Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10j13
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 45 6e-05
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 40 0.002
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 40 0.002
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 40 0.002
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 40 0.002
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 38 0.007
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 2.6
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 7.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 7.9
AY533306-1|AAS21308.1| 383|Caenorhabditis elegans BRE-4 protein. 28 7.9
AY130767-1|AAM95168.1| 383|Caenorhabditis elegans UDPGalNAc:Glc... 28 7.9
AC025727-7|AAG23384.1| 383|Caenorhabditis elegans Bt (bacillus ... 28 7.9
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 20 GLACCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLT 157
G C +C ++CA+C YC+ HQ DW HK EC T
Sbjct: 142 GPGLCRICGCSAAKKCAKCQVARYCSQAHQVIDWPAHKLECAKAAT 187
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 59 RRCARCLNIYYCNTEHQRQDWKRHKSEC 142
++C+ C + YC+ E QR DWK HK EC
Sbjct: 37 KKCSACRRLAYCSQECQRADWKLHKVEC 64
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 29 CCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSD 178
C + C + C C + YC+ EHQ+ DW HK C T + S+
Sbjct: 42 CGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLTHKMICKSLQTSGMVPSN 91
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 CAVCNQK-TQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQ 163
C+VC ++RC +C + YC+ E Q+ DW HK C T+Q
Sbjct: 321 CSVCGHPGAKKRCTQC-KLAYCSQECQKFDWPIHKKVCSFLKTRQ 364
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +2
Query: 32 CAVC------NQKTQ-RRCARCLNIYYCNTEHQRQDWKR-HKSEC 142
CA C +Q+T+ C CL + YC + QR+DWK H+ EC
Sbjct: 23 CATCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSCHQFEC 67
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 32 CAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSEC 142
C CN + C C N YC+ E Q+ W+ H+ C
Sbjct: 125 CWQCNSEAIYHC--CWNTAYCSVECQQGHWQIHRKFC 159
>AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical
protein F23H11.1 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 32 CAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSEC 142
C C+ + C C N YC+ E Q+ W+ H+ C
Sbjct: 151 CWSCDNEAIYHC--CWNTAYCSVECQQGHWQTHRKFC 185
>Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical
protein T22A3.4b protein.
Length = 507
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 62 RCARCLNIYYCNTEHQRQDWKRHKSEC 142
RC C YC+ E Q W HK EC
Sbjct: 64 RCGGCNFSMYCSKECQATAWLVHKPEC 90
>Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical
protein T22A3.4a protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 62 RCARCLNIYYCNTEHQRQDWKRHKSEC 142
RC C YC+ E Q W HK EC
Sbjct: 64 RCGGCNFSMYCSKECQATAWLVHKPEC 90
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 101 EHQRQDWKRHKSECIPKLTKQLAKSDNFG---ECSTVTKEAAKEIGNIAQNYQHDVTKVC 271
+H++Q + K + ++ + AK D E + +K A KE G + +N+Q + +VC
Sbjct: 213 QHEKQQDEAEKGKEEARINRAAAKVDKRKAALESARASKRARKEQGVVEENHQEN-CEVC 271
Query: 272 N-DGDV 286
N DG++
Sbjct: 272 NQDGEL 277
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 101 EHQRQDWKRHKSECIPKLTKQLAKSDNFG---ECSTVTKEAAKEIGNIAQNYQHDVTKVC 271
+H++Q + K + ++ + AK D E + +K A KE G + +N+Q + +VC
Sbjct: 213 QHEKQQDEAEKGKEEARINRAAAKVDKRKAALESARASKRARKEQGVVEENHQEN-CEVC 271
Query: 272 N-DGDV 286
N DG++
Sbjct: 272 NQDGEL 277
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 101 EHQRQDWKRHKSECIPKLTKQLAKSDNFG---ECSTVTKEAAKEIGNIAQNYQHDVTKVC 271
+H++Q + K + ++ + AK D E + +K A KE G + +N+Q + +VC
Sbjct: 213 QHEKQQDEAEKGKEEARINRAAAKVDKRKAALESARASKRARKEQGVVEENHQEN-CEVC 271
Query: 272 N-DGDV 286
N DG++
Sbjct: 272 NQDGEL 277
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 26 ACCAVCNQKTQ-RRCARCLNIYYCNTEHQRQDWKR--HKSEC 142
AC N K + + C C + YC+ E Q +W H+ EC
Sbjct: 715 ACHECGNSKLKLKACEECYDAVYCSKECQVANWSTGGHREEC 756
>AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical
protein F37B4.10 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 119 WKRHKSECIPKLTKQLAKSDNFGECSTVTKEAAKEI 226
+ R K EC+ K TK++ D+FG V +++ I
Sbjct: 15 YAREKVECLEKFTKRVNTIDSFGTSFLVMSSSSQNI 50
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 560 STATGSNVLRTINSTDTNMPILPEPTARVKEYPEASLKGSVAP 688
+TAT S+ T ++TD++ P P++ P A + +P
Sbjct: 38 TTATSSSATETTSNTDSSSTATPSPSSASSTTPTAQSSTATSP 80
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 65 CARCLNIYYCNTEHQRQDWKRHKSEC 142
C C YYC+ E + +W H C
Sbjct: 1259 CKHCYT-YYCSRECRHNNWPNHSGRC 1283
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 65 CARCLNIYYCNTEHQRQDWKRHKSEC 142
C C YYC+ E + +W H C
Sbjct: 1300 CKHCYT-YYCSRECRHNNWPNHSGRC 1324
>AY533306-1|AAS21308.1| 383|Caenorhabditis elegans BRE-4 protein.
Length = 383
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 125 RHKSECIPKLTKQLAKSDNFGECSTVTKEAAKEIGNIAQNY 247
RH S I K +L S FG S +TK+ K+I + ++
Sbjct: 239 RHMSVAIDKFNYKLPYSAIFGGISALTKDHLKKINGFSNDF 279
>AY130767-1|AAM95168.1| 383|Caenorhabditis elegans
UDPGalNAc:GlcNAc{beta}-R
{beta}1,4-N-acetylgalactosaminyltransferase protein.
Length = 383
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 125 RHKSECIPKLTKQLAKSDNFGECSTVTKEAAKEIGNIAQNY 247
RH S I K +L S FG S +TK+ K+I + ++
Sbjct: 239 RHMSVAIDKFNYKLPYSAIFGGISALTKDHLKKINGFSNDF 279
>AC025727-7|AAG23384.1| 383|Caenorhabditis elegans Bt (bacillus
thuringiensis) toxinresistant protein 4 protein.
Length = 383
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 125 RHKSECIPKLTKQLAKSDNFGECSTVTKEAAKEIGNIAQNY 247
RH S I K +L S FG S +TK+ K+I + ++
Sbjct: 239 RHMSVAIDKFNYKLPYSAIFGGISALTKDHLKKINGFSNDF 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,694,345
Number of Sequences: 27780
Number of extensions: 283313
Number of successful extensions: 954
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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