Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10h14
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   8.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.2  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -2

Query: 184 LLSLRI*PAKNSPLAHPPTFGRIIEPSAGQLAITKSLAVSKFSIFKSYLIAANCCRVLK 8
           +L L +    +SP  +PP    I EPS     ++ S + +      SY      CR  K
Sbjct: 14  VLDLCVRKRPHSPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSSNSYTPKIKSCRPFK 72


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 231 GESSLASLTHHTRTFHCCLYGFDPQRTVHWP 139
           G+  L SL  +  T H    G +P+R + +P
Sbjct: 142 GQIMLNSLHKYKPTVHLVRVGTEPRRVISFP 172


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 293 VRGISHAAVENSPSW 249
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 293 VRGISHAAVENSPSW 249
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 155 EQSIGPSTDIWEDNRTECRPI 93
           EQS+ P T   +D ++E  P+
Sbjct: 202 EQSLSPDTVFGDDGKSEDVPV 222


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 122 EDNRTECRPISHYEISSCIQIFH 54
           E +RT  RPI+  EI   +QI H
Sbjct: 182 EQSRT--RPITPKEIERMVQIIH 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,027
Number of Sequences: 336
Number of extensions: 4568
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)