BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmmt10h11 (666 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering In... 25 2.1 AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 23 6.5 AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 23 6.5 AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 23 6.5 AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 23 6.5 AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 23 6.5 AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 6.5 AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 23 6.5 AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 23 8.7 AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 23 8.7 AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 23 8.7 AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 23 8.7 AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 23 8.7 >AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering Institute proto-oncogeneproduct protein. Length = 358 Score = 25.0 bits (52), Expect = 2.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -3 Query: 571 RTCNISFNNFNWRGIV 524 RTC+ FN+ NWR + Sbjct: 280 RTCHWGFNSSNWRSYI 295 >AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. Length = 287 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 23 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 57 >AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. Length = 287 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 23 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 57 >AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. Length = 287 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 23 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 57 >AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. Length = 287 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 23 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 57 >AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. Length = 287 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 23 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 57 >AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion protein protein. Length = 1881 Score = 23.4 bits (48), Expect = 6.5 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -1 Query: 660 DLEVSSTIRRVELPEYIIIFSFDNWTFGTTVPVTSLLIILIG 535 D + S ++ E+ E + W F T + + +LLI++IG Sbjct: 1712 DTQASELVQTAEMDELSVNII---WLFVTNILLGALLIVVIG 1750 >AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. Length = 576 Score = 23.4 bits (48), Expect = 6.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 193 DYSSLRLL*VGGEGIKTSQDLESMAFSIIHMRCDI 297 D+S L + +GG I+ S + +I+H R D+ Sbjct: 250 DFSRLSAMGLGGNTIQCSCNYVKFLRNILHNRTDV 284 >AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. Length = 189 Score = 23.0 bits (47), Expect = 8.7 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = -2 Query: 470 SLPNHQIYHCWLYLDWLNN*Y 408 +LPN I + W+Y+ + N Y Sbjct: 85 ALPNGTIIYYWVYVQFANEGY 105 >AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. Length = 189 Score = 23.0 bits (47), Expect = 8.7 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = -2 Query: 470 SLPNHQIYHCWLYLDWLNN*Y 408 +LPN I + W+Y+ + N Y Sbjct: 85 ALPNGTIIYYWVYVQFANEGY 105 >AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. Length = 189 Score = 23.0 bits (47), Expect = 8.7 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = -2 Query: 470 SLPNHQIYHCWLYLDWLNN*Y 408 +LPN I + W+Y+ + N Y Sbjct: 85 ALPNGTIIYYWVYVQFANEGY 105 >AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. Length = 187 Score = 23.0 bits (47), Expect = 8.7 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = -2 Query: 470 SLPNHQIYHCWLYLDWLNN*Y 408 +LPN I + W+Y+ + N Y Sbjct: 85 ALPNGTIIYYWVYVQFANEGY 105 >AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. Length = 189 Score = 23.0 bits (47), Expect = 8.7 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = -2 Query: 470 SLPNHQIYHCWLYLDWLNN*Y 408 +LPN I + W+Y+ + N Y Sbjct: 85 ALPNGTIIYYWVYVQFANEGY 105 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 638,838 Number of Sequences: 2352 Number of extensions: 12732 Number of successful extensions: 33 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 66486645 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -