Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i07
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 36 0.021
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 34 0.11
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 31 0.81
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81051-7|CAB02868.1| 167|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 2.5
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 4.3
AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protei... 29 4.3
AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal chem... 29 4.3
U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical pr... 28 5.7
U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical p... 28 5.7
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 28 5.7
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 28 5.7
AC006627-6|AAK85462.3| 249|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.9
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 27 9.9
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 438 TQEAEIQQIISHIESWRTIIQTAIPTLLVI-FMGAWSDRTGNRKICILLPIFGEFMVCVS 614
T + ++++ I++ + + I+ T IPTL+V +G WSDR G RK +L +FG F+
Sbjct: 116 TLQDDVEKDIANTKIYLQIMGT-IPTLIVSPLIGNWSDRNG-RKSPLLFSLFGLFINNFI 173
Query: 615 NVLSTYFFYEIPVETTMFLEAIFPAITGG 701
+ +T + + V F+ + GG
Sbjct: 174 LLCATLTYETVNVYYWFFISEFMLGMFGG 202
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.11
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +3
Query: 294 PIFAGLIIPSTLARLAIQNLNLDKACRVKSQFGDVVCDALIERKGNYTTQEAEIQQIISH 473
P+F ++ S L QNL +K C +K Q + C R + + +IQ +H
Sbjct: 13 PLFL-YMLGSYLNYPVFQNLIYEKECLIKYQQNETFC-----RNVSAYYDDKDIQAAANH 66
Query: 474 ---IESWRTIIQTAIPTLLVIFMGAWSDRTGNRKICILLPIFGEFMVCVSNVLSTYFFYE 644
I S + + + TLL +GA +D + KI +++P G + ++ V +YF +
Sbjct: 67 FYFISSLTLLCPSLVTTLL---LGAATD-YWSIKIPLIIPYIGCILGTINYVFQSYFIH- 121
Query: 645 IPVETTMFLEAIFPAITGGWV 707
V + +A+F + GG++
Sbjct: 122 TSVYFLLISDALF-GLCGGFI 141
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 150 KMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDK 260
K+ E K+E Q P + + V KD+++N+ FFD+
Sbjct: 1075 KIEDEEKKDE--SQTPSEKSETVVKKDDYDNKHFFDE 1109
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +3
Query: 81 K*TLTRDNVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDK 260
K +L + +S Y+K ++E +K E KE++N D + K +++F
Sbjct: 215 KGSLESATISISFYYKCEKEEADKHVKEIQKEQMNSTKKFTMLDVIQQK-SLRDKAFVGA 273
Query: 261 LCEIK---SNITVEPIFAGLIIPSTLARLAIQNLNLDKACRVKSQFGDVVCDALIERKG 428
+ S + V FA I+ +T + +L D A + S V+ A+I++ G
Sbjct: 274 VVTFVMSFSGVAVISAFAFEILVNTGLNVLQASLAND-ATTIVSVISSVLAIAIIDKNG 331
>Z81051-7|CAB02868.1| 167|Caenorhabditis elegans Hypothetical
protein C55A6.8 protein.
Length = 167
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 689 GWEYRF*EHCGFDWNLIKE 633
GW Y + EHC FD +IK+
Sbjct: 16 GWPYHYVEHCIFDLRIIKD 34
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 641 IKEVSAQYIAHADHKFTEDWEEYANFSVARPVAPSSHEDNQKCGYGGLYNSP----P*FN 474
I+ +S + H +F D + F V + P ++NQK G G +YN P FN
Sbjct: 1870 IEHMSRTLLLHCIREFRGD-DRIRQF-VFNLIRPQGIQENQKLGAGSMYNQGWAGLPEFN 1927
Query: 473 M*NYLLDLGF 444
++ LD F
Sbjct: 1928 PPSFALDSAF 1937
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 129 LSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFE 239
+ ++ +M +E KEEI ++ I E +N DEF+
Sbjct: 173 IHKEIQRQMENETKKEEIERRIKIFEVENSGISDEFQ 209
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 93 TRDNVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFE 239
+ N+L V KL + E+ +++ +E+ E++ +EK+ K E E
Sbjct: 127 SEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELE 175
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 93 TRDNVLVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFE 239
+ N+L V KL + E+ +++ +E+ E++ +EK+ K E E
Sbjct: 127 SEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELE 175
>AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protein
protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 216 VNNKDEFENRSFFDKLCEIKSNIT 287
V N D N F DKLC+++SNI+
Sbjct: 138 VPNYDAIFNLKFLDKLCQMQSNIS 161
>AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal
chemotaxis protein 14 protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 216 VNNKDEFENRSFFDKLCEIKSNIT 287
V N D N F DKLC+++SNI+
Sbjct: 138 VPNYDAIFNLKFLDKLCQMQSNIS 161
>U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical
protein ZC196.6 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 171 KEEINEQVPINEKDNVNNKDEFENRSFFDK-LCEIKSNITVEPIFAGLIIPSTLARLAIQ 347
KE+++ + + +DN D+ +N S K + + + + V + S +
Sbjct: 214 KEDVDSSIELENEDNCQIDDDIKNTSEVRKEITKFEETVAVPDENEQSFVNS--SNFVDP 271
Query: 348 NLNLDKACRVKSQFGDVVCDALIERKGNYT 437
N + + ++Q DVV + +E+ GN T
Sbjct: 272 NCEKETSNEDQNQQNDVVAEETMEKPGNLT 301
>U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical
protein C10G8.8b protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 132 SRDEDNKMSSENTKEEINEQVPINEKDNV 218
S+D++N +S+ TKEE +E V + NV
Sbjct: 250 SKDKENTENSDETKEESSEDVKEDSNQNV 278
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 132 SRDEDNKMSSENTKEEINEQVPINEKDNV 218
S+D++N +S+ TKEE +E V + NV
Sbjct: 340 SKDKENTENSDETKEESSEDVKEDSNQNV 368
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 108 LVSVYFKLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDE 233
L+ + + S + DN+ E EE + VP+ E+ +V N +E
Sbjct: 667 LIEIGKEKSEERDNQKLEEEEDEEDLDGVPLEEEKSVQNMNE 708
>AC006627-6|AAK85462.3| 249|Caenorhabditis elegans Hypothetical
protein E01A2.5 protein.
Length = 249
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PINEKDNVNNKDEFENRSFFDKLCEIKS-NITVEPIFAGLIIPS 323
P N+K + D E F+ LCE+K + V+ + AG I+ S
Sbjct: 77 PKNQKSDYEKTDGDEVEDLFELLCEVKKHHPEVKGVSAGAILSS 120
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 135 RDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNITVE 293
+DE N S E N +VP +K N++ + E + D L ++K + E
Sbjct: 54 KDEKNSNSEEKKTTSSNNEVPPQKKLIGNDEVKKEKKKSEDDLLDVKKTASKE 106
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 126 KLSRDEDNKMSSENTKEEINEQVPINEKDNVNNKDEFENRSFFDKLCEIKSNI 284
K +D ++ SEN + P K NV NK E + + E SN+
Sbjct: 331 KSEKDSEDSGDSENENSSSTDSRPSKPKKNVENKKSEEKINNSSEKKEYSSNV 383
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 586 IGRSMQIFLLPVLSLQAPMKITRSVGMAVCIIVLHDS 476
IGR++ ++ P+ + APM +G + +IVLH S
Sbjct: 86 IGRTL-VYFTPLCPIIAPMFYEPLIGFKIMMIVLHHS 121
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 321 STLARLAIQNLNLDKACRVKSQFGDVVCDAL 413
+ LA + + N++ KA ++S F +V CDAL
Sbjct: 998 ANLASVVLANMSTIKAYNLQSHFYNVFCDAL 1028
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,321,937
Number of Sequences: 27780
Number of extensions: 348913
Number of successful extensions: 1196
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -