Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10i01
         (295 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   0.59 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   1.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   4.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   4.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   7.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 0.59
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 263 HKLQNYHHH 237
           H LQN+HHH
Sbjct: 142 HHLQNHHHH 150


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 48  RFPKICLRFIGGQMR 92
           R  K+C++ IGGQ++
Sbjct: 268 RMNKLCIQTIGGQIK 282


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 208 PYIIKDMNTRTYCT 167
           PY+I  MNT T+ T
Sbjct: 28  PYVIGLMNTMTHTT 41


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 208 PYIIKDMNTRTYCT 167
           PY+I  MNT T+ T
Sbjct: 27  PYVIGLMNTMTHTT 40


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 226 NVGLWWW*FCN 258
           N G+W W  C+
Sbjct: 410 NAGMWMWLSCS 420


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 227  MLVYGGGNFAI 259
            MLVY GG+F +
Sbjct: 1061 MLVYEGGHFYV 1071


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,384
Number of Sequences: 438
Number of extensions: 1735
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)