Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i18
(702 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 241 9e-65
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 128 8e-31
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 121 1e-28
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 110 2e-25
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 87 2e-18
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 80 3e-16
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 5e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 45 9e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 37 0.003
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.007
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.16
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.49
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.85
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.1
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 1.1
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 28 1.5
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.5
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.6
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 2.6
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.4
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 27 3.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.4
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.4
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 4.5
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 4.5
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 6.0
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 6.0
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 241 bits (589), Expect = 9e-65
Identities = 112/150 (74%), Positives = 131/150 (87%)
Frame = +2
Query: 38 MAADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 217
M LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDAD
Sbjct: 1 MTTRNLTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDAD 60
Query: 218 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 397
GNGTIDF EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+
Sbjct: 61 GNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQ 120
Query: 398 EEVDEMIREADIDGDGQVNYEEFVTMMTSK 487
EEV +MIREAD DGDG +NYEEF +++SK
Sbjct: 121 EEVADMIREADTDGDGVINYEEFSRVISSK 150
Score = 71.3 bits (167), Expect = 1e-13
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 29 MVVMAADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 208
+ +MA + E +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E
Sbjct: 71 LTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREA 130
Query: 209 DADGNGTIDFPEFLTMMARK 268
D DG+G I++ EF +++ K
Sbjct: 131 DTDGDGVINYEEFSRVISSK 150
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 128 bits (309), Expect = 8e-31
Identities = 65/144 (45%), Positives = 94/144 (65%)
Frame = +2
Query: 56 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 235
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ ID
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAID 59
Query: 236 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 415
+F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M
Sbjct: 60 EKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLM 119
Query: 416 IREADIDGDGQVNYEEFVTMMTSK 487
++EAD G +Y +FV + +K
Sbjct: 120 VQEADPTNSGSFDYYDFVQRIMAK 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 121 bits (291), Expect = 1e-28
Identities = 57/143 (39%), Positives = 85/143 (59%)
Frame = +2
Query: 50 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 229
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 230 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 409
+ +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+E++
Sbjct: 90 LQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELE 149
Query: 410 EMIREADIDGDGQVNYEEFVTMM 478
MI E D+D DG++N +EF+ +M
Sbjct: 150 AMIEEFDLDQDGEINEQEFIAIM 172
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 281 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 460
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 461 EFVTMMTSK 487
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 110 bits (264), Expect = 2e-25
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Frame = +2
Query: 77 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 256
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+ +D +FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQV 63
Query: 257 MARKMK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
+ R D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++
Sbjct: 64 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 123
Query: 431 IDGDGQVNYEEFVTMM 478
+ DG VNY +FV M+
Sbjct: 124 VK-DGMVNYHDFVQMI 138
Score = 41.9 bits (94), Expect = 9e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 74 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 253
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V +G +++ +F+
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 254 MM 259
M+
Sbjct: 137 MI 138
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 87.0 bits (206), Expect = 2e-18
Identities = 49/140 (35%), Positives = 77/140 (55%)
Frame = +2
Query: 50 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 229
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E D IN + N
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPP 96
Query: 230 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 409
I+ FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+
Sbjct: 97 INLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVE 156
Query: 410 EMIREADIDGDGQVNYEEFV 469
++R G YE+FV
Sbjct: 157 SILR--SYTSHGVFYYEKFV 174
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 341 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTS 484
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTS 76
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 79.8 bits (188), Expect = 3e-16
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Frame = +2
Query: 35 VMAADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 214
