Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i05
(441 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 29 0.24
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 0.55
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.73
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 1.7
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 27 1.7
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 1.7
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 5.2
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 25 5.2
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 9.0
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 24 9.0
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 24 9.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 24 9.0
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 24 9.0
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 29.5 bits (63), Expect = 0.24
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 295 NFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFV 179
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 0.55
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 155 DYNPNG-NGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 259
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 0.73
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 108 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 257
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 1.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 90 PTLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 254
PT++ T T ++ T T + + TT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 149 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 247
PK PN N +P NG + PP Y KPT
Sbjct: 46 PKASKPNSN--QPYPNGPVCIYPPNIYLYAKPT 76
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 1.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 181 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 288
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 5.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 DVRAVVNRFVAVSLSVG-HSQQSEDENHEEF 50
+VR V NRFVAV L G DE ++F
Sbjct: 1056 NVRRVTNRFVAVKLDCGIDGNIKADEVSDDF 1086
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 5.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 152 KDYNPNGNGYEPIDNGAYYVDPPQGRP 232
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 24.6 bits (51), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 75 LCWLWPTLKETATNLLTTARTS 140
+ W W TL TA +L+TA S
Sbjct: 1 MIWFWSTLLVTAIAVLSTANES 22
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 9.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 119 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 205
+++ PY+ N D+N NGN P+ +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 24.2 bits (50), Expect = 9.0
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 SPVITRDHIKMKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDN 196
+P+ H F+ A A+ N N Y PI PY N PN PI
Sbjct: 388 TPLTAPIHATESFWPSAAAAAAAVHN-NANSYMPITPTPYPNNAKIFGYPNQPPLTPIPF 446
Query: 197 GAYYVDP-PQGR 229
+ + P P GR
Sbjct: 447 TGFVLHPAPVGR 458
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 24.2 bits (50), Expect = 9.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 98 QGNGYEPIDNRPYIVNPPKDYNPNGNGY 181
QG G + D PY ++P Y P G Y
Sbjct: 186 QGAGVKA-DINPYNLSPYSQYGPEGTAY 212
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.2 bits (50), Expect = 9.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 104 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 256
N Y PI VNP Y P+G G+ V PP+ +P + P P
Sbjct: 982 NPYTPIAVASSTVNPAHTYKPHG--------GSQIVPPPK-QPANRVVPLP 1023
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 24.2 bits (50), Expect = 9.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 71 LALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAY 205
LAL ++ Q Y I+ P N P +N N N + I AY
Sbjct: 86 LALESLKGIQSKWYGYIEYLPKTFNTPLYFNENDNAF-LISTNAY 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,625,607
Number of Sequences: 5004
Number of extensions: 35034
Number of successful extensions: 118
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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