Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10k03
(707 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P... 34 0.080
At5g45790.1 68418.m05631 expressed protein ; expression support... 31 0.75
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to... 31 0.75
At1g10880.1 68414.m01250 expressed protein contains Pfam profile... 31 0.75
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 31 0.99
At3g55660.1 68416.m06184 expressed protein contains Pfam profile... 31 0.99
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P... 30 1.3
At5g55760.1 68418.m06950 transcriptional regulator Sir2 family p... 29 2.3
At1g13360.1 68414.m01552 expressed protein 29 2.3
At5g04360.1 68418.m00428 pullulanase, putative / starch debranch... 29 3.0
At5g03720.1 68418.m00332 heat shock transcription factor family ... 29 3.0
At5g35460.1 68418.m04217 expressed protein 29 4.0
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 4.0
At5g08240.1 68418.m00967 expressed protein 29 4.0
At4g24410.1 68417.m03500 expressed protein 29 4.0
At5g21940.1 68418.m02547 expressed protein supported by full len... 28 5.3
At1g64570.1 68414.m07319 expressed protein 28 5.3
At5g06910.1 68418.m00781 DNAJ heat shock protein, putative (J6) ... 27 9.2
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 27 9.2
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 27 9.2
At3g11420.1 68416.m01393 fringe-related protein similar to hypot... 27 9.2
At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase fa... 27 9.2
>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
Length = 820
Score = 34.3 bits (75), Expect = 0.080
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +2
Query: 56 IDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHS 235
+D + +L L K EL ++ + + + + + R++ E + + + ++
Sbjct: 380 LDRILTILEDLNKRVELIERILDIRMEEKNNQRSEEDEERKQEDEGVERQPEAEEEGGLE 439
Query: 236 LTARSISKEFRDELKLSMPTPITVPGGSKEIPEGT-EEVTKESSRPGSPMPEPGTLKNKL 412
A + ++ F D ++ + PG + I +E+ +ESS+ SP P TL +
Sbjct: 440 RKAENDNESFEDSIREPNTQYGSYPGDDENIQRDVGDELVEESSKDMSPTPRSSTLNFNI 499
Query: 413 AFFESL 430
ESL
Sbjct: 500 LSEESL 505
>At5g45790.1 68418.m05631 expressed protein ; expression supported
by MPSS
Length = 423
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 185 KENILKDTQTKQVY-MHSLTARSISKEFRDELKLSMPTPITVPGGSKEIPEGTEEVTK 355
+E L +T + +H T I K FR+ELK P P KEI G E K
Sbjct: 231 REKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEISRGLERFEK 288
>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 805
Score = 31.1 bits (67), Expect = 0.75
Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +2
Query: 56 IDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHS 235
+D + +L L K EL +K + + + + + R++ E + + + ++
Sbjct: 348 LDRILTILEDLNKRVELIEKILDIRMEEKNNQRSEEDEERKQEDEGVERQPEAEEEGGLE 407
Query: 236 LTARSISKEFRDELKLSMPTPITVPGGSKEIPEGT-EEVTKESSRPGSPMPEPGTLKNKL 412
A + ++ F D ++ + PG + +E+ +ESS+ SP P T +
Sbjct: 408 RKAENDNESFEDSIREPNTQYGSYPGDDENTQRDVGDELVEESSKDKSPTPRSSTPNFNI 467
Query: 413 AFFESL 430
ESL
Sbjct: 468 LSEESL 473
>At1g10880.1 68414.m01250 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 651
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 17 LDEDTSSQKEPRYIDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSK 187
+DE+T S+K+ + E D+V + P L K S ++L + ++ + ++R K
Sbjct: 535 IDEETYSRKQREFECERDQVFVNAPSKASLWKSLPSTKDLRDQIQAMELKGEQKRKK 591
>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At3g42690
Length = 1200
Score = 30.7 bits (66), Expect = 0.99
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 110 KKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHSLTARSISKEFRDELKLSM 289
KK + +S PV + Q +RR S+ + +DT K +AR + RDE +S
Sbjct: 4 KKSSKSKTISPPVVMKQE-PKRRNSRADAQRDTHAKSPAKSPASARGL----RDESPIS- 57
Query: 290 PTPITVP---GGSKEIPEGTEEVTKESSRPGSPMP 385
P P +P GG + + +E ++S +P
Sbjct: 58 PAPAKIPAKSGGLRNESKQGDERCRDSEFTNPSLP 92
>At3g55660.1 68416.m06184 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 579
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 105 WPRNSSAWRTSANPLRCRSPTH-DDDGAKRI 194
WP +WR S+ ++ ++PT DD G KR+
Sbjct: 71 WPLGQGSWRKSSGKMKKKTPTKIDDFGFKRV 101
>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At2g06430,
At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 836
Score = 30.3 bits (65), Expect = 1.3
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Frame = +2
Query: 56 IDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHS 235
+D + +L L K EL ++ + + + + + R++ E + + + ++
Sbjct: 352 LDRILTILEDLNKRVELIERILDIRMEEKNNQRSEEDEERKQEDEGLERQPEAEEEGGLE 411
Query: 236 LTARSISKEFRDELKLSMPTPITVPGGSKEIPEGTE-----EVTKESSRPGSPMPEPGTL 400
A++ ++ F D ++ P T G E T+ EV +ESS+ SP P T
Sbjct: 412 RKAKNDNESFEDSIR----EPNTQYGSYLGDDENTQRYVGDEVAEESSKDKSPTPRSSTP 467
Query: 401 KNKLAFFESL 430
+ F ESL
Sbjct: 468 NFNILFEESL 477
>At5g55760.1 68418.m06950 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family
Length = 473
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/93 (23%), Positives = 34/93 (36%)
Frame = +2
Query: 86 LPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHSLTARSISKEF 265
LP +K + F N + V QP+ +RR+ N D K Y S
Sbjct: 308 LPFIKSIEVSFSDNHNYKDAVLDKQPFLMKRRTARNETFDIFFKVNYSDGCDCVSTQLSL 367
Query: 266 RDELKLSMPTPITVPGGSKEIPEGTEEVTKESS 364
E K+S + + + E+ +ESS
Sbjct: 368 PFEFKISTEEHVEIIDKEAVLQSLREKAVEESS 400
>At1g13360.1 68414.m01552 expressed protein
Length = 194
Score = 29.5 bits (63), Expect = 2.3
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = +2
Query: 29 TSSQKEPRYIDE-LDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKD 205
T S ++ R DE DE + P+VK L + + S+P V Q +S E+ L
Sbjct: 11 TDSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDEL-S 69
Query: 206 TQTKQVYMHSLTARSISKEFRDELKLS-MPTPITVPGGSKEIPEGTEEVTKES 361
T T S TA + L+ S + P +P EEVT E+
Sbjct: 70 TVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTET 122
>At5g04360.1 68418.m00428 pullulanase, putative / starch debranching
enzyme, putative similar to pullulanase [Spinacia
oleracea] GI:634093 (EC 3.2.1.41); contains Pfam
profiles PF00128: Alpha amylase catalytic domain,
PF02922: Isoamylase N-terminal domain
Length = 965
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 396 VPGSGIGLPGLLDSLVTSSVPSGISLEPPG 307
+ G+G+ LPG+LD L + P G P G
Sbjct: 187 IQGTGLQLPGVLDELFSYDGPLGAHFTPEG 216
>At5g03720.1 68418.m00332 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 412
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 281 LSMPTPITVPGGSKEIPEGTEEVTKESSRPGSPMPEP 391
+S PTPI+VP + G+ V + GSP+P P
Sbjct: 8 VSKPTPISVPVSRRSDIPGSLYVDTDMGFSGSPLPMP 44
>At5g35460.1 68418.m04217 expressed protein
Length = 381
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 375 LPGLLDSLVTSSVPSGIS-LEPPGTVIGVGIDNLSSSRNSFEMLLAVRLCIYTCFVCVSF 199
LPGL+ + P+ + + P GT V + F L V L +YT + + F
Sbjct: 182 LPGLVFFTIRWWNPATFAAMHPVGTDRRVSWPYVEDKAYLFTWLFLVPLVVYTLWQVLYF 241
Query: 198 KIFSLLRRRR 169
I ++LRR+R
Sbjct: 242 LIVNVLRRQR 251
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 290 PTPITVPGGSKEIPEGTEEVTKESSRPGSPMPEPGTLKNKLAFF 421
P+P VP S PEG + P P P + AFF
Sbjct: 77 PSPADVPTASPPAPEGPTVSPSSAPGPSDASPAPSAAFSNKAFF 120
>At5g08240.1 68418.m00967 expressed protein
Length = 258
Score = 28.7 bits (61), Expect = 4.0
Identities = 28/104 (26%), Positives = 46/104 (44%)
Frame = +2
Query: 95 VKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHSLTARSISKEFRDE 274
++E K +E+ ++ + P RR ++NI D + M+ T + K+ RD
Sbjct: 72 IEETEKPTSRVEDETDDKQKPLSVIRRITDRKNIPVDDKA----MNQETKETKPKDLRD- 126
Query: 275 LKLSMPTPITVPGGSKEIPEGTEEVTKESSRPGSPMPEPGTLKN 406
+ PI G KE TE ++ SSR G P +P +N
Sbjct: 127 ITPDRSKPIEPLGSFKE-DTCTERISSISSRYGKPDLKPTRSRN 169
>At4g24410.1 68417.m03500 expressed protein
Length = 169
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 5 PCRDLDED-TSSQKEPRYIDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRR-- 175
P +D S +P Y + +++P++ K++ A+K +++ + + + + +
Sbjct: 12 PLKDFKSSHKSGHAKPNYDTLVLKIIPYITKIRSAAQKLYNLKAHAADLSMINAITTKLI 71
Query: 176 RRSKENILKDTQTKQVYMHS 235
R K NI K TQ K + S
Sbjct: 72 SRIKTNITKTTQQKMCTIKS 91
>At5g21940.1 68418.m02547 expressed protein supported by full length
cDNA GI:22531282 from [Arabidopsis thaliana]
Length = 264
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/93 (23%), Positives = 32/93 (34%)
Frame = +2
Query: 101 ELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYMHSLTARSISKEFRDELK 280
E A S ++ + K PYSRRRR+ K ++ + + R L
Sbjct: 108 EAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKTTPRGGISKKHVMSSSRSALT 167
Query: 281 LSMPTPITVPGGSKEIPEGTEEVTKESSRPGSP 379
L+M V G G + GSP
Sbjct: 168 LAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSP 200
>At1g64570.1 68414.m07319 expressed protein
Length = 1239
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 2 SPCRDLDEDTSSQKEPRYIDELDEV 76
SP RDLD+D ++E Y DE ++V
Sbjct: 20 SPNRDLDKDEEEEEECEYDDEEEDV 44
>At5g06910.1 68418.m00781 DNAJ heat shock protein, putative (J6)
identical to DnaJ homologue [Arabidopsis thaliana]
GI:2689720; contains Pfam profile PF00226 DnaJ domain
Length = 284
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/106 (27%), Positives = 49/106 (46%)
Frame = +2
Query: 50 RYIDELDEVLPHLPKVKELAKKFVSMENLSEPVKVPQPYSRRRRSKENILKDTQTKQVYM 229
R+ D LDE + +VK +K + N K P R+R+ K++ KD++T M
Sbjct: 171 RFKDMLDEAIA-AGEVKS-SKAYEKWANKISETKPPTSPLRKRKKKKSAAKDSETDLCLM 228
Query: 230 HSLTARSISKEFRDELKLSMPTPITVPGGSKEIPEGTEEVTKESSR 367
+ R +E + ++ + I+ GG E E TEE + + R
Sbjct: 229 --IAKR--QEERKGKVDSMFSSLISRYGGDAE-AEPTEEEFEAAQR 269
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +2
Query: 290 PTPITVPGGSKEIPEGTEEVTKESSRPGSPMPEPGT---LKNK-LAFFESLK 433
P+P PG +P + S P P+P PG KN+ L F S+K
Sbjct: 253 PSPSPTPGPDSPLPSPGPDSPLPSPGPDPPLPSPGPHLYEKNRWLIHFPSIK 304
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 284 SMPTPITVPGGSKEIPEGTEEVTKESSRPGSPMPEPGT 397
S P T PGG+ P+ + V+ +S PGS P+ G+
Sbjct: 173 SPPGSTTPPGGAHS-PKSSSAVSPATSPPGSMAPKSGS 209
>At3g11420.1 68416.m01393 fringe-related protein similar to
hypothetical protein GB:AAC23643 [Arabidopsis thaliana]
+ weak similarity to Fringe [Schistocerca
gregaria](GI:6573138);Fringe encodes an extracellular
protein that regulates Notch signalling.
Length = 505
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 134 LSEPVKVPQPYSRRRRSKENILKDT-QTKQVYMHSLTARSISKEFRDELKLSMPTPITVP 310
L EPVK+P+ +S R S + D T+ + S A I++ D +L++P
Sbjct: 128 LDEPVKIPENHSDVRFSIPTRVSDPGWTRFKFSSSRAAVRIARIIWDSYRLNLPNVRWFV 187
Query: 311 GGSKEIPEGTEEVTKESSR 367
G + TE + K S+
Sbjct: 188 MGDDDTVFFTENLVKVLSK 206
>At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P95649 CbbY protein
{Rhodobacter sphaeroides}; contains InterPro accession
IPR005834: Haloacid dehalogenase-like hydrolase
Length = 1055
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 393 PGSGIGLPGLLDSLVTSSVPSGISLEPPGTVIGVGID-NLSSSRNSFEMLLAV 238
P SGIG PG L+ LVT G+ + + + +D NL ++ S M A+
Sbjct: 156 PESGIGFPGALE-LVTECKNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAI 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,947,125
Number of Sequences: 28952
Number of extensions: 310006
Number of successful extensions: 988
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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