Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i12
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 102 2e-22
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 34 0.056
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 34 0.056
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 34 0.056
Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical pr... 31 0.69
AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc fi... 31 0.69
Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical pr... 29 2.8
U28409-3|AAN60500.1| 327|Caenorhabditis elegans Hypothetical pr... 28 4.8
U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 28 4.8
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 28 4.8
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 27 6.4
Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 8.5
U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin p... 27 8.5
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 102 bits (244), Expect = 2e-22
Identities = 47/101 (46%), Positives = 68/101 (67%)
Frame = +3
Query: 123 NNIMDALSTGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKCINKPGTSLDSSE 302
+ ++D + LS Q+E+++ VKQQ A+ANAQ L+T ++EKC KCI PG+SL S E
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 303 QKCIAMCMDRYMDSWNLVSRTYSSRIQRERNNM*GCKHYFG 425
++C+ CMDR+M+SWNLVS+T R+Q E + G FG
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFG 102
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 102 bits (244), Expect = 2e-22
Identities = 47/101 (46%), Positives = 68/101 (67%)
Frame = +3
Query: 123 NNIMDALSTGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKCINKPGTSLDSSE 302
+ ++D + LS Q+E+++ VKQQ A+ANAQ L+T ++EKC KCI PG+SL S E
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 303 QKCIAMCMDRYMDSWNLVSRTYSSRIQRERNNM*GCKHYFG 425
++C+ CMDR+M+SWNLVS+T R+Q E + G FG
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFG 102
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.056
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 240 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 368
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 34.3 bits (75), Expect = 0.056
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 240 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 368
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 34.3 bits (75), Expect = 0.056
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 240 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 368
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical
protein B0564.1b protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.69
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 210 IANAQELLT---KMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYM 338
I +E LT ++E+CF C TS L E C++ C+D+ M
Sbjct: 7 IQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQM 53
>AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.69
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 210 IANAQELLT---KMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYM 338
I +E LT ++E+CF C TS L E C++ C+D+ M
Sbjct: 7 IQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQM 53
>Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical
protein F47B10.1 protein.
Length = 435
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 144 STGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKC 266
S+G G Q D+VKQ+ + L+TK T+ KKC
Sbjct: 83 SSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKC 123
>U28409-3|AAN60500.1| 327|Caenorhabditis elegans Hypothetical
protein T25D10.1 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 207 AIANAQELLTKMTEKCFKKCINKPGTSLDSSEQKCIAMCMDRYMDSW 347
++ AQ L+TK FK C++ S + K IA ++ Y + +
Sbjct: 172 SVLEAQNLITKSQRNNFKICVHATLESNKNCSVKAIAQILNHYTNEY 218
>U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 10 protein.
Length = 395
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 282 TSLDSSEQKCIAMCMDRYMDSWNLVSRTYS 371
T L S+EQKC A+ + YM S L+ S
Sbjct: 133 TLLSSTEQKCCALRLAEYMPSRTLIEAVVS 162
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 282 TSLDSSEQKCIAMCMDRYMDSWNLVSRTYS 371
T L S+EQKC A+ + YM S L+ S
Sbjct: 133 TLLSSTEQKCCALRLAEYMPSRTLIEAVVS 162
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 212 SERSRTLNKND*KMFQKVHQ*ARYFFG*LRTEVHS 316
SE + ND KMF +H+ R+F +R VHS
Sbjct: 629 SESDLITDMNDIKMFASLHESLRWFSDEIRELVHS 663
>Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 459 YYSLYLHQSFYSRSSVYSLTCCFS 388
Y++L+LH+ FYS +S Y L F+
Sbjct: 131 YFTLWLHRIFYSLASPYILLSGFT 154
>Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 459 YYSLYLHQSFYSRSSVYSLTCCFS 388
Y++L+LH+ FYS +S Y L F+
Sbjct: 131 YFTLWLHRIFYSLASPYILLSGFT 154
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 473 KVYETTTVYIYIKVFTPEVVFTALHVVSLALNSTAVCPRYEIP*IHVPIHTHSYALLFGA 294
KVY+TT +Y + TP +V ALH +++ C +E +HT L GA
Sbjct: 1591 KVYQTT-LYDSTRPGTPVLVLNALHHGTVSYKLEPNCTFFE-------VHT-----LSGA 1637
Query: 293 IQRSTWL 273
+ +TWL
Sbjct: 1638 VHLATWL 1644
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 473 KVYETTTVYIYIKVFTPEVVFTALHVVSLALNSTAVCPRYEIP*IHVPIHTHSYALLFGA 294
KVY+TT +Y + TP +V ALH +++ C +E +HT L GA
Sbjct: 1591 KVYQTT-LYDSTRPGTPVLVLNALHHGTVSYKLEPNCTFFE-------VHT-----LSGA 1637
Query: 293 IQRSTWL 273
+ +TWL
Sbjct: 1638 VHLATWL 1644
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -3
Query: 473 KVYETTTVYIYIKVFTPEVVFTALHVVSLALNSTAVCPRYEIP*IHVPIHTHSYALLFGA 294
KVY+TT +Y + TP +V ALH +++ C +E +HT L GA
Sbjct: 1591 KVYQTT-LYDSTRPGTPVLVLNALHHGTVSYKLEPNCTFFE-------VHT-----LSGA 1637
Query: 293 IQRSTWL 273
+ +TWL
Sbjct: 1638 VHLATWL 1644
>U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin
protein 19 protein.
Length = 476
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 319 CVWIGTWIHGISYRGHTAVEFNARETTCKAVNTTSG 426
C+W + Y G + N+ + C VNTTSG
Sbjct: 186 CLWDDSLGSAEKYSGFESEGLNSEKGRCVTVNTTSG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,692,573
Number of Sequences: 27780
Number of extensions: 210246
Number of successful extensions: 674
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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