Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i07
(709 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24) 49 3e-06
SB_43212| Best HMM Match : MFS_1 (HMM E-Value=0.00051) 48 1e-05
SB_57014| Best HMM Match : PMP22_Claudin (HMM E-Value=4.6) 42 6e-04
SB_12219| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 31 0.69
SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15) 31 0.92
SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025) 31 1.2
SB_15468| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=7.4) 31 1.2
SB_49164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4) 29 4.9
SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35) 29 4.9
SB_22292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_34412| Best HMM Match : MARVEL (HMM E-Value=0.047) 28 6.5
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43) 28 6.5
SB_50116| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_24592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_55829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_25135| Best HMM Match : VWA (HMM E-Value=2.2) 28 8.5
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 28 8.5
>SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24)
Length = 1193
Score = 49.2 bits (112), Expect = 3e-06
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Frame = +3
Query: 177 EINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNITVEPIFA----GLIIPSTLARLAI 344
E N + ++ + ++D + S + + S ITVEP+ G+I+ + + I
Sbjct: 4 EENNRSKDSKSPSPESEDSSSDTSLYRRFESCFSGITVEPVIFCYAFGIILHVPVIQQYI 63
Query: 345 -QNLNLDKACRVKSQFGD--VVCDALIERKGNYTTQEA--EIQQIISHIESWRTIIQTAI 509
Q L+ K + D C+ + + T E E+Q S+++ ++ +
Sbjct: 64 HQRLSEGKGLTYEYNNTDSRTTCEPIQMANSSEETLELQKEVQAEASYMQMG-LVLSVST 122
Query: 510 PTLLV-IFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLSTYFFYEIPVETTMFLEAI 680
P+LLV + +GAWSDR G R+ + +PIFG S ++ ++E+PV + E I
Sbjct: 123 PSLLVALLLGAWSDRAGRRR-AMAMPIFGS--AVESAIILVIMYFELPVTFLLLAEFI 177
>SB_43212| Best HMM Match : MFS_1 (HMM E-Value=0.00051)
Length = 446
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 279 NITVEPIFAGLIIPSTLARLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQ 458
+ITVEP+ + + ++ +Q L K C K + C+ L +Y ++ +Q
Sbjct: 9 SITVEPVLFLYMFCTFMSSPLLQQLAYRKIC--KEHYNTSACNNL----SDYQNEQNYVQ 62
Query: 459 QIISHIESWRTIIQTAIPTLLV-IFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLSTYF 635
S+ ++ + A+P++ + +GAWSDR G + I IL P+ G ++ ++ +L+ +F
Sbjct: 63 TSTSNWMRYQALA-LALPSIASSLVLGAWSDRVGRKAIMILPPV-GNILMNINYMLNVHF 120
Query: 636 F 638
F
Sbjct: 121 F 121
>SB_57014| Best HMM Match : PMP22_Claudin (HMM E-Value=4.6)
Length = 177
Score = 41.5 bits (93), Expect = 6e-04
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Frame = +3
Query: 282 ITVEPIFAGLIIPSTLARLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQ----EA 449
+T+EP+ + + IQ K + K F D + Y + E
Sbjct: 12 LTIEPVIFLYVYGILMHGPVIQQFVYSKIAKQKGFFYDPSSHTGCGNETRYNSTLHNLEQ 71
Query: 450 EIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLST 629
E+Q ++++ T+ ++ +L + +G+WSD G RK ILLP+ G + V ++
Sbjct: 72 EVQATAAYVQIGITMFESLPSIVLSLMVGSWSDCHG-RKPAILLPVIGSMLEAVCVLIVM 130
Query: 630 YFFYEIPVETTMFLEAIFPAITG 698
Y ++ V +F+ A+ +G
Sbjct: 131 YCDLDVYV---LFIGALLNGCSG 150
>SB_12219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 126 KLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNITVE 293
K + +++ S EN E VP EKD+ D N + ++ E+K+ + VE
Sbjct: 4 KSTNGDESVQSGENDLENNRALVPFKEKDSGTTADSSGNETDDSEVNELKAQVAVE 59
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +3
Query: 105 VLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
++V + D+++++ +E+ NE+ I E+++ N K+E E R
Sbjct: 129 LMVKRKLREKEDDNDEVEEIEKREDANEKEEIEEREDANEKEEIEER 175
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
R++DN+ +E+ NE+ I+E+++ N ++E E R
Sbjct: 175 REDDNEKEEIEEREDDNEKEEIDEREDDNEEEEIEER 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
R++ N+ +E+ NE+ I E+++ N K+E E R
Sbjct: 151 REDANEKEEIEEREDANEKEEIEEREDDNEKEEIEER 187
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
R++ N+ +E+ NE+ I E+++ N K+E + R
Sbjct: 163 REDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDE 233
++E + +N KEEI E+ NEK+ ++ +++
Sbjct: 169 KEEIEEREDDNEKEEIEEREDDNEKEEIDERED 201
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEK----DNVNNKDEFEN 242
R++DN+ + +E+ NE+ I E+ D V +DE EN
Sbjct: 187 REDDNEKEEIDEREDDNEEEEIEEREDDDDEVEERDETEN 226
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDK 260
++E + N KEEI E+ NEK+ + +++ + D+
Sbjct: 157 KEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDE 198
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +3
Query: 93 TRDNVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEI 272
+R N V +S+D+D ++S+N++ I+ +VP K N K E + +++CE+
Sbjct: 161 SRQNSEECVNKSISKDKD--LNSDNSERSIDNRVPEERKSNSEQKSE---QLTNNRICEV 215
Query: 273 KSNITVE 293
S+ + E
Sbjct: 216 NSSDSEE 222
>SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15)
Length = 1029
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +3
Query: 108 LVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNIT 287
++ + F+L+ D + ++S +NT E+I +P ++K + FEN IKS +
Sbjct: 113 VIGLEFRLA-DSNKEISVQNTLEDIEVVIPADQKSARKFTNTFENNKNRTHFYRIKSEVA 171
Query: 288 VEPIFAGLIIPS 323
+ + PS
Sbjct: 172 LNSPLLIYVEPS 183
>SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025)
Length = 930
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 444 EAEIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVL 623
E E+Q S + + + + +V F G+++DR G RK ++ P+ G + + VL
Sbjct: 69 EMEVQSASSELYMYYLGVWALSISFIVPFTGSYTDRRG-RKPGLIAPLVGAILETL--VL 125
Query: 624 STYFFYEIPV 653
++E+PV
Sbjct: 126 FLVLYFELPV 135
>SB_15468| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=7.4)
Length = 212
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 102 NVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDK 260
N + V +L R +++ + + N +E+ E+ E+ NN DEF +S + +
Sbjct: 58 NKIKVVEGELQRIDNDLIQNVNDSDELRERTEECERQQANNTDEFVRQSLYSR 110
>SB_49164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 444 EAEIQQIISHIESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVL 623
E E+Q S + + + + +V F G+++DR G RK ++ P+ G + + VL
Sbjct: 87 EIEVQSASSELYLYYLGVWALSISFIVPFTGSYTDRRG-RKPGLIAPLVGAILETLVLVL 145
Query: 624 STYFFYEIPV 653
Y E+PV
Sbjct: 146 VLYL--ELPV 153
>SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4)
Length = 277
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENR 245
R NK+ +E + I+ ++ +++ N NN+DE + +
Sbjct: 93 RIASNKVDAEKVDKAIDRKISLHKHSNYNNEDELKEK 129
>SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 132 SRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRS 248
+ + DNK + N+ E + NE DN N+ +E +N +
Sbjct: 31 NNNSDNKNDNNNSDNENDNNNSYNENDNSNSDNENDNNN 69
>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
Length = 442
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 132 SRDEDNKMSSENTKEEINEQVPINEKDNVNNKDE 233
