Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10i01
(295 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-14
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 6e-12
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 64 1e-11
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-10
SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28) 54 2e-08
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 54 2e-08
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-08
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-07
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 49 6e-07
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-06
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 3e-04
SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.16
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.28
SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 27 2.6
SB_16540| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.0
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 26 6.0
SB_44717| Best HMM Match : 7tm_1 (HMM E-Value=0.001) 25 8.0
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 73.3 bits (172), Expect = 3e-14
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 10 DCLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACLY 171
+CL P TGPCR F R+ Y+ + KC +F+YGGCQ N+NNFE+ ECE C +
Sbjct: 224 ECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKAECEKKCTH 277
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 65.7 bits (153), Expect = 6e-12
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACL 168
C +P GPCR ++ Y+ +C+ FIYGGC N NNF+T EC++AC+
Sbjct: 25 CKMPAAAGPCRAAMPQWYYNFKRHRCIRFIYGGCGGNPNNFDTKNECKSACM 76
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 64.5 bits (150), Expect = 1e-11
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
C+L TGPCRG F ++ Y ++++ C EF+YGGC NAN F++ EC C
Sbjct: 502 CVLENATGPCRGAFPKWYYSTADNACHEFLYGGCGGNANKFDSKSECLEVC 552
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 61.3 bits (142), Expect = 1e-10
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
C LP TGPC F R+ YD +C F YGGCQ NANNFE+ C C
Sbjct: 626 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKAACLKKC 676
Score = 52.8 bits (121), Expect = 5e-08
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACL 168
C LP + G C G Y ++S+ C +F Y GC+ NAN F T+ +C+ C+
Sbjct: 682 CDLPAEAGSCDGHMPLYFHNSTSGLCEKFHYSGCEGNANRFPTMRKCQRKCM 733
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACLYNTCECSC 192
CL P G + Y++++ C F+Y G N NNF+ + C+ AC+++ E +
Sbjct: 205 CLQPSLIGTGFAFKVHFFYNAAKRLCEPFVYSGMGGNKNNFKDKDACQRACMHSEVERNK 264
Query: 193 P*LYMVIINY 222
+VI NY
Sbjct: 265 CQQMVVIKNY 274
>SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)
Length = 65
Score = 54.4 bits (125), Expect = 2e-08
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
C L + GPC+ R+ ++ + +C EFIYGGC N N F T EC+ C
Sbjct: 12 CGLKVDPGPCKAYMPRFYFEIEKKECQEFIYGGCGGNENRFFTKRECQRIC 62
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 54.0 bits (124), Expect = 2e-08
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACL 168
C LP+ G CR + Y+ + +C+ F YGGC N N F+T + CE C+
Sbjct: 2054 CNLPMSVGRCRALMWMWYYNKKKGRCIRFAYGGCGGNPNRFKTKKACERRCM 2105
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 53.2 bits (122), Expect = 3e-08
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACLYNTC 180
C LP GPC R+ Y++ KC F++GGC N NNF+T + +Y C
Sbjct: 1234 CKLPKFAGPCMASIERFYYNAKIGKCQSFVFGGCLPNGNNFKTRKAYGTLAVYYPC 1289
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
CLL +TG C R+ YD++ KC F+Y GC N NNF ++C C
Sbjct: 3156 CLLRSRTGSCSRFTVRWFYDTNRGKCAPFVYTGCGGNENNFMNEQKCLETC 3206
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 49.2 bits (112), Expect = 6e-07
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 13 CLLPIKTGPCRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAACL 168
C LP++ G CR + Y+ +C F YGGC N N F + +C+ C+
Sbjct: 2122 CSLPLRPGRCRARMVMWFYNKRTGRCQTFNYGGCGGNGNRFRSRRQCQRRCV 2173
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 45.2 bits (102), Expect = 9e-06
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 40 CRGGFRRYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
C +++++S +C + Y GC N NNF+T EEC+ C
Sbjct: 2382 CTSHLPKFSFNSQTGQCQQLAYNGCLGNLNNFDTAEECQNTC 2423
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 39.9 bits (89), Expect = 3e-04
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 58 RYAYDSSEDKCVEFIYGGCQANANNFETIEECEAAC 165
R+ +D + C F+Y GC N N F T +CEA C
Sbjct: 228 RWYFDKAAGICKPFVYSGCGGNTNRFVTKRKCEAFC 263
>SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -3
Query: 284 LITFILFHKLQNYHHH-----KPTLP*LIITIYN*GHEHSHVLYRQAASHSSIVS 135
LI ++ H+L ++HHH +LP L I I H H YR AS S++ S
Sbjct: 286 LIITVIMHRLHHHHHHHYRHYASSLPSLCIIIIITVIMHHHHHYRHYASSSTLPS 340
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -3
Query: 287 LLITFILFHKLQNYHHHK-----PTLP*LIITIYN*GHEHSHVLYRQAASHSSIVS 135
++I ++ H +Y H+ P+L +I TI H H YR AS SSI S
Sbjct: 144 IIIITVIMHHHHHYRHYASSSSLPSLCIIITTIIITVMMHHHHHYRHDASSSSIPS 199
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 30.3 bits (65), Expect = 0.28
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Frame = +1
Query: 40 CRG-GFRRYAYDSSEDKCVEFIYGGCQ---ANANNFETIEECEA-ACLYN----TCECSC 192
CRG G +R S+E C + GCQ +N N + +EC+ +C +N TCE SC
Sbjct: 143 CRGVGCKRMQCASAES-CNQDCTRGCQLDCSNENTADCTQECKTGSCSFNCAAQTCESSC 201
>SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 375
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 53 SEDMPTIHRRTNALNSSTEVAKRMLIILRL*KSAKQPACTIRAS 184
S+D P I + N N + ++ K +L I +L A C+I S
Sbjct: 33 SQDNPDIVQCVNITNCTQDIKKHLLFIAKLRSKAAFGQCSILVS 76
>SB_16540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 SSEDKCVEFIYGGCQANANNF--ETIEECEAACLYNTCEC 186
+ E KC +YG + N N++ E C +++C C
Sbjct: 72 TGEAKCTANVYGFSKGNTNDYYDEWCHNNNYICDFDSCSC 111
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 112 CQANANNFETIEECEAACLYNTC 180
C +A ++ + EC+A C+ N C
Sbjct: 671 CSRDATDWYNLGECDAPCVNNPC 693
>SB_44717| Best HMM Match : 7tm_1 (HMM E-Value=0.001)
Length = 400
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 176 VLYRQAASHSSIVSKLLAFAW 114
+LY S SS+V KLLA W
Sbjct: 151 ILYPMKLSSSSLVKKLLATTW 171
>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 105 VDEFNAFVLR*IVGISSETAPARARL 28
V EF+ FV R +V +S++TAP L
Sbjct: 7 VKEFDKFVNRGVVPLSAQTAPTDKNL 32
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 115 QANANNFETIEECEAACLYNTCECSCP 195
++N+NN ++ +AAC N+CEC P
Sbjct: 1248 RSNSNNSN--KDKKAACGLNSCECLLP 1272
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,029,676
Number of Sequences: 59808
Number of extensions: 171689
Number of successful extensions: 384
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 326952314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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