Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10h23
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 490 Q*VH*FIV*LEQNSCIMNVTVVGYMNV 570
           Q VH F++ +E+N  IMN+   GY NV
Sbjct: 362 QEVHMFLMAIEKNPPIMNLN--GYANV 386


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 490 Q*VH*FIV*LEQNSCIMNVTVVGYMNV 570
           Q VH F++ +E+N  IMN+   GY NV
Sbjct: 362 QEVHMFLMAIEKNPPIMNLN--GYANV 386


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 500 WTYWSILFTIINTCLRRNQHHDHSIK 423
           W++  ++  I+  CL   + HD SIK
Sbjct: 322 WSFALLITRIVCLCLFGAKVHDESIK 347


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 198 AVNIPAKPKDSNYCI 154
           A N P  PKD   C+
Sbjct: 93  AANCPPSPKDDEKCL 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,675
Number of Sequences: 336
Number of extensions: 2774
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)