Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10j22
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   4.5  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   6.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.0  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   6.0  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   6.0  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          22   6.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   6.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.0  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 535 GPVIWSYFAEFQP 573
           G V+W  F +FQP
Sbjct: 263 GQVLWEGFGDFQP 275


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 535 GPVIWSYFAEFQP 573
           G V+W  F +FQP
Sbjct: 263 GQVLWEGFGDFQP 275


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 468 LQSELRALHVLPLRERCRLGRVGTCDLVVFRG 563
           ++ E   L      ER    R  TCDL+ F+G
Sbjct: 22  VEDEFEPLEHFENEERADRHRRVTCDLLSFKG 53


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -2

Query: 567 EFREIRPNHRSRPAQGGTVHEAEEHEELVILTEG 466
           E  + +P H  R    G V       EL+ +T G
Sbjct: 265 ELIQSKPQHARRKVLAGIVQTKGSDAELICVTTG 298


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 69  TKRPRFQNRRAWRRTFS*EIEIRSGEGLQFGKS 167
           TKRP+   R + +   + E + R   GLQF K+
Sbjct: 92  TKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 468 LQSELRALHVLPLRERCRLGRVGTCDLVVFRG 563
           ++ E   L      ER    R  TCDL+ F+G
Sbjct: 22  VEDEFEPLEHFENEERADRHRRVTCDLLSFKG 53


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 224 WQYAVSSALPRRWTSSRC 277
           W +   S LP + TSSRC
Sbjct: 68  WIHVDISFLPEKSTSSRC 85


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 69  TKRPRFQNRRAWRRTFS*EIEIRSGEGLQFGKS 167
           TKRP+   R + +   + E + R   GLQF K+
Sbjct: 92  TKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 252 RGDGRHLDVV 281
           +GDGRH++V+
Sbjct: 205 KGDGRHMEVI 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,341
Number of Sequences: 438
Number of extensions: 3827
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)