Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10h17
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.23 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 269 VLYNEDRPCPRDCI 310
           VL NED PC R C+
Sbjct: 36  VLLNEDNPCARKCV 49


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 114  TTWGQGPGSYYCSWQHARWY 173
            T+W  G  + Y  WQ   W+
Sbjct: 1356 TSWNPGSTTNYPEWQPTEWH 1375


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 224 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 361
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 205 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 250


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 224 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 361
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 205 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 250


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 224 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 361
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 525 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 570


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 81  ITVTLDFWNLALRSSDVLTRSMKEKQ 4
           +   LDF  LAL  S +LT   K++Q
Sbjct: 66  VQTCLDFLLLALNISTILTTVRKQQQ 91


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 33  HRYYAVQDSKNQV*P 77
           H++Y+ + S+NQV P
Sbjct: 481 HQFYSSESSQNQVAP 495


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 33  HRYYAVQDSKNQV*P 77
           H++Y+ + S+NQV P
Sbjct: 429 HQFYSSESSQNQVAP 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,317
Number of Sequences: 336
Number of extensions: 2975
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)