Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10j08
(446 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65540.1 68414.m07435 calcium-binding EF hand family protein ... 34 0.038
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 33 0.067
At3g05110.1 68416.m00555 hypothetical protein 32 0.15
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 31 0.35
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 30 0.82
At2g22795.1 68415.m02704 expressed protein 29 1.9
At2g04495.1 68415.m00454 expressed protein 29 1.9
At5g13340.1 68418.m01535 expressed protein 28 2.5
At4g27980.1 68417.m04014 expressed protein 28 2.5
At3g51910.1 68416.m05694 heat shock transcription factor family ... 28 2.5
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 28 2.5
At5g37475.1 68418.m04510 translation initiation factor-related s... 28 3.3
At4g05110.1 68417.m00759 equilibrative nucleoside transporter, p... 28 3.3
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 28 3.3
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 28 3.3
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 27 4.4
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 27 4.4
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 27 4.4
At5g53400.1 68418.m06635 nuclear movement family protein contain... 27 5.8
At4g26630.1 68417.m03837 expressed protein 27 5.8
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 27 5.8
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 27 5.8
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 5.8
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 27 7.6
At5g45510.1 68418.m05590 leucine-rich repeat family protein cont... 27 7.6
At3g31320.1 68416.m03987 hypothetical protein 27 7.6
At3g20260.1 68416.m02566 expressed protein 27 7.6
At2g21800.1 68415.m02591 expressed protein 27 7.6
At1g66960.1 68414.m07614 lupeol synthase, putative / 2,3-oxidosq... 27 7.6
>At1g65540.1 68414.m07435 calcium-binding EF hand family protein
similar to leucine zipper-EF-hand containing
transmembrane protein 1 [Homo sapiens] GI:4235226;
contains Pfam profile PF00036: EF hand
Length = 736
Score = 34.3 bits (75), Expect = 0.038
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Frame = +2
Query: 152 TVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEE------KERASALEIKALEEM 313
TVGV ++ +S+++ KL +E +E++I++ + +EE KE AS+ + AL+EM
Sbjct: 479 TVGVT-ALSSEDSVSERKRKLEYLEMQEELIKEEEEEEEEEMAKMKESASSQKDVALDEM 537
Query: 314 ASGTAK 331
+ TAK
Sbjct: 538 MASTAK 543
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 33.5 bits (73), Expect = 0.067
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 310
+KEA L IEAKEK R+ + KEE+ER + +K +EE
Sbjct: 133 EKEASL--IEAKEKEEREQQEKEERERIAEENLKRVEE 168
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 32.3 bits (70), Expect = 0.15
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 188 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK 298
+L +E +LRE+EAK K D K KE +E+ LE+K
Sbjct: 68 QLEARENELREVEAKRKFF-DLKEKELEEKEKELELK 103
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 31.1 bits (67), Expect = 0.35
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 170 GAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKE--RASALEIKALEEMASGTAK 331
G F++ + K++AKLRE + +K ++ KLK +E S E+KA +S K
Sbjct: 659 GKFYEKYMKKRDAKLREEWSLKKGEKETKLKSMQEALEQSRTEMKAKLSASSSERK 714
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 182 QNRLSKKEAKLREIEAKEKVIRDAKLK-EEKERASALEIKALEEM 313
Q R+ +EAK +EIEA + V+ D KL+ + + + EI L+ +
Sbjct: 909 QMRMEIEEAKSQEIEALQSVLTDIKLQLRDTQETKSKEISDLQSV 953
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 310
S++E +E EAKEKV ++ K E + +E LEE
Sbjct: 462 SQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEE 500
>At2g04495.1 68415.m00454 expressed protein
Length = 202
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 155 VGVLYGAFHQNRLSKKEAKLREI--EAKEKVIRDAKLKEEKERASALEIKALEE 310
VG + G+FH N S + K I + KE I+D K + K+ + LE K++ +
Sbjct: 66 VGFILGSFHGNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSK 119
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASAL-EIKALEEMA 316
K+E + R EA EK+ D +++ +KE+ +AL E + EE A
Sbjct: 118 KEEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQA 158
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 191 LSKKEAKLREIEAKEKVIRDAKLKEE-KERASALEIKALE 307
L KKE +LR +E KEK I L+E R S LE K +E
Sbjct: 48 LEKKEERLRVVEMKEKEI--GLLEESISRRLSVLEEKEIE 85
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 176 FHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKI 349
FH + ++ E + E EA+EK D + EE + E+K EE K+ +K+
Sbjct: 161 FHLKQRAETERRNEESEAREK---DLRALEEAVKEKTAELKRKEETLELKMKEEAEKL 215
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 143 SFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASG 322
SFL + +F L +++ K++E+E E AK K S LE+ ALE G
Sbjct: 180 SFLARAMQSPSFLHQLLKQRDKKIKELEDNE----SAKRKRGSSSMSELEVLALEMQGHG 235
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 307
S+K+ L E+E +EK+ ++KEE++R L+ A E
Sbjct: 755 SQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAE 792
