Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i08
         (610 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0VBE1 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q2PYK3 Cluster: Amino acid ABC transporter, permease pr...    33   5.3  
UniRef50_UPI0000DA28E1 Cluster: PREDICTED: similar to glycine-, ...    33   7.0  
UniRef50_Q25011 Cluster: FMRFamide-activated amiloride-sensitive...    33   7.0  

>UniRef50_A0VBE1 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 731

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -1

Query: 442 LRGFYLQRSYHTSRRELQNFIPARLHEPFKALHLQKARARPADGVVSH 299
           LRG +L        R+ +  +PA  HE   ALH Q AR    DGVV+H
Sbjct: 524 LRGRHLVLERSVLGRQAEG-VPAHGHEDVVALHAQLARQHVVDGVVAH 570


>UniRef50_Q2PYK3 Cluster: Amino acid ABC transporter, permease
           protein; n=1; uncultured marine bacterium Ant4D3|Rep:
           Amino acid ABC transporter, permease protein -
           uncultured marine bacterium Ant4D3
          Length = 394

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 25/89 (28%), Positives = 38/89 (42%)
 Frame = -2

Query: 600 AFIKFYTNNTNYRISRKNTLI*FLFDFTSQIVCRTQHLVHHSKLRSELRTQKL*GASTYR 421
           AF  F  NN    +S     I F F + +      QHL+ +S   S  R   +   +T  
Sbjct: 35  AFFSFIINNAVVNLSNIGKDINFSFLWDNASYDINQHLIEYSSTSSHFRAMIVGLINTLL 94

Query: 420 EATIHLVVSFKTSFLLGCMNRSRLFIFRK 334
            A   +V++    FLLG M  S  ++ +K
Sbjct: 95  VAVAGIVLATILGFLLGVMRLSSNWLTQK 123


>UniRef50_UPI0000DA28E1 Cluster: PREDICTED: similar to glycine-,
           glutamate-, thienylcyclohexylpiperidine-binding protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: similar to
           glycine-, glutamate-,
           thienylcyclohexylpiperidine-binding protein - Rattus
           norvegicus
          Length = 924

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
 Frame = +2

Query: 104 TCARR---NRAVTWTRSLPTAREDRSFGAPPYLRWSKMKPKRSTRKSSIRLCCTQRGC*D 274
           TC R    + A+ W  ++   R+  ++      RW    P+ ++  S +  C   + C D
Sbjct: 245 TCRRSVSASGAMRWRSAVRWRRKTMTWPRRRNSRWLATVPRCTSSWSYMAFCRASQRCRD 304

Query: 275 RSPCRRSVVRDYAV---SWPCPRFLKMKS 352
           RSPC  S +   AV      CP  L  KS
Sbjct: 305 RSPCPSSPLHLPAVPSTGRQCPHSLAQKS 333


>UniRef50_Q25011 Cluster: FMRFamide-activated amiloride-sensitive
           sodium channel; n=5; Gastropoda|Rep: FMRFamide-activated
           amiloride-sensitive sodium channel - Helix aspersa
           (Brown garden snail)
          Length = 625

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +2

Query: 155 AREDRSFGAPPYLRWSKMKPKRSTRKSSIRLCCTQRGC*DRSPC-RRSVVRDYAVS-WPC 328
           + EDR+F   PYL   + + K      +  L C   GC    PC   S ++  ++S WP 
Sbjct: 374 SEEDRAFIPTPYLACEEREQKNLNNDRTYELSC---GC--FQPCSETSYLKSVSLSYWPL 428

Query: 329 PRFLKMKSLERFMQPSR 379
             F ++ ++ERF +  R
Sbjct: 429 -EFYQLSAVERFFKQER 444


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,853,911
Number of Sequences: 1657284
Number of extensions: 9116411
Number of successful extensions: 21827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21823
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)