Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10j08
(446 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74475-1|CAA98960.1| 107|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 36 0.018
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 32 0.22
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 31 0.38
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 31 0.50
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 30 0.67
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 30 0.88
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 30 0.88
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 30 0.88
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 29 1.2
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 2.7
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 2.7
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 28 2.7
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 28 2.7
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 4.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 4.7
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 27 6.2
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 6.2
U53148-6|AAB37075.1| 186|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 27 6.2
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 27 6.2
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 6.2
AF303248-1|AAG50206.1| 186|Caenorhabditis elegans 5I259 protein. 27 6.2
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 27 6.2
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 27 8.2
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 8.2
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 27 8.2
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 8.2
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 27 8.2
AF083230-1|AAD03688.1| 115|Caenorhabditis elegans nuclear recep... 27 8.2
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 8.2
AF067622-5|AAC17544.1| 371|Caenorhabditis elegans Nuclear hormo... 27 8.2
>Z74475-1|CAA98960.1| 107|Caenorhabditis elegans Hypothetical
protein R04F11.2 protein.
Length = 107
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +2
Query: 107 VRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 286
V ISPLI+FGR++ L++GV+YG F ++ + A +RE + ++ V + ++K+ +
Sbjct: 18 VTISPLIRFGRYAALSLGVVYGFFRLRQIREYHADIREWDHEKAVAAAEEAAKKKKWLAK 77
Query: 287 LEIKALEEMAS 319
E++ L ++ +
Sbjct: 78 DEMRYLMQVVN 88
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 35.5 bits (78), Expect = 0.018
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 173 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKER 277
A H+ L KKE ++RE +AKEK + K EKER
Sbjct: 264 AHHKEWLQKKEREIREKKAKEKAAAEQKAATEKER 298
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMAS 319
K+ K RE E++++VIR + +E++ A E+KA+ E A+
Sbjct: 352 KQMKKRREQESEQRVIRRLTIVKEQQDAEEAEVKAIRENAA 392
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.38
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKI 349
KKE + REIE K I++A+ K E+E E++ L+E +K K+ +
Sbjct: 143 KKEQEKREIENK---IKEARKKREQEARRLEEVEKLKEQKKAEKRKMKEAL 190
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 310
+ R+ K++ K E E KE+ R+ K ++E+E +E K EE
Sbjct: 995 EERMKKEQEKQEEKERKEREKREEKERKEREIREIMERKKREE 1037
Score = 28.3 bits (60), Expect = 2.7
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 167 YGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS---ALEIKALEEMASGTAKK* 337
+G F + L +++AK E E +K+ + KLK+EKE+ + +E K EE +K
Sbjct: 949 FGKF-EKALEQRKAKKEEAERLKKL--EEKLKKEKEKQAEKDRIEAKKFEERMKKEQEKQ 1005
Query: 338 KDK 346
++K
Sbjct: 1006 EEK 1008
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMA 316
Q + +++ +LR E K + +L+E+ ER EIK LEE A
Sbjct: 214 QRKRNEELKRLRIAEEKRLLEEQQRLREQMERERLAEIKRLEEAA 258
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 29.9 bits (64), Expect = 0.88
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 206 AKLREIEAKEKVIRDAKLKEEKERASALEIKAL 304
A L+EIE + V+RDAK K+ K + SA I L
Sbjct: 1088 ALLKEIEEQGAVVRDAKSKDPKSQDSADAINKL 1120
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 29.9 bits (64), Expect = 0.88
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 149 LTVGVLYGAFHQNRLSKKE---AKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMA 316
LT+G F + +++E K +E E + K+ K ++EKERA E + +EE A
Sbjct: 460 LTIGYTPNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKERAKREEQRRIEEAA 518
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 29.9 bits (64), Expect = 0.88
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 149 LTVGVLYGAFHQNRLSKKE---AKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMA 316
LT+G F + +++E K +E E + K+ K ++EKERA E + +EE A
Sbjct: 460 LTIGYTPNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKERAKREEQRRIEEAA 518
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKER 277
Q + +++ + E EAK+K D K KEE+ER
Sbjct: 316 QEAIDREKREKEEAEAKQKEEADRKAKEERER 347
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 191 LSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 292
+ K EAKL+EIE ++K +A L E++++ + ++
Sbjct: 621 IEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 654
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 191 LSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 292
+ K EAKL+EIE ++K +A L E++++ + ++
Sbjct: 621 IEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 654
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 334
KK+ K +++E E+ DAK EE+ A L K E+MA+ +K
Sbjct: 50 KKKNKPKKVENTERPEEDAKCVEERRLAKKLRRK--EQMAANRKQK 93
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKER 277
KKE K +E E K+K + K+K+++ER
Sbjct: 149 KKEEKRKEAEEKKKKDEEEKMKKDEER 175
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 185 NRLSKKEAKLREIEAKEKV---IRDAKLKEEKERASALEIKALEEMASGT 325
N +++ A +R I+A +R+A L E+E A + +L +A+GT
Sbjct: 521 NSINRDLADIRFIDAPASAQNGVREATLSPEREERMATSLSSLSNLAAGT 570
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 185 NRLSKKEAKLREIEAKEKV---IRDAKLKEEKERASALEIKALEEMASGT 325
N +++ A +R I+A +R+A L E+E A + +L +A+GT
Sbjct: 521 NSINRDLADIRFIDAPASAQNGVREATLSPEREERMATSLSSLSNLAAGT 570
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 346
+ R ++KE + E K K +D +EEK + + + EE A K+ K+K
Sbjct: 435 EERKARKEKERERAEKKAKKEKDGHREEEKPKKKDKKHETEEERAERKRKEKKEK 489
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +2
Query: 149 LTVGVLYG-AFHQNRLSKKEAKLREIEAK-EKVIRDAK----LKEEKERASALEIKALEE 310
L V V+ G F NR +++ K +E E + EK+I + K +KEE+ER A K +E
Sbjct: 867 LVVLVIGGIVFFWNRRREEKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKE 926
Query: 311 MASGTAKK*KDKI 349
A++ K K+
Sbjct: 927 EERLKAEEEKVKV 939
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 394 KCGKKYRQISLLTYN-YFIFSLLSCSTSHFFQCFY 293
K +KY +SLL YN YF +L + + HF + Y
Sbjct: 13 KINRKYVTLSLLIYNFYFNLALGTINCFHFIKASY 47
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK 298
QN+ S++EAK+ E AK + R A +++ E ++++
Sbjct: 317 QNKKSEQEAKMAEAAAKARQERSAMRRKDDEDDEQVKVR 355
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKE---EKERASALEIKALEEMASGTAKK*KDKIV 352
+ ++KEA+ E EAK++ ++ + K+ E+ER + K ++ A+K K+K V
Sbjct: 96 KAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAV 153
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAK-LKEEKERASALEIKALEEMASGTAKK*KDKI 349
S E R +E K ++ A+ LKEE ++ A K EEM + + + D +
Sbjct: 246 SDTETSGRTLEGKRSGLQSARDLKEESDKLRAKNSKMFEEMDTSVSGRFADTV 298
>U53148-6|AAB37075.1| 186|Caenorhabditis elegans Hypothetical
protein C26F1.3 protein.
Length = 186
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVIS 358
R+ KK+ ++ ++A + +D K KE+ + + +K + G KK KDK V S
Sbjct: 109 RIDKKKGRIL-VQAHMQTKQDLK-SLRKEKKAIIGVKEPRRLLPGQKKKQKDKSVFS 163
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +2
Query: 200 KEAKLREIEAKEKVIR-DAKLKEEKERASA 286
+E + RE E KEK+ + +AK++E++ER+ A
Sbjct: 923 EEQRKREAEDKEKIEQLNAKVREKEERSEA 952
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKE-----EKERASALEIKALEEMASGTAKK 334
KKEA RE+E + K R K+ + EKER E A + A A K
Sbjct: 1081 KKEALQRELEERNKAERQKKMDDEERHREKERQKKAERDARLQFAKENAAK 1131
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKE-----EKERASALEIKALEEMASGTAKK 334
KKEA RE+E + K R K+ + EKER E A + A A K
Sbjct: 1081 KKEALQRELEERNKAERQKKMDDEERHREKERQKKAERDARLQFAKENAAK 1131
>AF303248-1|AAG50206.1| 186|Caenorhabditis elegans 5I259 protein.