>At5g37475.1 68418.m04510 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 225
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 122 LIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 283
L+ F + SF +G+L + + K A ++++ + I + KLK EKE A+
Sbjct: 139 LVPFEK-SFHYIGLLKAVMRLSVANMKAADVKDVASSITAIANEKLKAEKEAAA 191
>At4g05110.1 68417.m00759 equilibrative nucleoside transporter,
putative (ENT6) identical to putative equilibrative
nucleoside transporter ENT6 [Arabidopsis thaliana]
GI:16518997; contains similarity to SWISS-PROT:O54699
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type)
[Rattus norvegicus]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 418
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +2
Query: 17 IGFFQKVSYNNCFTVQQFYNKMSDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLS 196
+GF +S+N+ T +Y K+ P P R+ L+ + ++F + +L A+H+++ S
Sbjct: 26 LGFGSLISWNSMLTTADYYYKV--FPDYHPSRVLTLV-YQPFAFGAIVIL--AYHESKTS 80
Query: 197 KKEAKL 214
++ L
Sbjct: 81 TRKRNL 86
>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 332
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 158 GVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 286
GV A ++ K K RE AKE+ R+ ++KEE+ +
Sbjct: 121 GVSVTAQQEHSKPSKSVKRREKRAKEEADREQRIKEEQSHVKS 163
>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 316
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 158 GVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 286
GV A ++ K K RE AKE+ R+ ++KEE+ +
Sbjct: 105 GVSVTAQQEHSKPSKSVKRREKRAKEEADREQRIKEEQSHVKS 147
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKERASA 286
K AK +I+A++K+I + K+K EK+++ +
Sbjct: 714 KLNAKEHQIQAQDKIIANLKMKLEKKQSKS 743
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKE 274
K E + R +EA+EK ++ K+KE++E
Sbjct: 683 KAENERRAVEAREKAEQERKMKEQQE 708
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 307
S+K+ L E+E +EK++ ++KEE++R + A E
Sbjct: 873 SQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAE 910
>At5g53400.1 68418.m06635 nuclear movement family protein contains
Pfam profile: PF03593 nuclear movement protein
Length = 304
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 227 AKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 334
AKEK+ + K K EKE +E KA +E+ KK
Sbjct: 64 AKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKK 99
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 197 KKEAKLREIEAKEKVIRDAKLKEEKE 274
K+E K +E+EA + + ++K+++EKE
Sbjct: 220 KEENKTKEVEAAKAEVDESKVEDEKE 245
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKERAS 283
S+ + +L+E+E +E V++ +L KER S
Sbjct: 224 SELKLRLKEVETRESVLQQERLSFTKERES 253
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLKEEKERAS 283
S+ + +L+E+E +E V++ +L KER S
Sbjct: 237 SELKLRLKEVETRESVLQQERLSFTKERES 266
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 263 EEKERASALEIKALEEMASGTAKK*KDKIVIS 358
E++ R SALE + LEE+ +A + ++K+ IS
Sbjct: 103 EDRIRISALEAEKLEELQKQSASELEEKLKIS 134
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 194 SKKEAKLREIEAKEKVIRDAKLK-----EEKERASALEIKALEEMASGTAK 331
+K + ++E E+ + D++L +E E A A E KALE++ S + K
Sbjct: 411 NKAKELMKEAESAHLALEDSELHLRVALDEAEEAKAAETKALEQIKSMSEK 461
>At5g45510.1 68418.m05590 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 1222
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 221 IEAKEKVIRDAKL-KEEKERASALEIKALEEMASGTAKK*KD 343
+E KE V++ + K++KE+ +A +++A +++ AKK KD
Sbjct: 150 LEKKEAVVKKLEDDKKKKEKEAAEKLEAEKKLVDPAAKKAKD 191
>At3g31320.1 68416.m03987 hypothetical protein
Length = 327
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 179 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 286
H + + LRE+ AK+K ++ L EEK A A
Sbjct: 241 HFVEMQSTKVTLREVSAKKKEDKERHLAEEKRLAEA 276
>At3g20260.1 68416.m02566 expressed protein
Length = 437
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 121 SNQVWTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAE 261
+N+V + RR+S L PE+ +E E+ D +G +C +E
Sbjct: 59 TNEVKRRLKELRRNSFMVLIPEEEEEEEEESYLDEDDDDGEDKCSSE 105
>At2g21800.1 68415.m02591 expressed protein
Length = 475
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 173 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 307
A + +L K++ KL++ +K + KL+ EK++ + + KAL+
Sbjct: 199 AAEEKKLQKEQEKLQKAASKAEDAEHKKLEREKQKWAKEKDKALK 243
>At1g66960.1 68414.m07614 lupeol synthase, putative /
2,3-oxidosqualene-triterpenoid cyclase, putative similar
to lupeol synthase GI:1762150 from [Arabidopsis
thaliana], 2,3-oxidosqualene-triterpenoid cyclase
[Arabidopsis thaliana] GI:2738027
Length = 763
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 89 LPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLRE 220
LPY P+ + + R +++ + LYG +++ +LRE
Sbjct: 246 LPYFLPIHLGKAFSYTRITYMPISYLYGKKFVGQITPLIMQLRE 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,680,497
Number of Sequences: 28952
Number of extensions: 148981
Number of successful extensions: 596
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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