo sapiens protein ( Homo sapiens ...    31   4.7  

>BC000209-1|AAH00209.1|  357|Homo sapiens chromosome 1 open reading
           frame 135 protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 302 LWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDH 481
           L T+GH  + ++ F  E  L+  D  DC   + H  L  + ++DL+ +   D   ++ D 
Sbjct: 137 LQTSGHHRM-KTPFSTELSLLQPDTPDCAG-DSHTPLAFSFTEDLESSCLLDRKEEKGDS 194

Query: 482 KNSWKFMSSWESN 520
              W+++   + N
Sbjct: 195 ARKWEWLHESKKN 207


>AL033528-6|CAM12868.1|  357|Homo sapiens chromosome 1 open reading
           frame 135 protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 302 LWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDH 481
           L T+GH  + ++ F  E  L+  D  DC   + H  L  + ++DL+ +   D   ++ D 
Sbjct: 137 LQTSGHHRM-KTPFSTELSLLQPDTPDCAG-DSHTPLAFSFTEDLESSCLLDRKEEKGDS 194

Query: 482 KNSWKFMSSWESN 520
              W+++   + N
Sbjct: 195 ARKWEWLHESKKN 207


>AK223419-1|BAD97139.1|  357|Homo sapiens hypothetical protein
           MGC2603 variant protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 302 LWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDH 481
           L T+GH  + ++ F  E  L+  D  DC   + H  L  + ++DL+ +   D   ++ D 
Sbjct: 137 LQTSGHHRM-KTPFSTELSLLQPDTPDCAG-DSHTPLAFSFTEDLESSCLLDRKEEKGDS 194

Query: 482 KNSWKFMSSWESN 520
              W+++   + N
Sbjct: 195 ARKWEWLHESKKN 207


>AK024326-1|BAB14886.1|  357|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14264 fis, clone PLACE1002004. ).
          Length = 357

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 302 LWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDH 481
           L T+GH  + ++ F  E  L+  D  DC   + H  L  + ++DL+ +   D   ++ D 
Sbjct: 137 LQTSGHHRM-KTPFSTELSLLQPDTPDCAG-DSHTPLAFSFTEDLESSCLLDRKEEKGDS 194

Query: 482 KNSWKFMSSWESN 520
              W+++   + N
Sbjct: 195 ARKWEWLHESKKN 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,871,678
Number of Sequences: 237096
Number of extensions: 1734795
Number of successful extensions: 3178
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3178
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)