Length = 186
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVIS 358
R+ KK+ ++ ++A + +D K KE+ + + +K + G KK KDK V S
Sbjct: 109 RIDKKKGRIL-VQAHMQTKQDLK-SLRKEKKAIIGVKEPRRLLPGQKKKQKDKSVFS 163
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/94 (22%), Positives = 42/94 (44%)
Frame = +2
Query: 62 QQFYNKMSDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKV 241
+ F K SD+P G + PL+K S + A + +K+ K ++ +AK +
Sbjct: 339 EAFRPKTSDVPGGDQYVVKPLLKLSWGSVVAASDFPTADEVETVEEKDLKKKQ-DAKNQE 397
Query: 242 IRDAKLKEEKERASALEIKALEEMASGTAKK*KD 343
K + K+++ + + +M +K+ KD
Sbjct: 398 SDKRKNSDRKKKSERKKKGSKGDMILEKSKETKD 431
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 218 EIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKI 349
EI K++ ++KEEKE+ +++ + EE + + K+K+
Sbjct: 453 EIFKVPKLVEKTEVKEEKEKEDSIKDEVAEENSDNDNDEEKEKV 496
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKER 277
SKK + +E K KV+ + K +EE++R
Sbjct: 853 SKKNEEFEALEKKFKVLEEEKTQEERKR 880
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +2
Query: 104 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 283
P + P W +L V + A + + K+ ++ A + + E ERA+
Sbjct: 228 PKCVEPERNKTHWDYLLEEVKWMAVDFRTETNTKRKIAKVIAHAIAKQHRDKQIEIERAA 287
Query: 284 ALEIKALEEMASGTAKK*KD 343
EIK +M +G AK +D
Sbjct: 288 EREIKEKRKMCAGIAKMVRD 307
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 26.6 bits (56), Expect = 8.2
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 149 LTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAK----LKEEKERASALEIKALEEMA 316
L +G + +++ R K++ K E E EK+I + + +KEE+ER A K +E
Sbjct: 845 LVIGGIVFIWYRKREEKRKEKEAE-EENEKLIAERERMRAIKEEEERVKAEREKVKKEEE 903
Query: 317 SGTAKK*KDKI 349
A++ K K+
Sbjct: 904 RLKAEEEKVKV 914
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +2
Query: 104 PVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 283
P + P W +L V + A + + K+ ++ A + + E ERA+
Sbjct: 228 PKCVEPERNKTHWDYLLEEVKWMAVDFRTETNTKRKIAKVIAHAIAKQHRDKQIEIERAA 287
Query: 284 ALEIKALEEMASGTAKK*KD 343
EIK +M +G AK +D
Sbjct: 288 EREIKEKRKMCAGIAKMVRD 307
>AF083230-1|AAD03688.1| 115|Caenorhabditis elegans nuclear receptor
NHR-15 protein.
Length = 115
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 89 NLTFCYKIAVL*NNYCTILFGKIQ 18
NL FCY VL N C + F +++
Sbjct: 38 NLAFCYNYGVLSCNACKMFFRRVE 61
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 212 LREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGT 325
L +I A+ V R+A L E+E A + +L +A+GT
Sbjct: 527 LADIRAQNGV-REATLSPEREERMATSLSSLSNLAAGT 563
>AF067622-5|AAC17544.1| 371|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 15 protein.
Length = 371
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 89 NLTFCYKIAVL*NNYCTILFGKIQ 18
NL FCY VL N C + F +++
Sbjct: 38 NLAFCYNYGVLSCNACKMFFRRVE 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,479,739
Number of Sequences: 27780
Number of extensions: 168387
Number of successful extensions: 804
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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