Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10j19
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 229 1e-60
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 227 5e-60
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 221 5e-58
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 215 2e-56
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 209 1e-54
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 193 1e-49
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 153 1e-37
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 96 3e-20
12_01_0915 - 8908643-8908756,8909086-8909203,8909570-8909682,891... 31 0.62
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 30 1.9
08_02_1528 + 27666356-27667081 29 4.4
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 4.4
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 5.8
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 28 5.8
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 5.8
11_06_0284 + 21909758-21913645 28 7.7
06_03_1237 + 28602250-28604196 28 7.7
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.7
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 229 bits (561), Expect = 1e-60
Identities = 116/190 (61%), Positives = 143/190 (75%), Gaps = 4/190 (2%)
Frame = +1
Query: 106 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 279
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 280 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 453
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 454 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 633
PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 634 LNFSVFYYEI 663
LNFSVFYYEI
Sbjct: 400 LNFSVFYYEI 409
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 227 bits (556), Expect = 5e-60
Identities = 114/190 (60%), Positives = 144/190 (75%), Gaps = 4/190 (2%)
Frame = +1
Query: 106 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 279
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 280 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 453
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 454 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 633
PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 634 LNFSVFYYEI 663
LNFSVFYYEI
Sbjct: 182 LNFSVFYYEI 191
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 221 bits (539), Expect = 5e-58
Identities = 112/185 (60%), Positives = 138/185 (74%), Gaps = 4/185 (2%)
Frame = +1
Query: 121 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 294
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 295 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 468
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 469 FYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSV 648
FYLKMKGDY+RYLAE TG R E + AY+ A +I+ A + PTHPIRLGLALNFSV
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSV 180
Query: 649 FYYEI 663
FYYEI
Sbjct: 181 FYYEI 185
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 215 bits (526), Expect = 2e-56
Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Frame = +1
Query: 109 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 282
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 283 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 456
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 457 ESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 636
ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+ A + THPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 637 NFSVFYYEI 663
NFSVFYYEI
Sbjct: 182 NFSVFYYEI 190
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 209 bits (511), Expect = 1e-54
Identities = 107/186 (57%), Positives = 134/186 (72%), Gaps = 7/186 (3%)
Frame = +1
Query: 127 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 291
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 292 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 465
SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 466 VFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFS 645
VFYLKMKGDY+RYLAE TG R + + AYQ A +I+ ++ PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
Query: 646 VFYYEI 663
VFYYEI
Sbjct: 190 VFYYEI 195
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 193 bits (470), Expect = 1e-49
Identities = 95/151 (62%), Positives = 111/151 (73%), Gaps = 2/151 (1%)
Frame = +1
Query: 217 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 390
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 391 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQ 570
IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 571 DAFEISKAKMQPTHPIRLGLALNFSVFYYEI 663
A +I+ A + PTHPIRLGLALNFSVFYYEI
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFSVFYYEI 168
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 153 bits (371), Expect = 1e-37
Identities = 71/149 (47%), Positives = 101/149 (67%)
Frame = +1
Query: 124 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 303
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 304 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 483
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 484 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 570
KGDYYRYLAE +TG + + + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 95.9 bits (228), Expect = 3e-20
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = +1
Query: 184 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 357
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 358 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRH 537
EYR KVE E+ +IC DV+ ++DK KGDYYRYLAE TG +
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 538 SVVEDSQKAYQ 570
V E S AY+
Sbjct: 103 EVSELSLNAYE 113
>12_01_0915 -
8908643-8908756,8909086-8909203,8909570-8909682,
8911138-8911218,8911307-8911357,8912173-8912232,
8913353-8913419,8913509-8913759
Length = 284
Score = 31.5 bits (68), Expect = 0.62
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 367 RVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVV 546
RVK + + EI L KH K +PES+ ++K+ Y E G+ +++
Sbjct: 63 RVKQDANVSEIKKAYYKLSLKHHPDKNPDPESRKLFVKIANAYEILKDESTRGQYDYAIA 122
Query: 547 EDSQKAYQDAFEISKAKMQPTHP--IRLGLALNFSVFYY 657
+ Y A T P + +GL L S F Y
Sbjct: 123 HPEEVFYNTAQYYRAYYGHKTDPRAVLIGLLLIISAFQY 161
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 29.9 bits (64), Expect = 1.9
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Frame = +1
Query: 130 EELVQRAKLAEQAERYDDMAAAMKE--VTETGVELSNEERNLLSVAYKNVVGARRSSWRV 303
+ ++ R A + DDM A MKE + + L E+R L + K + ++
Sbjct: 941 QSMIGRMNRANSIQEIDDMIA-MKEKIIAHESISLKEEKRLLQDI--KELKAQKKQLSSN 997
Query: 304 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK-HLIPKASNPESKVFYLK 480
+ S + E E+K+ + ++ ++ ++K+ + ++ L DK I KA + E
Sbjct: 998 MGSKAEMGEAFEQKEHIHEQQKI-LKKDSDVLLTNLKSLEDKTRFIKKAFDDER------ 1050
Query: 481 MKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 591
D R L E + H V QKAY + FE+ K
Sbjct: 1051 ---DALRKLTE--EHQAAHEV---RQKAYDEWFELKK 1079
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 112 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 291
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 292 SWRVISSIEQKTE-GSERKQQMAKEYRV 372
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +1
Query: 103 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 279
P + D E++ ++ K AE ER + KE ++ SNEE L +KN
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383
Query: 280 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 426
R W V + ++ T K+ AK + + +LR +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +1
Query: 385 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 489
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 28.3 bits (60), Expect = 5.8
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 232 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 408
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 409 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 525
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +1
Query: 121 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 282
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 283 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 375
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +1
Query: 133 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 312
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 313 IEQKTEGSERKQQMAKEYRVKVEKELRE 396
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>06_03_1237 + 28602250-28604196
Length = 648
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 415 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 594
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 595 KMQPTHPIRLGL 630
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 52 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 198
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,178,158
Number of Sequences: 37544
Number of extensions: 372297
Number of successful extensions: 1199
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -