BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmmt10i23 (712 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 214 7e-56 SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48 SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 160 9e-40 SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38 SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 36 0.025 SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 33 0.17 SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30 SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.70 SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 31 1.2 SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 1.2 SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7) 30 2.1 SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 4.9 SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 6.5 SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_44921| Best HMM Match : Pepsin-I3 (HMM E-Value=6.4) 28 8.6 SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 >SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) Length = 248 Score = 214 bits (522), Expect = 7e-56 Identities = 113/202 (55%), Positives = 138/202 (68%), Gaps = 3/202 (1%) Frame = +1 Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 294 RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67 Query: 295 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTG---ES 465 R+ISS+EQK E+ + + YR + EL C+++L +L+ YL+ Q E+ Sbjct: 68 RVISSMEQK----APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEA 123 Query: 466 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 645 KVFY KM+GDYHRYL E A G+ RKE E S AYK AS A EL P+HPIRLGLALNF Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNF 182 Query: 646 SVFYYEILNSPDRACRLAKAAF 711 SVFYYEI N P AC+LAK AF Sbjct: 183 SVFYYEIENKPPEACKLAKEAF 204 >SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 190 bits (462), Expect = 1e-48 Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%) Frame = +1 Query: 172 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 351 M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERKK 55 Query: 352 NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGN 531 YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKGDY+RY E A + Sbjct: 56 QNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGAD 115 Query: 532 DRKEAAENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKA 705 R+E + ++ AY A +IA + LPPT PIRLGLALNFSVFYYEI+ +AC LAK Sbjct: 116 RRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIVEDSKQACDLAKK 175 Query: 706 AF 711 AF Sbjct: 176 AF 177 Score = 67.3 bits (157), Expect = 1e-11 Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 3/63 (4%) Frame = +1 Query: 532 DRKEAAENSLVAYKAASDIAMT---ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAK 702 D E +L AYK A + A T +L PT PIRLGLALNFSVF+YEI + + AC+LAK Sbjct: 204 DNLTVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAK 263 Query: 703 AAF 711 AF Sbjct: 264 QAF 266 >SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) Length = 251 Score = 160 bits (389), Expect = 9e-40 Identities = 82/128 (64%), Positives = 102/128 (79%), Gaps = 1/128 (0%) Frame = +1 Query: 106 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 285 M+++E++VY AKLAEQAERYD+MV +MK VA EL+ E+RNLLSVAYKNVIGARR Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57 Query: 286 ASWRIISSIEQKEETKGAE-DKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 462 ASWRII+SIEQKEE+KG + KL MIR YR +E+EL+ IC +IL +LD LI +SQ+ E Sbjct: 58 ASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEE 117 Query: 463 SKVFYYKM 486 SKVFY K+ Sbjct: 118 SKVFYNKI 125 >SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 219 Score = 155 bits (377), Expect = 3e-38 Identities = 73/145 (50%), Positives = 108/145 (74%) Frame = +1 Query: 106 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 285 M RE +Y AKL+EQ +RYDEM + MK V+ + +L+ EERNLLSV+YKN++G RR Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRR 137 Query: 286 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 465 +SWR+ISSIE+K L +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ E+ Sbjct: 138 SSWRVISSIEEK---TAESSSLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEEN 193 Query: 466 KVFYYKMKGDYHRYLAEFATGNDRK 540 KVFY+K+KGDY+RYLAEF+ G + K Sbjct: 194 KVFYFKLKGDYYRYLAEFSHGQEHK 218 >SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 72.5 bits (170), Expect = 3e-13 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 3/113 (2%) Frame = +1 Query: 88 NHLSSTMS---EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVA 258 NH S + R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV Sbjct: 178 NHPSGVVQMQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVG 234 Query: 259 YKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 417 YKNV+G++R +WR + + + +L I Y+ ++E EL+ +C +IL Sbjct: 235 YKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 36.3 bits (80), Expect = 0.025 Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Frame = +1 Query: 118 EDNVYKAKLAEQAERYDEMV----EAMKNVASRNVSDNELTVEE----RNLLSVAYKNVI 273 + N+ K KL + E Y + + +A +N N N+L +E R+L S+ + N + Sbjct: 1955 DPNLQK-KLKDLEESYQKALKDNEDAERNYLDLNRKYNKLVMEHGNISRDLESLKHDNDL 2013 Query: 274 GARRA-SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 432 R ++ Q++E + A++K+N + AY++ E++LR+ D++ K Sbjct: 2014 KNERIIDLESSLAVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067 >SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) Length = 515 Score = 33.5 bits (73), Expect = 0.17 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Frame = +1 Query: 91 HLSSTMSEREDNVYKAKLAEQAERYDEM---VEAMKNVASRNVSDNELTVEERNLLSVAY 261 H+ M + D V +AK A+ YD + ++ + + + D E +++LL+ + Sbjct: 345 HMEREMDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--H 401 Query: 262 KNVIGARRASWRIISSIEQKEETKGAED 345 K ++G + W++ EQ GAED Sbjct: 402 KKIVGFDKKIWKVHHEKEQMIGAGGAED 429 >SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2520 Score = 32.7 bits (71), Expect = 0.30 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 2/139 (1%) Frame = +1 Query: 130 YKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 309 + KLAE +Y + +E M N A + + + + + +E+ L + K + A++ S + ++ Sbjct: 1460 FNDKLAETQSQYSQDMEEM-NQAKKEL-EIKYSTKEKELRAELEKREVQAKQTSETMTAN 1517 Query: 310 IEQ--KEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYK 483 I Q + E K ++ L + ++ + + S I +++++ SQ Sbjct: 1518 ISQLNEREKKHKQEMLVLENNWKEKYSEIEERYSSQISNIIEQHQREISQ---------- 1567 Query: 484 MKGDYHRYLAEFATGNDRK 540 +K D+H LAE N +K Sbjct: 1568 LKSDHHSELAELKAHNQQK 1586 >SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) Length = 601 Score = 31.5 bits (68), Expect = 0.70 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Frame = +1 Query: 88 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAM----KNVASRNVSDNELTVEERNLLSV 255 N L ST++ER + ++ L E R+DE + ++ KN+ R S N+L +N S Sbjct: 217 NSLVSTLNERLERK-ESTLMECRRRHDEELTSLQKKIKNLEERLSSTNQLISSTKNDESG 275 Query: 256 AYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKE 390 + +I ++ I+ +E+ + AE +L M A ++E E Sbjct: 276 RIQALIKRVCLQYKRINRLEETRHQEKAEMELKM--AQLKEIENE 318 >SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) Length = 1183 Score = 30.7 bits (66), Expect = 1.2 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Frame = +1 Query: 88 NHLSSTMSERED-NVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYK 264 N ++ ER D +V L Q R + + MK R+ ++ + +E++ L A Sbjct: 430 NSVNVLRKERVDLDVQVTNLRSQKIRLEAEISVMKEERRRDDNEVDHLRKEKSDLEKAMH 489 Query: 265 NVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 411 ++ R ++ + I E+T + + +R +EKELRD+ S+ Sbjct: 490 SL---RSEKTKVETDITMAEDTWRKRNDTSELRFEADDLEKELRDLRSE 535 >SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) Length = 1284 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Frame = +1 Query: 130 YKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 309 YK K E + ++ +A ++ S N SDNE+ + RN +S + + R +S + Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082 Query: 310 IEQKEETKGAEDKLN--MIRAYRSQVEKELRD 399 +EQ+++ + + ++N I R +++K + + Sbjct: 1083 LEQEKQQRLEKLEMNNQEIMFLREELQKAVEE 1114 >SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7) Length = 179 Score = 29.9 bits (64), Expect = 2.1 Identities = 16/80 (20%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +1 Query: 94 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER-NLLSVAYKNV 270 LSS +SER + + +L + E Y ++ ++ R+ +L ++ L+++++ Sbjct: 53 LSSVLSERCGELERRQLEMEREFYTKIQALEAQISDRSEEWKDLLAQDHAKLMTISHDTT 112 Query: 271 IGARRASWRIISSIEQKEET 330 + W++ + KE+T Sbjct: 113 YDLKSGYWQVEMDPKDKEKT 132 >SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 283 Score = 29.5 bits (63), Expect = 2.8 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -1 Query: 250 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHYLPFP 110 TA S PP +A C T C + P P P T L H LP P Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83 >SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) Length = 237 Score = 28.7 bits (61), Expect = 4.9 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = -1 Query: 190 SSSPPPFRH-SAQPAQLTLLYTHYLPFPTLWMTNDFTLTKSESPGHLF 50 +S P P+ S QPA T YT Y P T+ T + SP F Sbjct: 73 ASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAPFF 120 >SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1176 Score = 28.7 bits (61), Expect = 4.9 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +1 Query: 481 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHP 618 ++K Y ++L +F KE AENS A A+ A PP P Sbjct: 859 EVKEAYRKWLDDFMKSAREKEIAENSRYASTQAATSAPYASPPPSP 904 >SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1792 Score = 28.3 bits (60), Expect = 6.5 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +1 Query: 103 TMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 261 T+SERE KA++ A E A ++A + ++NE +E R+L +A+ Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840 >SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1122 Score = 28.3 bits (60), Expect = 6.5 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 121 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 249 D VY+ L RY+E+V + N + +N TV +R ++ Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122 >SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) Length = 1998 Score = 28.3 bits (60), Expect = 6.5 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Frame = +1 Query: 112 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNL--LSVAYKNVIGARR 285 E+ N ++ L + ++Y+E++EA++ S+ VEER L L+ A +G Sbjct: 1651 EKMKNDHEQDLTSERKKYEEIIEALQGELSK-AEVRLKEVEERLLSALAEAKSQKLGNDP 1709 Query: 286 ASWRIISSIEQKEETKGAEDKLNM-IRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 462 S I + K KG E + + + A + + E+ L+ + ++ + +K I + Sbjct: 1710 ESPTSIDESDIKLIKKGLEFEYDQKLSAEKRKFEETLQGLRKEVGNLQEKRKII-----Q 1764 Query: 463 SKVFYYKMKGDYHRYLAEFATGNDRKE 543 +V+ + G R++ E + N + E Sbjct: 1765 ERVYNQESFGAVDRHVIEKSIANYKME 1791 >SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1409 Score = 27.9 bits (59), Expect = 8.6 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +1 Query: 121 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER 240 D VY+ L RY EMV + N + +N TV ++ Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209 >SB_44921| Best HMM Match : Pepsin-I3 (HMM E-Value=6.4) Length = 105 Score = 27.9 bits (59), Expect = 8.6 Identities = 18/84 (21%), Positives = 36/84 (42%) Frame = +1 Query: 88 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 267 N + ER + ++ + +D ++ NV R + L + L+ A Sbjct: 21 NKTAELYKERAKALSRSPEETRYSSFDTSLDYNGNVLHRGDLEASLNHQLTEKLAEAESE 80 Query: 268 VIGARRASWRIISSIEQKEETKGA 339 ++ +R + +IS +EQK +GA Sbjct: 81 ILASRMSRDNLISQVEQKIAARGA 104 >SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 960 Score = 27.9 bits (59), Expect = 8.6 Identities = 18/84 (21%), Positives = 36/84 (42%) Frame = +1 Query: 88 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 267 N + ER + ++ + +D ++ NV R + L + L+ A Sbjct: 98 NKTAELYKERAKALSRSPEETRYSSFDTSLDYNGNVLHRGDLEASLNHQLTEKLAEAESE 157 Query: 268 VIGARRASWRIISSIEQKEETKGA 339 ++ +R + +IS +EQK +GA Sbjct: 158 ILASRMSRDNLISQVEQKIAARGA 181 >SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 845 Score = 27.9 bits (59), Expect = 8.6 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -3 Query: 443 GMRYLSRTPRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEE 303 G R RTP ++ + S +W YALI+F+L F+ C++ E Sbjct: 77 GSRLKGRTPHLTRALM--SILSWSEYALILFSL----FIGVACNILE 117 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,170,545 Number of Sequences: 59808 Number of extensions: 376695 Number of successful extensions: 1193 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1082 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1180 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1877743452 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -