Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i07
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0065 - 558521-558675,558765-558835,558914-558998,559366-55...    32   0.51 
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785...    31   0.90 
07_03_1228 - 25009736-25010965                                         29   2.7  
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713     29   4.8  
02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948...    28   6.3  
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798...    28   8.4  

>12_01_0065 -
           558521-558675,558765-558835,558914-558998,559366-559484,
           559570-559718,560116-560157,560413-560484,560788-560897,
           561446-561535,561633-561747
          Length = 335

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 99  DNVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
           DN L     +LS DED+  +SEN   E++   P  EK+ V  + + + R
Sbjct: 287 DNPLYDYPEELSEDEDDDSNSENPFSELDGSDPEYEKEEVEEERDEDGR 335


>04_04_1250 +
           32077590-32078000,32078132-32078308,32078437-32078561,
           32078629-32078761,32078866-32079015,32079105-32079158,
           32079437-32079532,32080021-32080095,32080723-32080824,
           32080903-32081589,32081686-32081817,32081916-32082023,
           32082170-32082319
          Length = 799

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDK 260
           ++ED     E+  EE++E   I++ D+  N DE E  S  D+
Sbjct: 532 KEEDQLSGDEDDTEELDEDQDISDNDSEENDDELELDSDMDE 573


>07_03_1228 - 25009736-25010965
          Length = 409

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +3

Query: 141 EDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR----SFFDKLCEIKSNITV 290
           E+ +   E  +EE  E+  I E +N   ++E E+     SFF K+  I  N+ V
Sbjct: 353 EEEEDDEEEDEEEEEEEEDIEEDENEEEEEEVEDTMPVVSFFAKMSGIMMNVVV 406


>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
          Length = 946

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 132 SRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRS 248
           S D+D+ +  E+  EEI E+    E++     DE EN S
Sbjct: 340 SSDDDDDVEVEDVDEEIGEENAEEEEEGEEGADEEENDS 378


>02_05_0036 -
           25292150-25293124,25294021-25294206,25294704-25294874,
           25295135-25295353,25295461-25295712,25295802-25295903,
           25296487-25296684,25296762-25297046,25297640-25297709,
           25297797-25297970,25298825-25298952,25299059-25299163,
           25299686-25300030,25300361-25300563,25300964-25301045,
           25301667-25301744
          Length = 1190

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
 Frame = +3

Query: 198 INEKDNVNNKDEFENRSFFDKLCEIKSNITVEPIFAGLIIPSTLARL-AIQNLNLDKACR 374
           IN+KD +N + + +N  F  +LC+ K    + P  A L+     + L    + N+D AC 
Sbjct: 553 INKKDQINIETKIKNIRFIGELCKFK----IAP--AALVFSCLKSCLDDFSHHNIDVACN 606

Query: 375 VKSQFGDVVCDALIERKGNYTTQEAEIQQIISHIESWRTI 494
           +        C   + R    T + A + +I+  +++ + +
Sbjct: 607 LLE-----TCGRFLYRSPETTIRMANMLEILMRLKNVKNL 641


>09_04_0087 +
           14476539-14476675,14478876-14479635,14479720-14479871,
           14479958-14480024,14480632-14480831,14480915-14481068,
           14481585-14481669,14481766-14481857,14482575-14482766,
           14482867-14482992,14483072-14483125,14483494-14483550,
           14484509-14484606,14484703-14485038,14485116-14485203,
           14486891-14487016,14487082-14487138,14488054-14488133,
           14488228-14488270,14488948-14489034,14489331-14489420,
           14489996-14490054,14490141-14490231,14490330-14490495,
           14490662-14490755,14491787-14492909
          Length = 1537

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +3

Query: 126 KLSRDEDNKMSSENTK---EEINEQVPINEKDNVNNKDEFENRSFFDKLCEIK 275
           K   +E+ K+  E  K   E++ E+   NE++N N KD+ EN +  +K+   K
Sbjct: 253 KEDENEEEKLEEEEKKDKEEKLEEKEKENEEENGNEKDK-ENDNEIEKVKNTK 304


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,133,018
Number of Sequences: 37544
Number of extensions: 367221
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)