Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10h11
(666 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 31 1.1
BT011139-1|AAR82807.1| 514|Drosophila melanogaster GM02553p pro... 30 3.3
AE013599-2468|AAF57863.2| 511|Drosophila melanogaster CG6530-PA... 30 3.3
AE013599-2467|AAF57864.4| 480|Drosophila melanogaster CG6536-PA... 30 3.3
AE013599-2466|AAO41361.1| 517|Drosophila melanogaster CG6536-PB... 30 3.3
AE014134-1592|AAF52735.1| 275|Drosophila melanogaster CG17906-P... 29 5.7
AY069549-1|AAL39694.1| 434|Drosophila melanogaster LD27553p pro... 29 7.5
AE014297-671|AAF54165.2| 434|Drosophila melanogaster CG2678-PA ... 29 7.5
AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant nucle... 28 9.9
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 28 9.9
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 419 LTSPNITNSDIFDDSEATGIANETTVTDSNDVVKDNYTAPIKIIKR 556
+T P T S I D+ T + +TTV+D + ++K KI+K+
Sbjct: 1789 ITEPLNTTSAITTDNNQTVSSEQTTVSDDSGLIKTTVIRTTKIVKK 1834
>BT011139-1|AAR82807.1| 514|Drosophila melanogaster GM02553p
protein.
Length = 514
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 161 CKL*ISKKDEMTILLYDYCELEERASKHLKTWKAWHLVLYICAAIFGVVNYVFLQHTMKL 340
C +S KD+ + +C L +S+H +TWK +V+ + I + Y++++ L
Sbjct: 189 CVQHLSFKDDSIRIAPHFCPL---SSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNL 245
Query: 341 IDNNCVLYPRQLEFREIDVIINGTSY 418
+ Y L +++N Y
Sbjct: 246 HGKCFICYLASLFLGYFFLVLNVWKY 271
>AE013599-2468|AAF57863.2| 511|Drosophila melanogaster CG6530-PA
protein.
Length = 511
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 161 CKL*ISKKDEMTILLYDYCELEERASKHLKTWKAWHLVLYICAAIFGVVNYVFLQHTMKL 340
C +S KD+ + +C L +S+H +TWK +V+ + I + Y++++ L
Sbjct: 186 CVQHLSFKDDSIRIAPHFCPL---SSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNL 242
Query: 341 IDNNCVLYPRQLEFREIDVIINGTSY 418
+ Y L +++N Y
Sbjct: 243 HGKCFICYLASLFLGYFFLVLNVWKY 268
>AE013599-2467|AAF57864.4| 480|Drosophila melanogaster CG6536-PA,
isoform A protein.
Length = 480
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 161 CKL*ISKKDEMTILLYDYCELEERASKHLKTWKAWHLVLYICAAIFGVVNYVFLQHTMKL 340
C +S KD+ + +C L +S+H +TWK +V+ + I + Y++++ L
Sbjct: 183 CVQHLSFKDDSIRIAPHFCPL---SSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNL 239
Query: 341 IDNNCVLYPRQLEFREIDVIINGTSY 418
+ Y L +++N Y
Sbjct: 240 HGKCFICYLASLFLGYFFLVLNVWKY 265
>AE013599-2466|AAO41361.1| 517|Drosophila melanogaster CG6536-PB,
isoform B protein.
Length = 517
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 161 CKL*ISKKDEMTILLYDYCELEERASKHLKTWKAWHLVLYICAAIFGVVNYVFLQHTMKL 340
C +S KD+ + +C L +S+H +TWK +V+ + I + Y++++ L
Sbjct: 183 CVQHLSFKDDSIRIAPHFCPL---SSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNL 239
Query: 341 IDNNCVLYPRQLEFREIDVIINGTSY 418
+ Y L +++N Y
Sbjct: 240 HGKCFICYLASLFLGYFFLVLNVWKY 265
>AE014134-1592|AAF52735.1| 275|Drosophila melanogaster CG17906-PA
protein.
Length = 275
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 363 YNTQLLSISFI-VCCRKT*LTTPNIAAHMYNTKCHAF-QVLRCFD 235
Y T +LS+ V LT P +A +YN CHAF + FD
Sbjct: 122 YTTSVLSMLITTVFWAALSLTMPEVAGELYNLWCHAFNSICMVFD 166
>AY069549-1|AAL39694.1| 434|Drosophila melanogaster LD27553p
protein.
Length = 434
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 212 YCELEERASKHLKTWKAWHL-VLY---ICAAIFGVVNYVFLQHTMKLIDNNCV 358
YC E + KHLK + H+ L+ C+ +F VNY+ +H ++ NN +
Sbjct: 381 YCSEEFKTEKHLKRHERGHMGDLFRCEFCSLVFVDVNYL-RKHKKRIHSNNVI 432
>AE014297-671|AAF54165.2| 434|Drosophila melanogaster CG2678-PA
protein.
Length = 434
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 212 YCELEERASKHLKTWKAWHL-VLY---ICAAIFGVVNYVFLQHTMKLIDNNCV 358
YC E + KHLK + H+ L+ C+ +F VNY+ +H ++ NN +
Sbjct: 381 YCSEEFKTEKHLKRHERGHMGDLFRCEFCSLVFVDVNYL-RKHKKRIHSNNVI 432
>AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant
nucleotide excision repairprotein mus201 protein.
Length = 725
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +2
Query: 383 REIDVIINGTSYLTSPNITNSDIFDDSEATGIANETTVTDSNDVVKDNYTAPIKIIKRD 559
+ +++ ++ T S ++ +DIF+D EA I +V + ND ++ + +K+ D
Sbjct: 512 KNLEICVDITGQADSNDLF-ADIFEDGEANKIEKTISVEEDNDFIEVKGSEELKLDTED 569
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +2
Query: 383 REIDVIINGTSYLTSPNITNSDIFDDSEATGIANETTVTDSNDVVKDNYTAPIKIIKRD 559
+ +++ ++ T S ++ +DIF+D EA I +V + ND ++ + +K+ D
Sbjct: 512 KNLEICVDITGQADSNDLF-ADIFEDGEANKIEKTISVEEDNDFIEVKGSEELKLDTED 569
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,816,867
Number of Sequences: 53049
Number of extensions: 511914
Number of successful extensions: 1962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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