Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10k03
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.60 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 69  MKSYPIYLK*KSWPRNSSAWRTSANPLRCRSPTHDDDGAK 188
           M+++P Y + K   +NS     S N    + P H DD  K
Sbjct: 114 MRNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGK 153


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +2

Query: 302 TVPGGSKEI----PEGTEEVTKESSRPGSPMPEPGTLKNKL 412
           T+ G S EI    P+  EEVT++ S   +P P    L   L
Sbjct: 381 TLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTL 421


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 381 IGLPGLLDSLVTSSVPSGISLEPPGTVI 298
           I  PG L  L + + P G+ L  P T +
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSV 708


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 381 IGLPGLLDSLVTSSVPSGISLEPPGTVI 298
           I  PG L  L + + P G+ L  P T +
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSV 600


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 338 TEEVTKESSRPGSPMPEP 391
           T+E  KE   P +P P P
Sbjct: 240 TDEQLKELENPPTPKPRP 257


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 188 ENILKDTQTKQVYMHSLTARSISKEFRDELKLSMP 292
           E ILK  +  + Y + L  R       +ELK ++P
Sbjct: 34  EEILKSDRLLKNYFNCLMERGTCSPDGEELKKALP 68


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 575  FIDTLWILSLIF*KFEIKYL 516
            F + +WI SLI  K  +K+L
Sbjct: 1168 FTEGIWICSLIHRKKIVKFL 1187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,953
Number of Sequences: 336
Number of extensions: 3576
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)