Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10h12
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QQ27 Cluster: IP09353p; n=1; Drosophila melanogaster|...    38   0.15 
UniRef50_Q9EMQ1 Cluster: AMV148; n=1; Amsacta moorei entomopoxvi...    38   0.27 
UniRef50_Q2EGT1 Cluster: Putative uncharacterized protein; n=3; ...    36   1.1  
UniRef50_Q9VTA1 Cluster: CG14151-PA; n=3; Sophophora|Rep: CG1415...    35   1.4  
UniRef50_Q9PK94 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_A0FVB2 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q9VI80 Cluster: CG14608-PA; n=2; Sophophora|Rep: CG1460...    35   1.9  
UniRef50_Q8MZ67 Cluster: AT28918p; n=1; Drosophila melanogaster|...    35   1.9  
UniRef50_Q8IP43 Cluster: CG31733-PB, isoform B; n=1; Drosophila ...    35   1.9  
UniRef50_A1Z9K9 Cluster: CG13353-PA; n=2; Sophophora|Rep: CG1335...    34   3.3  
UniRef50_A6F4I5 Cluster: Flagellar biogenesis protein; n=1; Mari...    33   4.4  
UniRef50_Q7QB20 Cluster: ENSANGP00000013305; n=1; Anopheles gamb...    33   4.4  
UniRef50_A3GFH7 Cluster: Predicted protein; n=2; Pichia stipitis...    33   5.8  
UniRef50_Q2GQ45 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q4QQ27 Cluster: IP09353p; n=1; Drosophila
           melanogaster|Rep: IP09353p - Drosophila melanogaster
           (Fruit fly)
          Length = 144

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
 Frame = +2

Query: 131 KKCCYCFPLRIGCFILGYLTMFTNVYNTGLLITL--TNYIGAGSHSFDRTTSFDSIDLEE 304
           KKCC+  PL +GC I+G + +    ++ G LIT   T +I   SH +        I    
Sbjct: 4   KKCCFFLPLNVGCIIIGAIFI---TFHVGELITSDDTIFIKQVSHKWWAPVIMSPILTIG 60

Query: 305 LSEPTTTLQPAQQSSESPLLSGVGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYV 484
                  +  A +S         GFVL+  I+      L  +  VV L R +P  I   V
Sbjct: 61  TLSSILLVYAASKSKR-------GFVLMWIIIYAIILSLYFLMAVVQLARSKPSPIILAV 113

Query: 485 LFAACRLVLVFAGLVYLTMTI 547
                  V +  GLVY  + +
Sbjct: 114 ------QVFIIVGLVYSLLIV 128


>UniRef50_Q9EMQ1 Cluster: AMV148; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV148 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 156

 Score = 37.5 bits (83), Expect = 0.27
 Identities = 16/85 (18%), Positives = 43/85 (50%)
 Frame = +2

Query: 380 VLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVYLTMTITTPA 559
           ++ + I+ +   + +NI  ++G+++R    IK+Y++++    ++    L++    I    
Sbjct: 60  IVTIEIISSIISIFINILLLIGIYKRNTNFIKYYIIYSYVLTLIYILNLLFYLYYILYTG 119

Query: 560 LMLHGLDIAVXSYFITVYNTYARQL 634
           ++L    I    YF+ +  +Y  +L
Sbjct: 120 IVLFIAIILFNIYFLVIIRSYYYKL 144


>UniRef50_Q2EGT1 Cluster: Putative uncharacterized protein; n=3;
           Euteleostomi|Rep: Putative uncharacterized protein -
           Ictalurus punctatus (Channel catfish)
          Length = 127

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = +2

Query: 356 PLLSGVGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVYL 535
           P+    G  +++ + + A W   N A +    +  P    F V+FA+  L+ +F G++  
Sbjct: 1   PIGMFTGAAVVVAVFLGAVWAADNKAIIKNFKKDNPALFVFLVIFASYLLMSLFGGVMVF 60

Query: 536 TMTITTPALML 568
            + I  P +++
Sbjct: 61  LLGIKLPLILI 71


>UniRef50_Q9VTA1 Cluster: CG14151-PA; n=3; Sophophora|Rep:
           CG14151-PA - Drosophila melanogaster (Fruit fly)
          Length = 196

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +2

Query: 386 LMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVY-LTMTIT 550
           L+ ++    W+++ I  + G++RR+ G ++F+++F    ++L    L+Y LT+ I+
Sbjct: 44  LVALIFTIFWMVIIIVLMAGIYRRKLGLVRFWLVFTCLGILLDGFILLYGLTLAIS 99


>UniRef50_Q9PK94 Cluster: Putative uncharacterized protein; n=1;
           Chlamydia muridarum|Rep: Putative uncharacterized
           protein - Chlamydia muridarum
          Length = 158

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 359 LLSGVGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLV 508
           +L G+G ++L+ IVI + W++  + C +G   RR  NI  Y     C+ +
Sbjct: 111 MLGGLGILMLLAIVILSIWVVSELLCSLG---RRAANIIHYCSARQCKTI 157


>UniRef50_A0FVB2 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia phymatum STM815|Rep: Putative
           uncharacterized protein - Burkholderia phymatum STM815
          Length = 308

