Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i23
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 308 3e-84
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 307 7e-84
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 300 8e-82
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 299 1e-81
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 280 9e-76
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 254 5e-68
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 165 4e-41
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 142 2e-34
06_03_0384 + 20174441-20175788,20176215-20176858 32 0.52
05_01_0213 - 1606383-1606816,1607695-1608355 31 0.90
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420... 31 0.90
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 31 1.2
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 31 1.2
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 29 2.8
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644... 29 2.8
08_02_0839 + 21693348-21694853 29 4.8
09_04_0292 - 16436918-16439233 28 6.4
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 28 6.4
07_03_0840 + 21935504-21936424,21936516-21938177 28 6.4
07_03_0839 + 21916842-21917852,21917944-21919602 28 6.4
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 28 6.4
12_02_0046 + 12830974-12832386 28 8.4
12_01_0599 - 4892146-4893552 28 8.4
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 28 8.4
07_01_1093 + 10033403-10033984 28 8.4
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 28 8.4
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 28 8.4
05_05_0149 - 22733703-22736216 28 8.4
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 8.4
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 308 bits (756), Expect = 3e-84
Identities = 149/199 (74%), Positives = 169/199 (84%)
Frame = +1
Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 294
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285
Query: 295 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 474
RIISSIEQKEE++G ED+ +I+ YR ++E EL IC IL +LD +L+PSS ESKVF
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345
Query: 475 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 654
Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ ELPPTHPIRLGLALNFSVF
Sbjct: 346 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 405
Query: 655 YYEILNSPDRACRLAKAAF 711
YYEILNSPDRAC LAK AF
Sbjct: 406 YYEILNSPDRACNLAKQAF 424
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 307 bits (753), Expect = 7e-84
Identities = 148/199 (74%), Positives = 170/199 (85%)
Frame = +1
Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 294
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 9 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67
Query: 295 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 474
RIISSIEQKEE++G ED++ +I+ YR ++E EL IC IL +L+ +L+PSS ESKVF
Sbjct: 68 RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127
Query: 475 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 654
Y KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA DIA+ ELPPTHPIRLGLALNFSVF
Sbjct: 128 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVF 187
Query: 655 YYEILNSPDRACRLAKAAF 711
YYEILNSPDRAC LAK AF
Sbjct: 188 YYEILNSPDRACNLAKQAF 206
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 300 bits (736), Expect = 8e-82
Identities = 145/199 (72%), Positives = 167/199 (83%)
Frame = +1
Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 294
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 3 REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 295 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 474
RI+SSIEQKEE +G E+ + +I+ YR ++E EL IC IL +LD +L+PSS ESKVF
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 475 YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVF 654
Y KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA DIA+ +L PTHPIRLGLALNFSVF
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVF 181
Query: 655 YYEILNSPDRACRLAKAAF 711
YYEILNSPD+AC LAK AF
Sbjct: 182 YYEILNSPDKACNLAKQAF 200
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 299 bits (734), Expect = 1e-81
Identities = 147/206 (71%), Positives = 169/206 (82%)
Frame = +1
Query: 94 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 273
+S + RE+NVY AKLAEQAERY+EMVE M+ VA + ELTVEERNLLSVAYKNVI
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59
Query: 274 GARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 453
GARRASWRIISSIEQKEE++G E + I+ YRS++E EL IC IL +LD +L+PS+
Sbjct: 60 GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119
Query: 454 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGL 633
ESKVFY KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A DIA+ +LP THPIRLGL
Sbjct: 120 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGL 179
Query: 634 ALNFSVFYYEILNSPDRACRLAKAAF 711
ALNFSVFYYEILNSPDRAC LAK AF
Sbjct: 180 ALNFSVFYYEILNSPDRACNLAKQAF 205
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 280 bits (686), Expect = 9e-76
Identities = 139/201 (69%), Positives = 163/201 (81%), Gaps = 2/201 (0%)
Frame = +1
Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN--ELTVEERNLLSVAYKNVIGARRA 288
RE+ VY AKLAEQAERY+EMVE M+ V + + ELTVEERNLLSVAYKNVIGARRA
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 289 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESK 468
SWRI+SSIEQKEE +GA R+YR++VE EL +IC+ IL +LD+ L+P++ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 469 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFS 648
VFY KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA DIAM EL PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
Query: 649 VFYYEILNSPDRACRLAKAAF 711
VFYYEILNSPDRAC LAK AF
Sbjct: 190 VFYYEILNSPDRACTLAKQAF 210
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 254 bits (622), Expect = 5e-68
Identities = 123/181 (67%), Positives = 143/181 (79%)
Frame = +1
Query: 169 EMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDK 348
E +E + A ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE +G +
Sbjct: 3 EYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAH 62
Query: 349 LNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATG 528
IR+YR ++E EL IC IL +LD +L+PS+ ESKVFY KMKGDYHRYLAEF +G
Sbjct: 63 AATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSG 122
Query: 529 NDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAA 708
++RK+AAE+++ AYKAA DIA+ +L PTHPIRLGLALNFSVFYYEILNSPDRAC LAK A
Sbjct: 123 DERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQA 182
Query: 709 F 711
F
Sbjct: 183 F 183
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 165 bits (400), Expect = 4e-41
Identities = 95/201 (47%), Positives = 132/201 (65%)
Frame = +1
Query: 106 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 285
M ERE V AKLAEQAERYD+MVE MK +A +V +++ EER L SV +K IGARR
Sbjct: 1 MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57
Query: 286 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 465
ASWRI+ S+EQK T G + + I Y+ +VE ELR +C+++L ++ + +P + +GE+
Sbjct: 58 ASWRILESLEQKV-TAGDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGEN 115
Query: 466 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 645
VF+YKMKGDY+RYLAEF+TG ++K A + SL+AY+A A F
Sbjct: 116 VVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLF 159
Query: 646 SVFYYEILNSPDRACRLAKAA 708
S+ EI+NSP+RA ++AK A
Sbjct: 160 SLL--EIMNSPERASQVAKQA 178
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 142 bits (345), Expect = 2e-34
Identities = 87/193 (45%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Frame = +1
Query: 172 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 351
MVEAM +VA D LT EERNLLSV YKN+IGA+RA+ RII SIE KEETKG E +
Sbjct: 1 MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57
Query: 352 NMIRAYRSQVEKELRDICSDILGVLDKY-----LIPSSQTGESKVFYYKMKGDYHRYLAE 516
YR +VE E+ IC D++ ++DK + +TG K+ ++ + +
Sbjct: 58 RQTAEYRRKVEAEMDKICCDVINIIDKKGDYYRYLAEFKTGTEKIEVSELSLNAYEACDP 117
Query: 517 FATGNDRKEAAENSLVAYK--------AASDIAMTELPPTHPIRLGLALNFSVFYYEILN 672
F N + + + AS A T+L PT PIRLGLALN SVFY EI+N
Sbjct: 118 FFIFNLFLFSQVTCFIEFTIYQVLVVYTASKTAQTDLTPTDPIRLGLALNISVFYCEIMN 177
Query: 673 SPDRACRLAKAAF 711
SPD+AC+LAK AF
Sbjct: 178 SPDKACQLAKNAF 190
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 469 VFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLA 636
++ Y KGD HR+L E G E + A ++++ P H I LG+A
Sbjct: 456 LYEYMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511
>05_01_0213 - 1606383-1606816,1607695-1608355
Length = 364
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +3
Query: 174 GGGDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIE 353
GGGD++ ++ +V+ + G V RL D PP R +RR R +
Sbjct: 25 GGGDDDGAVVVQVQVQQEEGMSPCVVARLMGLDAMPPPPPETECQPLRRQRRRRRSRSVS 84
Query: 354 HDQSVPQP 377
+ P P
Sbjct: 85 SAEGWPPP 92
>03_05_0469 +
24640925-24641081,24641292-24641644,24641870-24642043,
24642382-24642506,24643011-24643059,24643741-24643899,
24644037-24644219
Length = 399
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 202 RNVSDN-ELTVEERNLLSVAYKNVIGA-RRASWRIISSIE-QKEETKGAEDKLNMIRAYR 372
R +SD E +E+ N + AY+ + + ++ I+S + QKE K E++ ++A
Sbjct: 181 RLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKVIEEEEKKLKAAI 240
Query: 373 SQVEKELRDICSDI 414
+ EK+ +ICS++
Sbjct: 241 EEAEKQYSEICSEM 254
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 30.7 bits (66), Expect = 1.2
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Frame = +1
Query: 94 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVA--SRNVSDN------ELTVEERN-L 246
L TM E+ + L Q ++ + E +K V + ++SD+ L+ +N L
Sbjct: 239 LCKTMEEQSQLASEENL--QVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNAL 296
Query: 247 LSVAYKNVIGARRASW-RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGV 423
LS AY N+ W + ISS+ Q+ G Y+ + K L L +
Sbjct: 297 LSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGS----EIYQESLVKALTKHFGAKLLI 352
Query: 424 LDKYLIPSSQTGESKVFYYKMKGDYHRYL 510
+D L+ S Q+ +SK KGD RY+
Sbjct: 353 IDPSLLASGQSSKSKESESYKKGDRVRYI 381
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 112 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSVAYK 264
+R N + KLAE + E ++ +A +NVS E+T+ E N + V+ K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +1
Query: 106 MSEREDNVYKAKL------AEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 267
+ E ED V K K+ AE + + VEA+K + VE N + A +N
Sbjct: 678 VKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESLEAQLCAANTEVERLNSIVQALEN 737
Query: 268 VIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLD 429
I +A + + + E K E+K ++ + +E +L +++L + D
Sbjct: 738 DIEKEKA---LHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKLRD 788
>07_03_0941 -
22763733-22763970,22764077-22764213,22764282-22764470,
22765238-22765756,22766319-22767357,22767665-22767759,
22768253-22768357
Length = 773
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 364 AYRSQVEKELRDICSDILGVLD 429
AY+SQ EK +R ICS++L + D
Sbjct: 28 AYQSQTEKGIRKICSELLELKD 49
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 91 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 189
HLS M + E+ + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267
>09_04_0292 - 16436918-16439233
Length = 771
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +1
Query: 292 WRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKV 471
W I +SI E+K + + Y +V L CS ++ LIP T S++
Sbjct: 548 WHIATSICCYGESKFDMAQADAELRYHYEVATVLSGYCSYLVAFAPD-LIPDG-TYTSQL 605
Query: 472 FYYKMKGDYHRYLAEFATGNDR 537
++ D H YLAE T +D+
Sbjct: 606 LSCRVLKDAHAYLAECRTTSDK 627
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 261 QERDRRPPRLLADHLLHRTEGRNKRRRRQIEHDQSVPQ 374
Q+RD PPR L+ H ++ + RRR HD PQ
Sbjct: 205 QQRDPSPPRRLSRHDSKESQDISPPRRR-TRHDSEEPQ 241
>07_03_0840 + 21935504-21936424,21936516-21938177
Length = 860
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 434 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 261
Y+SR P + Q + + LR + + LS+APFV +F + +A RAP+ F+
Sbjct: 343 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 399
>07_03_0839 + 21916842-21917852,21917944-21919602
Length = 889
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 434 YLSRT--PRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEEMIRQEARRAPITFL 261
Y+SR P + Q + + LR + + LS+APFV +F + +A RAP+ F+
Sbjct: 373 YISREKRPGYNHQKKAGAMNVMLRVSAL---LSNAPFVINFDGDHYVNNSQAFRAPMCFM 429
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 411 HPRCPRQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCRELAGRV 569
H PR L + ++ L+NEGR +P + + GC + G V
Sbjct: 401 HALVPRTGDGAPLALQPLEKLRLENEGRNKVIPNLLASSMEKEDGCSRVGGAV 453
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 244 GSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTL 137
G S P S R CV +S+PPP R + QPA +L
Sbjct: 217 GGSVPASKATRQSCVT--ASAPPPRRVAPQPAPPSL 250
>12_01_0599 - 4892146-4893552
Length = 468
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 623 RMGWVGGSSVMAMSEAALYATSEFSAASLRSLPVANSAR 507
++GWVGG +VM + Y T+ A R+ AR
Sbjct: 59 QLGWVGGPAVMVVFGGVTYFTATLQAECYRTGDEETGAR 97
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 225 DSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIEHDQS 365
D+ GE+P L + PPR D L + GR K RR + + ++S
Sbjct: 24 DANGEDPEQRELPRQATPPPRGTGD-LRDQINGRRKARRTRDDANRS 69
>07_01_1093 + 10033403-10033984
Length = 193
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 240 EPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRRRQIEH 356
EPA R+Q R A L R GRN++R EH
Sbjct: 52 EPARARIQRASGREAERPARRLTSRCRGRNRQRLTANEH 90
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 180 GDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLA 296
GDE I + A EE A RL+ R+ RPP ++A
Sbjct: 256 GDELDEIARACEAAAALSAEESAYRRLRRRESRPPLVIA 294
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 190 NVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKG 336
+ A +S+N+L + +RN++ K +GA + + SS K+ G
Sbjct: 537 DAACNAISENDLAMLQRNVVKRRTKKELGASKKKYEDSSSRNSKDNNAG 585
>05_05_0149 - 22733703-22736216
Length = 837
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = +1
Query: 112 EREDNVYKAKLAEQAERY-DEMVEAMKNVASRNVSDNELTVEERNL---LSVAYKNVIGA 279
E V LA++ +R +++++ S+N N + E +L L +
Sbjct: 303 ELHPGVSVTDLADKVDRLVEKVIDLELATTSQNAQINRMKTEIDDLHKCLQALEEEKSAL 362
Query: 280 RRASWRIISSIEQKEETKGAEDKL-NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 453
S +++ ++Q EE A L N I+ + KE+ CS++ ++K P Q
Sbjct: 363 VADSSKLVDRLKQVEEVLQAVQHLGNSIQNGTQNIHKEMNAACSELAEFVEKLHEPEPQ 421
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/87 (25%), Positives = 44/87 (50%)
Frame = +1
Query: 139 KLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQ 318
+L + ER +EM+ M+N +S S L E+++ + YK ++S RI E
Sbjct: 1196 RLTLEIERLNEMLNDMENKSSEYKSTILLLNSEKDMSVIQYK------QSSLRI---YEL 1246
Query: 319 KEETKGAEDKLNMIRAYRSQVEKELRD 399
+ + G +++L+ ++KEL++
Sbjct: 1247 ESKLSGVQEELDNAEQKVQMLDKELKE 1273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,910,004
Number of Sequences: 37544
Number of extensions: 382806
Number of successful extensions: 1441
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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