Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i03
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   6.6  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 15/67 (22%), Positives = 24/67 (35%)
 Frame = +3

Query: 360  IRAGLAVTMVVTKADIKAVIREASADFQGTRAMEGTDRDIRAAVPVTRATNLDTTNTDPV 539
            +R        V K+ +           QG   ++     I+  V       L T  T+P+
Sbjct: 1037 VRGASGTASTVVKSGVSTAGGLFMKQLQGAAPVDDRLELIKPQVTPATPPALTTPPTEPI 1096

Query: 540  STGTPRP 560
            S+ TP P
Sbjct: 1097 SSATPAP 1103


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 113 SSRPPSSITKEDSNNSLYKYLITEFTIDNFVL 18
           ++RPP+   +      LY+ L+ +F I   +L
Sbjct: 392 TTRPPTGCWETAIGQELYRLLVVDFFISTVLL 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,655
Number of Sequences: 2352
Number of extensions: 6710
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)