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +2

Query: 347 SESPLLSGVGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFY-VLFAACRLVLVFAG 523
           S  PLL+ +    +   V+ A WL+     V+GLH  RP  ++    +         FAG
Sbjct: 42  SSVPLLALLWVRYVFQTVVLAIWLMRRP--VIGLHGARPFRLQLLRAILLLLNSASTFAG 99

Query: 524 LVYLTMTITTPALML 568
           L YL + +TT   ML
Sbjct: 100 LRYLPLPVTTSLAML 114


>UniRef50_Q9VI80 Cluster: CG14608-PA; n=2; Sophophora|Rep: CG14608-PA
            - Drosophila melanogaster (Fruit fly)
          Length = 1114

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 23/59 (38%), Positives = 30/59 (50%)
 Frame = +2

Query: 158  RIGCFILGYLTMFTNVYNTGLLITLTNYIGAGSHSFDRTTSFDSIDLEELSEPTTTLQP 334
            R G     Y T  T  Y T   +  T  +GAG  S++ TT F+ I +E+L E TTT  P
Sbjct: 1031 RGGAAAAEYFTSTTPGYTTTTDLPTTTGLGAG--SYEETTKFE-IRVEDLEEATTTTAP 1086


>UniRef50_Q8MZ67 Cluster: AT28918p; n=1; Drosophila
           melanogaster|Rep: AT28918p - Drosophila melanogaster
           (Fruit fly)
          Length = 133

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 131 KKCCYCFPLRIGCFILGYLTMFTNVYNT 214
           KK CYCF LRIG F + Y  +  +V +T
Sbjct: 5   KKFCYCFSLRIGAFSIAYAGLTMDVLDT 32


>UniRef50_Q8IP43 Cluster: CG31733-PB, isoform B; n=1; Drosophila
           melanogaster|Rep: CG31733-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 208

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 131 KKCCYCFPLRIGCFILGYLTMFTNVYNT 214
           KK CYCF LRIG F + Y  +  +V +T
Sbjct: 5   KKFCYCFSLRIGAFSIAYAGLTMDVLDT 32


>UniRef50_A1Z9K9 Cluster: CG13353-PA; n=2; Sophophora|Rep:
           CG13353-PA - Drosophila melanogaster (Fruit fly)
          Length = 260

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 131 KKCCYCFPLRIGCFILGYLTMFTNVYNTGLLIT 229
           KKCC+  PL +GC I+G + +    ++ G LIT
Sbjct: 4   KKCCFFLPLNVGCIIIGAIFI---TFHVGELIT 33


>UniRef50_A6F4I5 Cluster: Flagellar biogenesis protein; n=1;
           Marinobacter algicola DG893|Rep: Flagellar biogenesis
           protein - Marinobacter algicola DG893
          Length = 157

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = +2

Query: 359 LLSGVGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVYLT 538
           L  GVG + ++ I+   AW++  ++ + G + R    +    +    R+ LV  G   + 
Sbjct: 47  LTLGVGLLAVIAIIFGCAWIVRRMSGMTGGNTRAIKVVSVMPMGTRERIALVEVGDKQIL 106

Query: 539 MTITTPAL-MLHGLDIAVXSYFITVYNTYARQLE 637
           + +T  A+  LH  D  V S    V + +AR+L+
Sbjct: 107 IGVTPSAIRTLHVFDEPVVSAGEPVSSDFARKLQ 140


>UniRef50_Q7QB20 Cluster: ENSANGP00000013305; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013305 - Anopheles gambiae
           str. PEST
          Length = 477

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = +2

Query: 209 NTGLLITLTNYIGAGSHSFDRTTSFDSIDLEELSEPTTTLQPAQQSSESPLLSGV 373
           N  +L TLT+  GAGS +   T++  ++ +E  SE    + P   SS SPLLS V
Sbjct: 334 NYDILKTLTDGDGAGSTAAATTSALTALPVEAKSEIKGEINPT-NSSSSPLLSPV 387


>UniRef50_A3GFH7 Cluster: Predicted protein; n=2; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 1071

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 135 FLPKLEVDDNVL*GIGLVILSKFGMF*IRTDSYNVWRREW-LPRYC 1
           FL + ++   +  G+G  ++S F       +++N+WR EW L  YC
Sbjct: 680 FLRRTDIQFGIRVGLGAFVISLFAFLPQTKETFNMWRGEWALAIYC 725


>UniRef50_Q2GQ45 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 219

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 152 PLRIGCFILGYLTMFTNVYNTGLLITLTNYIGA--GSHSFDRTTSFDSIDLEELSEPTTT 325
           PL  G  I G L MFTN   TGL ++ T        + + D  T+F  + +  L++ TTT
Sbjct: 142 PLMAGTSIDGTLPMFTNSTTTGLPLSYTATTSPIHNTWTTDGLTTFIHLAIGALAQATTT 201

Query: 326 LQP 334
             P
Sbjct: 202 TPP 204


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,492,538
Number of Sequences: 1657284
Number of extensions: 11667780
Number of successful extensions: 33407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33398
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)