Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i03
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039050-14|AAC47928.1|   69|Caenorhabditis elegans Neuropeptide...    30   1.3  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    29   3.9  
AL031620-5|CAA20926.1|  277|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z75547-12|CAN99725.1|  141|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68314-1|CAA92658.1|  102|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68006-7|CAA91995.2|  783|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF497831-1|AAM18109.1|  783|Caenorhabditis elegans putative Na-H...    28   6.9  
AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    28   6.9  
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U46753-7|AAA85763.2|  223|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AF039050-14|AAC47928.1|   69|Caenorhabditis elegans
           Neuropeptide-like protein protein30 protein.
          Length = 69

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 494 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDG 595
           GY GY  GY  Y   +  Y     G  +GGYG G
Sbjct: 35  GYGGYGRGYGGYGRGYGGYGRGMWGRPYGGYGWG 68


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
 Frame = +3

Query: 279 ATAARVSVTEIPV*VTATPVSVI----RVKVIRAGLAVTMVVTKADIKAVIREASADFQG 446
           +T  R++ T+    +T TPV V      +      L  T   T+   K       A    
Sbjct: 339 STTKRLTTTKATTVLTTTPVKVTPATTTLPTTSLALETTTTATRTTAKITAVATVARTNT 398

Query: 447 TRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGT 551
           T+    T      A+P T  ++  T +TD  ST T
Sbjct: 399 TQPPTTTPLSSTTALPTTLTSSSSTESTDGSSTQT 433


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
 Frame = +3

Query: 282 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 452
           T AR + T IP   T T +   S +   V    +  T V T   +  V    +     + 
Sbjct: 235 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 294

Query: 453 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRP 560
           A   T     +     VT +TN  ++ T P ++ TP P
Sbjct: 295 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 332


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
 Frame = +3

Query: 282 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 452
           T AR + T IP   T T +   S +   V    +  T V T   +  V    +     + 
Sbjct: 217 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 276

Query: 453 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRP 560
           A   T     +     VT +TN  ++ T P ++ TP P
Sbjct: 277 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 314


>AL031620-5|CAA20926.1|  277|Caenorhabditis elegans Hypothetical
           protein C18B12.5 protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 497 YPGYKSGYNQYRSSFDRYP 553
           Y GYK G+++++ SF +YP
Sbjct: 256 YLGYKYGFSEFKLSFKKYP 274


>Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 551 PATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVE 652
           P    GN  GG G+G  D+F  +AR   E KK++
Sbjct: 399 PGGPGGNNGGGAGNGGFDDFDDLARRFEELKKIK 432


>Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 551 PATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVE 652
           P    GN  GG G+G  D+F  +AR   E KK++
Sbjct: 412 PGGPGGNNGGGAGNGGFDDFDDLARRFEELKKIK 445


>Z75547-12|CAN99725.1|  141|Caenorhabditis elegans Hypothetical
           protein K10C8.3b protein.
          Length = 141

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 551 PATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVE 652
           P    GN  GG G+G  D+F  +AR   E KK++
Sbjct: 108 PGGPGGNNGGGAGNGGFDDFDDLARRFEELKKIK 141


>Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 551 PATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVE 652
           P    GN  GG G+G  D+F  +AR   E KK++
Sbjct: 399 PGGPGGNNGGGAGNGGFDDFDDLARRFEELKKIK 432


>Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 551 PATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVE 652
           P    GN  GG G+G  D+F  +AR   E KK++
Sbjct: 412 PGGPGGNNGGGAGNGGFDDFDDLARRFEELKKIK 445


>Z68314-1|CAA92658.1|  102|Caenorhabditis elegans Hypothetical
           protein F07H5.6 protein.
          Length = 102

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 494 GYPGYKSGYNQ-YRSSFDRYPATNAGNFFGGYGDGY 598
           G+ G+  GY   Y   F  Y     G   GGYG GY
Sbjct: 39  GFGGFSGGYGLGYGGGFGGYGGGFGGYGLGGYGLGY 74


>Z68006-7|CAA91995.2|  783|Caenorhabditis elegans Hypothetical
           protein K09C8.1 protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 428 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 345
           +LP + LD     HH + Q  PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654


>AF497831-1|AAM18109.1|  783|Caenorhabditis elegans putative Na-H
           exchanger isoform 7 protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 428 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 345
           +LP + LD     HH + Q  PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654


>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 494 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNF 610
           G PGY   YN Y S   R P   A  +  GY   Y+  +
Sbjct: 232 GTPGYAPAYNPY-SYVLRSPVAAAPGYAQGYAPAYAQGY 269


>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
           protein R134.1 protein.
          Length = 1140

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 534 PVSTGTPRPTLVISLEXXXXXXXXXLGWS 620
           PVSTGT RP L + +          +GW+
Sbjct: 25  PVSTGTTRPKLKVGIAAAQKTQSASIGWN 53


>U46753-7|AAA85763.2|  223|Caenorhabditis elegans Hypothetical
           protein C34F11.8 protein.
          Length = 223

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 494 GYPGYKSGY-NQYRSSFDRYPATNAGNFFGGYGDGY 598
           G  G  SGY N Y  S+  Y     G + GGYG GY
Sbjct: 150 GRYGPYSGYGNSYYPSYGGYSGYGGG-YGGGYGGGY 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,427,371
Number of Sequences: 27780
Number of extensions: 159102
Number of successful extensions: 604
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)