+R+E ++ ++E E+VP+NE++ N E
Sbjct: 128 AREEVKELMKSKSRESTREEVPMNEQETANTNAE 161
>SB_22292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 126 KLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRS 248
K++ + + K +E++KEE+ E + +N+N K+E S
Sbjct: 24 KMTENLNKKEEAESSKEEVKEVLKRKMTENLNKKEEMRKIS 64
>SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 126 KLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLC 266
KL DED +E+ ++++ P N ++ ++DE E+ C
Sbjct: 106 KLPSDEDTNGETEDDEDDVLPCTPENNNEDAPDRDELEHCEISPNRC 152
>SB_34412| Best HMM Match : MARVEL (HMM E-Value=0.047)
Length = 441
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 165 NTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNITVEPIFAGLIIPST 326
N++++ N ++ I +D+ D EN++ ++K C+ ++ I + P II ST
Sbjct: 236 NSRKDSNRRLQIIPRDSY---DYMENQALYNKACKTRALIGLYPFSMYFIILST 286
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 MSSENTKEEINEQVPINEKDNVNNKDEFENRS 248
+S ENT +IN ++P EK + +K++ NRS
Sbjct: 4 LSEENTLLDINIELP-QEKKTLKSKEDLRNRS 34
>SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 153 MSSENTKEEINEQVPINEKDNVNNKDEFENRS 248
+S ENT +IN ++P EK + +K++ NRS
Sbjct: 4 LSEENTLLDINIELP-QEKKTLKSKEDLRNRS 34
>SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43)
Length = 774
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 54 YKLFYRHRVK*TLTRDNVLVSVYFKL--SRDEDNKMSSENTKEEINEQVPINEKDNVNNK 227
Y+L+ RH+ T T+ N+L+ + L + +++N ++ N N N +N NN
Sbjct: 558 YRLYMRHQQ--TSTKLNLLLLLLLLLYNNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNA 615
Query: 228 DE 233
D+
Sbjct: 616 DD 617
>SB_50116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 138 DEDNKMSSENTKEEINEQVPINEKDNVNNKD 230
D DN ++N + N+ IN+ DN N+ D
Sbjct: 48 DNDNDNDNDNDNDNDNDNDNINDNDNDNDND 78
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 138 DEDNKMSSENTKEEINEQVPINEKDNVNNKD 230
D DN ++N + IN+ N+ DN N+ D
Sbjct: 54 DNDNDNDNDNDNDNINDNDNDNDNDNDNDND 84
>SB_24592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 96 RDNVLVSVYFKLSRDEDNKMSSENTKE-EINEQVPI-NEKDNVNN 224
RD V V+F + + D + S+ T+E +I+ + I N +D NN
Sbjct: 106 RDGVKWGVFFAMGKTGDTSLDSKTTREAQIHNDILIGNFRDTYNN 150
>SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 105 VLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSN- 281
VL S+ +KL +++S EN E+ +V +NE D + K + E K + SN
Sbjct: 174 VLDSIAYKLDDCFTDRVS-ENIIEDTKNKVKLNEDDFITRKKQLERYLDVTKSQMLFSNG 232
Query: 282 -ITVEPIFAGLIIPS 323
+ E + L++P+
Sbjct: 233 ILFAEGVSEELLVPA 247
>SB_55829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 93 TRDNVLVSVYFKLSRDEDNKMSSENTKEE-INEQVPINEKDNVNNKDEFENR 245
TRDN+L + +RD ++ E+T+E +N++ + +DN+++ +E R
Sbjct: 455 TRDNMLNQEEKRDTRDNLSRGEEEHTRENMLNQEGKRDTRDNLSHGEEEHTR 506
>SB_25135| Best HMM Match : VWA (HMM E-Value=2.2)
Length = 233
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 138 DEDNKMSSENTKEEINEQVPINEKDNVNNKDEFEN 242
D DN + +++N ++ D+VNN D+ +N
Sbjct: 169 DVDNNDDDVDNADDVNNADDVDNNDDVNNADDADN 203
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/36 (25%), Positives = 25/36 (69%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFEN 242
+D+D+ + +N K++ + V N+KD+ ++ D++++
Sbjct: 790 KDDDDSVVDDNDKDDDDSVVDDNDKDDDDSVDDYDD 825
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,515,201
Number of Sequences: 59808
Number of extensions: 450829
Number of successful extensions: 1516
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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