Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10j03
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022716-1|CAA18770.1| 371|Caenorhabditis elegans Hypothetical ... 163 1e-40
AL022716-2|CAA18772.1| 373|Caenorhabditis elegans Hypothetical ... 159 1e-39
U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeas... 40 0.002
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 38 0.006
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 38 0.006
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 29 3.5
U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical p... 28 6.0
AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical ... 28 6.0
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 28 8.0
U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical pr... 28 8.0
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 28 8.0
>AL022716-1|CAA18770.1| 371|Caenorhabditis elegans Hypothetical
protein C24F3.1a protein.
Length = 371
Score = 163 bits (396), Expect = 1e-40
Identities = 88/200 (44%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Frame = +3
Query: 108 VKPAIGRKTNKNP--PIFSHEFVIQNHADIVSCVVMVFLVGLMVQSTSPIASLFISLHHN 281
VKP G K +K P PI SHEF+IQNH DI+SCVVMVF+VGLM T ++SLFI+ +N
Sbjct: 2 VKPQGGSKASKKPQPPILSHEFIIQNHGDIMSCVVMVFIVGLMFPLTHSLSSLFIAPQYN 61
Query: 282 VSGVEPTREAPKGEPFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSR 461
+ + + E Y SG D A+FFYS+ IV+HA++QEY LDKISKK HLSK
Sbjct: 62 GTYTVAVEQGQEREVHGYLSGILDLPAIFFYSVCWIVVHAVVQEYGLDKISKKTHLSKVS 121
Query: 462 LSALNESGQLIVFHLVTLVWGGDAILREGFIFN-ISQLWEGYPV--HPMSFLLKLWWVVQ 632
ES + F + ++ + F+ + +W GYP MS KL+++ Q
Sbjct: 122 TFKFGESFHQMFFTVYSIAHAFYIVSERLEDFSEVKSVWLGYPTEHRVMSAAYKLYFIFQ 181
Query: 633 ASYWLHTIPELYFQRIKKDE 692
SYW+H PE Y Q++K+DE
Sbjct: 182 ISYWIHQFPEFYLQKLKRDE 201
>AL022716-2|CAA18772.1| 373|Caenorhabditis elegans Hypothetical
protein C24F3.1b protein.
Length = 373
Score = 159 bits (387), Expect = 1e-39
Identities = 88/202 (43%), Positives = 118/202 (58%), Gaps = 7/202 (3%)
Frame = +3
Query: 108 VKPAIGRKTNKNP--PIFSHEFVIQNHADIVSCVVMVFLVGLMVQSTSPIASLFISLHHN 281
VKP G K +K P PI SHEF+IQNH DI+SCVVMVF+VGLM T ++SLFI+ +N
Sbjct: 2 VKPQGGSKASKKPQPPILSHEFIIQNHGDIMSCVVMVFIVGLMFPLTHSLSSLFIAPQYN 61
Query: 282 VSGVEPTREAPKGEPFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSR 461
+ + + E Y SG D A+FFYS+ IV+HA++QEY LDKISKK HLSK
Sbjct: 62 GTYTVAVEQGQEREVHGYLSGILDLPAIFFYSVCWIVVHAVVQEYGLDKISKKTHLSKVS 121
Query: 462 LSALNESGQLIVFHLVTLVWGGDAI---LREGFIFNISQLWEGYPV--HPMSFLLKLWWV 626
ES + F + ++ + L + +W GYP MS KL+++
Sbjct: 122 TFKFGESFHQMFFTVYSIAHAFYIVSERLEDFSEVKSFSVWLGYPTEHRVMSAAYKLYFI 181
Query: 627 VQASYWLHTIPELYFQRIKKDE 692
Q SYW+H PE Y Q++K+DE
Sbjct: 182 FQISYWIHQFPEFYLQKLKRDE 203
>U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 2 protein.
Length = 329
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/81 (17%), Positives = 42/81 (51%)
Frame = +3
Query: 453 KSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVVQ 632
+ + S + E +++ ++ V G +L E +++I++ W +P HP+ + ++ +Q
Sbjct: 82 EKKYSRMAECAMRALYYTISFVCGLYLVLHESHLYDITECWRNWPFHPIPNAVAWYYWIQ 141
Query: 633 ASYWLHTIPELYFQRIKKDEW 695
+++ + + F K+ ++
Sbjct: 142 GGFYIALVFGILFLDAKRSDF 162
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/97 (18%), Positives = 42/97 (43%)
Frame = +3
Query: 450 SKSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVV 629
S SR + E ++ ++G + +++++ Q W GYP HP+ + ++++
Sbjct: 85 SVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMI 144
Query: 630 QASYWLHTIPELYFQRIKKDEWAGRIRNAATAFWFCS 740
+ ++ + F + D W + + T F S
Sbjct: 145 ETGFYYSLLIGSTFDVRRSDFWQLMVHHVITIFLLSS 181
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/97 (18%), Positives = 42/97 (43%)
Frame = +3
Query: 450 SKSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVV 629
S SR + E ++ ++G + +++++ Q W GYP HP+ + ++++
Sbjct: 85 SVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVPDTIWWYYMI 144
Query: 630 QASYWLHTIPELYFQRIKKDEWAGRIRNAATAFWFCS 740
+ ++ + F + D W + + T F S
Sbjct: 145 ETGFYYSLLIGSTFDVRRSDFWQLMVHHVITIFLLSS 181
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 578 FPKLRDVENETFPEYSITTPYQSYEMEYYKLSRFIE 471
FP+L D+E+ F E SI YQ+ E L+ F E
Sbjct: 1693 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1728
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 578 FPKLRDVENETFPEYSITTPYQSYEMEYYKLSRFIE 471
FP+L D+E+ F E SI YQ+ E L+ F E
Sbjct: 1690 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1725
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 578 FPKLRDVENETFPEYSITTPYQSYEMEYYKLSRFIE 471
FP+L D+E+ F E SI YQ+ E L+ F E
Sbjct: 1693 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1728
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 578 FPKLRDVENETFPEYSITTPYQSYEMEYYKLSRFIE 471
FP+L D+E+ F E SI YQ+ E L+ F E
Sbjct: 1690 FPELPDIEDSMFEEESIRWEYQAREAAIQTLNAFCE 1725
>Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical
protein F22B5.4 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 555 FNISQLWEGYPVHPMSFLLKLWWVV--QASYWLHTIPELYFQR 677
F + +L Y V+P+ L W+V+ ASYW E++ R
Sbjct: 68 FLVRRLGHAYEVYPLFVLTAAWFVLFCSASYWSFGKAEIWLDR 110
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 255 SLFISLHHNVSGVEPTREAPKGEPFTYES 341
S FI LHH + ++ + + P PFT++S
Sbjct: 183 SPFIVLHHGGTAIQTSSQPPAFSPFTFQS 211
>U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical
protein C30B5.5 protein.
Length = 790
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 CIVMHAILQEYFLDKISKKFHLSKSR-LSALNESGQL 491
C+V+ IL YFL K S+K H K + L ES L
Sbjct: 738 CVVIAWILSCYFLKKHSQKLHQKKQKALEGFYESNNL 774
>Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical
protein F39B2.8 protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Frame = +3
Query: 369 FYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFHLVTLV------WGGD 530
FY + + ++ LQEY ++ K H+S L ++ + L+ WG
Sbjct: 288 FYGSIVLKIYRNLQEY---RVRKAQHVSVREQDMLKYLAAMLALTITGLMAWTVGSWGDT 344
Query: 531 AILREGFIFNISQ----LWEGYPVHPMSFLLKLWWVVQASYWL 647
A+ R + + Q +W GY + + + ++L + + S WL
Sbjct: 345 ALWRTAWPQCLMQGWHVIWHGYELLFLLYAVRLCYKARNSDWL 387
>AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical
protein T23C6.5 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 363 VFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQL 491
+FF + V ++A L F I + FHL K R S + +S ++
Sbjct: 301 LFFNAAVDPFLYAFLSTRFRQSIKETFHLGKVRESNIEQSSRV 343
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 218 GWIDGTVYKSHCKLVHQFTS--QCQWSGTNERSAERRTFYL--*IWVERCLCRVFLFTCL 385
GW G + +HC++V S QC+W ++ +RT + ++V + LC + F +
Sbjct: 34 GWQTGVL--NHCRVVTMAQSNLQCEWDCPCVGASSKRTSAIIEGLFVIQVLCLIAAFFLV 91
Query: 386 YCDACYSSGV 415
+ A G+
Sbjct: 92 FASAAMIYGI 101
>U28739-9|AAB93451.1| 480|Caenorhabditis elegans Hypothetical
protein C17G10.1 protein.
Length = 480
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 347 PPRFISKRFAFRRFSRWFHSTDIVM*TDEQACNGTC 240
P F ++F ++ W + V T++ CNG+C
Sbjct: 110 PAVFSFRQFLYKEVKEWLQNVSGVELTEQVDCNGSC 145
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 588 VHPMSFLLKLWWVVQASYWLHTIPELY---FQRIKKDEWAGRIRNAATAFW 731
V ++ L + W +QA+ ++ IPE Y F +K E + +AT FW
Sbjct: 157 VQHLTELAEHWKYIQATPYIINIPEKYATRFPTLKNVEAKQSLPRSATQFW 207
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 588 VHPMSFLLKLWWVVQASYWLHTIPELY---FQRIKKDEWAGRIRNAATAFW 731
V ++ L + W +QA+ ++ IPE Y F +K E + +AT FW
Sbjct: 132 VQHLTELAEHWKYIQATPYIINIPEKYATRFPTLKNVEAKQSLPRSATQFW 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,929,716
Number of Sequences: 27780
Number of extensions: 436822
Number of successful extensions: 1005
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -