Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i07
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    26   1.3  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   4.1  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   9.4  

>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = -3

Query: 653 DWNLIKEVSAQYIAHADHKFTEDWEEYANFSVARPVAPSSHEDNQKC 513
           DW  + +  + Y   A HK T+   +Y  F +       SH  +  C
Sbjct: 44  DWACLVQWESSYSTTATHKNTDGSTDYGIFQINNAYWCDSHYGSNLC 90


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 683 EYRF*EHCGFDWNLIKEVSAQYIAHADHKFTEDWEEYANFSVARPVA 543
           +Y    H GF+  + +E SA  IAH  HK        ++++ A PVA
Sbjct: 135 DYHADHHTGFNAVVRREPSAVKIAHPVHKVIAQPVHVSSYAHA-PVA 180


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = -3

Query: 683 EYRF*EHCGFDWNLIKEVSAQYIAHADHKFTE---DWEEYANFSVARPVAPSSH 531
           +Y    H GF+  + +E SA  IA   HK      D   YA+  VA       H
Sbjct: 135 DYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVDVSSYAHAPVAHATVQHHH 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,348
Number of Sequences: 2352
Number of extensions: 15798
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)