Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10h19
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.44
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.77
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 0.77
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 30 1.8
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 2.3
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 2.3
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 2.3
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 2.3
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 3.1
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.4
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 5.4
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 5.4
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 5.4
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.1
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 7.1
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.1
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 7.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 7.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 7.1
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 7.1
AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical ... 28 7.1
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 7.1
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 27 9.4
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 27 9.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 9.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 9.4
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 27 9.4
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 27 9.4
AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 438 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTP 617
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 618 SNTT 629
+TT
Sbjct: 467 PSTT 470
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 137 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 250
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 228 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 49
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 48 S 46
S
Sbjct: 136 S 136
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 191 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 361
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 362 TVKLINKRDHHALKLI 409
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 228 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 49
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 48 S 46
S
Sbjct: 136 S 136
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 447 PKTKPARKSPGSLPPCWKTTE--YTSRSCPPKTNST*SSITRKVLVMTVSSTVIA 605
PKT+P P ++P CW+ + PP+ N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 501 TTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 629
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 485 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 628
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 223 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVISSWCKCGVRSQRTHGEDEG 59
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 215 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 344 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 499
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 500 NNRVYFKIMSTEDK 541
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 344 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 499
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 500 NNRVYFKIMSTEDK 541
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 131 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 310
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 311 IV--KSYFPIQFRVI 349
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
protein F37D6.1 protein.
Length = 1227
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -1
Query: 574 RTFRVIELQVLFVFGGHDLEVYSVVFQHGGKLPGDFLAGFVFGVTECNFVVVLLVDQLEG 395
R F +E+ + + G ++ HGGK+PG T C++ L+ D++ G
Sbjct: 273 RVFEGLEMAITSIDGADRTNFIQLIEDHGGKVPG------TMSKTRCSY---LISDKITG 323
Query: 394 VMVPFVYELDSL 359
V E S+
Sbjct: 324 VKYAKAVEWKSM 335
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 95 ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK 259
AT +P + L ++ +V G E +A + EKK EV+ + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3825 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3879
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 3880 LITTTPTNSSLHIGRLENSHA 3900
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 513 TSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 638
TS PP TNS+ S++ V+ ++S+ + L + T TL
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTL 264
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3778 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3832
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 3833 LITTTPTNSSLHIGRLENSHA 3853
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 4022 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4076
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 4077 LITTTPTNSSLHIGRLENSHA 4097
>AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical
protein F38A1.4 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 229 FLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVIS 113
F+ + LLF+ + F + F NDD I+ LC +S
Sbjct: 13 FISQMCLLFILLVFLFYTDKVCFDNDDKEIKGLCYKFVS 51
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 155 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
IG+ + A S+ LK +GE+ K A K +IE + W KDGKEI KS F
Sbjct: 3794 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3848
Query: 335 QFRVIFTEQTVKLINKRDHHA 397
T ++ + + HA
Sbjct: 3849 LITTTPTNSSLHIGRLENSHA 3869
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 140 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 226
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 270 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 298
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 185 CSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
C+E +K+KK +V +A+KRL++ ++KDG
Sbjct: 436 CAERMKDKKPKVRIQAIKRLMDLYNHVMTSSPQPFFSKDG 475
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 140 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 226
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 271 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 299
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 471 SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 638
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 471 SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 638
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 471 SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 638
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 185 CSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
C+E +K+KK +V +A+KRL++ ++KDG
Sbjct: 436 CAERMKDKKPKVRIQAIKRLMDLYNHVMTSSPQPFFSKDG 475
>AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical
protein K07H8.8 protein.
Length = 347
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 275 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKD 454
FA Q W D K +K+ IQ+ TE+ + N + + ++N N++ SK
Sbjct: 244 FAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVREELSKG 303
Query: 455 KTSKKVS 475
KT S
Sbjct: 304 KTQHSTS 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,700,241
Number of Sequences: 27780
Number of extensions: 348205
Number of successful extensions: 1465
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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