Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i08
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   8.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 466 VRASNSEALRGFYLQRSYHTSRRE 395
           V A     LR ++ Q+S+H  RRE
Sbjct: 781 VDAQTMNLLRSYHQQQSHHYGRRE 804


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 520 HFTNCL*NTTPCPSQQTEVRASNSEALR 437
           ++  CL +  PCP Q  +++    EAL+
Sbjct: 42  YYAACLLSKGPCPPQGVDLKRVLPEALQ 69


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 103 NMCPTKSRRDMDTIVTDC 156
           N C   S +D DT+  DC
Sbjct: 14  NRCKLLSCKDFDTLYRDC 31


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 284 TDFCLNNLSECSTNEC 237
           T FC N  ++C T EC
Sbjct: 695 TCFCENGNNKCFTMEC 710


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 278 FCLNNLSECSTNEC 237
           +C  N+++C  N C
Sbjct: 64  YCHENINDCKVNPC 77


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 520 HFTNCL*NTTPCPSQQTEVRASNSEAL 440
           ++  CL +  PC S+  E++ +  +AL
Sbjct: 44  NYIKCLMDEGPCTSEGRELKKTLPDAL 70


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 182 EHRSFCLLGQSVTIVSMSRRDFVGHMFVYSEETFSSFTTI 63
           +HRS+C   Q V   + S  +   +   YS   + S +T+
Sbjct: 231 QHRSWCSSSQPVLSTTNSTTNCYNNYPYYSNMDYLSSSTM 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,304
Number of Sequences: 336
Number of extensions: 2234
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)