+++ + E+I ++ F D + G+I E ++ S+ NP + L + VD
Sbjct: 12 LISNSSFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDE 67
Query: 215 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNL 379
DG G +DF EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL
Sbjct: 68 DGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNL 127
Query: 380 GEKLTDEEVDEMIREADIDGDGQVNYEEF 466
E + VD+ I E D D DG++++EEF
Sbjct: 128 REDQLQQIVDKTIMEVDKDRDGKISFEEF 156
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 436
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 437 G-DGQVNYEEFVTM 475
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 34.7 bits (76), Expect = 0.013
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 62 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 241
E E +EAF LFD G I ++L LG+N T+ +LQ M++ A NG +
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSRE 66
Query: 242 EF 247
EF
Sbjct: 67 EF 68
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 45.2 bits (102), Expect = 9e-06
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Frame = +2
Query: 194 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV-- 367
+ N DAD NG IDF EF+ ++ + + +++ AF+++D D NG IS E+ +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 368 ----MTNLGEKLTDEE------VDEMIREADIDGDGQVNYEEF 466
M KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 221 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 400
+G ++ EF + + D F VFD D NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 401 EVDEMIREADIDGDGQVNYEEFVTMM 478
++ + D+D +G ++Y+E + ++
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIV 125
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 185 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 364
L D N++D DG G +D P T+ A + S +E+REA R + D +G + +
Sbjct: 21 LTDQFNKLDVDGKGYLDQP--TTIKAFEDSKKGSYDEVREAIREVNVDSSGRVEPEDFVG 78
Query: 365 VMTNLGEKLTDEEV 406
+ L + + EV
Sbjct: 79 IFNVLKKGVEGTEV 92
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 257 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 431 IDGDGQVNYEEFV 469
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +2
Query: 275 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 454
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 455 YEEFVTMM 478
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 442 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 308
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.49
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 442 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 296
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 0.85
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +2
Query: 179 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 358
A +++ V + N ID E + K+ + ++ E V +DG+ I+ E
Sbjct: 318 ARYNELVQAVSSSSNSEIDEVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDEN 377
Query: 359 RHVMTNLGEKLTDEEVDEMIR 421
EKL D +++E ++
Sbjct: 378 DQSPNEATEKLRDNDLEESLK 398
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 47 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 208
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 197 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 325
I+E D + NG + F + + +KD+ EE+ ++F + D+
Sbjct: 545 ISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHDSFGINDE 587
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 29 MVVMAADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 193
+ ++AAD L + + F + F++ DG+ T TT + + E + D
Sbjct: 12 VTIVAADGLYKRDVFRFPDPFAVLTVDGEQTHTTTAIKKTLNPYWNETFEVNVTD 66
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 574 SNTMLILCVMKQNVYLNSLLFTHTLAGGSLRRHHGDE 464
S T+L + +M QN +LN+ F H A + R+ + +E
Sbjct: 199 SQTVLEILLMNQNSFLNNFNFEHIKADFAFRQKNYEE 235
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 365 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 463
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 260 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 436
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 317 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 430
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 26.6 bits (56), Expect = 3.4
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -3
Query: 532 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 353
Y L T+ G + E+ I+ V DIG + + +F + D +L
Sbjct: 172 YCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPEL 231
Query: 352 GRGDEAVAVLVE 317
GD ++ L+E
Sbjct: 232 YEGDRSLESLIE 243
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 191 LEVRLLWGSVLATSSRCPALWS*WCHR 111
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 317 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 430
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/85 (22%), Positives = 31/85 (36%)
Frame = +2
Query: 83 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 262
+ F FD+D DG + +EL + R P N + +G + + +L +
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWS 370
Query: 263 RKMKDTDSEEEIREAFRVFDKDGNG 337
A+ FD DG G
Sbjct: 371 MITLFDYKTTLAYLAYLGFDTDGRG 395
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 TITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 295
T + GT+ S+G + E + ++++ T DFPE L+ +++ EE
Sbjct: 545 TTSLHPFGTLYESIGTIGDPKVEYKAILHDFSCH---TYDFPESLSHCVKRLPTPIPAEE 601
Query: 296 IREAFRVFDK 325
+++ + + DK
Sbjct: 602 LQKRYNLRDK 611
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 454 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 353
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 35 VMAADQLTEEQIAEFKEAFSLFDKDGDGTITTK 133
++AAD L++ + + F++ DG+ T TTK
Sbjct: 12 IVAADGLSKRDLFRQPDPFAILTVDGEQTHTTK 44
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 532 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAV 434
YLNSLL H G L++ H + LAVA+
Sbjct: 299 YLNSLLSVHEKDGVLLQKFHNSYVQYQKLAVAL 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,173,579
Number of Sequences: 5004
Number of extensions: 38256
Number of successful extensions: 181
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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