Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i11
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 0.92
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.92
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.92
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 3.7
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 8.6
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 8.6
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 8.6
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 0.92
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 438 TRHYLTVVN*EGYREYILSMVLESS 364
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 0.92
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 438 TRHYLTVVN*EGYREYILSMVLESS 364
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.92
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 438 TRHYLTVVN*EGYREYILSMVLESS 364
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -1
Query: 435 RHYLTVVN*EGYREYILSMVLESS 364
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 504 WTQRLGVMCQILTQSCQPHYCI-LW 575
W+ LG +C + + C P Y I +W
Sbjct: 527 WSHVLGWLCGLSSMLCIPGYMIYIW 551
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 504 WTQRLGVMCQILTQSCQPHYCI-LW 575
W+ LG +C + + C P Y I +W
Sbjct: 580 WSHVLGWLCGLSSMLCIPGYMIYIW 604
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 556 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 669
P +S W + W L CKL+ S Y++ +T+
Sbjct: 88 PFELSVFWQQYPWQWGLGICKLRAYVSETSSYVSVLTI 125
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 160 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 276
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 160 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 276
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 160 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 276
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 535 FSPNHANPIIVSCGWDRTVK 594
F NPI V WD+ V+
Sbjct: 323 FDRMQGNPICVQIPWDKNVE 342
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 500 SWMVYLHSARVFQSLIVLSREPDTI*RLSTEKATESTSLVW 378
SW + +F L++L+ +++ LS + ST+L W
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNW 42
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 521 CHVSDSHPIMPTPLL 565
CH D++ ++ TP L
Sbjct: 463 CHADDAYMVVDTPFL 477
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 521 CHVSDSHPIMPTPLL 565
CH D++ ++ TP L
Sbjct: 463 CHADDAYMVVDTPFL 477
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,264
Number of Sequences: 438
Number of extensions: 4974
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -